Shewanella japonica: SJ2017_2556
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Entry
SJ2017_2556 CDS
T04959
Name
(GenBank) Recombination protein RecR
KO
K06187
recombination protein RecR
Organism
sja
Shewanella japonica
Pathway
sja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SJ2017_2556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_2556
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SJ2017_2556
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SJ2017_2556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ARD22846
LinkDB
All DBs
Position
complement(3047015..3047614)
Genome browser
AA seq
199 aa
AA seq
DB search
MKFSPLVDELIESLRCLPGVGPKSAQRMAFQLLERNRKAGQKLANALERSMSEVGHCQAC
RTFTEQELCPICSSPKRGNAGVICVVETPADVLAIEAGGHFMGRYFVLLGHLSPLDGVGP
DELGLELLEQHLSSEDVTELILATNPTVEGDATAHFIADIARRHNVVISRIAHGVPVGGE
LEYVDSTTLALSFNGRIPL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtccgctagttgatgaattaattgaatcattacgttgcttacccggtgta
gggcctaagtctgctcagcgtatggcatttcagttattggaacgtaatcgtaaagcgggg
caaaaactggcaaacgctcttgagcgctctatgagtgaagtagggcattgccaagcgtgc
cgtacgtttactgaacaagaattatgcccaatttgcagtagccctaaacgaggaaacgct
ggcgttatatgtgtggtagaaacgcctgcagatgtacttgctatcgaagctggtggccat
tttatggggcgatactttgtgttattaggccatttgtcaccacttgatggcgtgggccct
gatgaactaggtcttgagttacttgaacagcatttatcttcagaagatgtcacagagtta
atcttggcaacaaaccctacagtagaaggtgatgcaacagcgcactttatcgcggatatc
gcacgtcgtcataatgtggttatcagccgtattgctcatggtgtgccagtaggtggcgag
cttgagtatgtcgatagcacgactttagcgttatcgtttaatgggcgcatccctctgtaa
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