KEGG   Streptomyces janthinus: RI060_11005
Entry
RI060_11005       CDS       T09385                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sjn  Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:sjn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sjn03016]
    RI060_11005 (truB)
Enzymes [BR:sjn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     RI060_11005 (truB)
Transfer RNA biogenesis [BR:sjn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RI060_11005 (truB)
 Prokaryotic type
    RI060_11005 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: WND17835
LinkDB
Position
complement(2468813..2469718)
AA seq 301 aa
MTQKHTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYLGTIRLGQNTLTDDAEGELTSSADASKVTRDAIDAGVAKLTGDIMQV
PSKVSAIKINGVRSYKRAREGEEFDIPARPVTVSSFGVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDAARTLDQHQQELAVMPIAEAAT
AAFPRWDVDARRAKLLTNGVRLEMPDEYAGSGPVAVFDPEGRFLALVEEQRGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagaagcacaccacgcccgacggcctcgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtcgtcgccaagatgcgcggcatcgccagaacacgacgcgtcgggcac
gccggcaccctcgacccgatggcgacgggcgtcctcgtcctcggcgtcgagaaggcgacc
aagctcctcggccacctcgcgctgacggagaaggagtacctgggcaccatccggctcggg
cagaacaccctcacggacgacgccgagggggagctcacctcctccgccgacgcctccaag
gtcacccgcgacgccatcgacgccggtgtcgccaagctgaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcaacggggtacggtcctacaagcgcgccagggag
ggcgaggagttcgacatcccggcccggcccgtcacggtctcctccttcggcgtgtacgac
gtcagggacgccgtcgccgaggacggcacgcccgtactcgacctggtcgtgtcggtcgtc
tgctcgtcgggtacgtacatccgggccctggcccgtgacctgggcgccgacctcggtgtc
ggcggtcatctcaccgccctgcgccgcacccgcgtcggcccgtacaagctggacgcggcc
cgcacgctcgaccagcaccagcaggaactggccgtgatgccgatcgccgaggccgcgacg
gccgccttcccgcggtgggacgtcgacgcccggcgggccaagctgctcaccaacggcgta
cggctggagatgcccgacgagtacgcgggctccggccccgtcgccgtcttcgacccggag
ggccgcttcctcgccctcgtcgaggagcagcggggcaaggccaagagcctggccgtcttc
ggctga

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