Streptomyces janthinus: RI060_34940
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Entry
RI060_34940 CDS
T09385
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RI060_34940 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_34940 (ruvB)
Enzymes [BR:
sjn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RI060_34940 (ruvB)
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RI060_34940 (ruvB)
RecFOR pathway proteins
RI060_34940 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
nSTAND3
Sigma54_activat
AAA_3
AAA_14
RNA_helicase
Sigma54_activ_2
AAA_28
TsaE
Zeta_toxin
AAA_19
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WND22234
LinkDB
All DBs
Position
7633818..7634912
Genome browser
AA seq
364 aa
AA seq
DB search
MNWDDTTDTSAAERLVGPAAERLVDSVADGEDQAVEAALRPKDLDEFIGQEKVREQLDLV
LRAARARGATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSL
QEGEVLFLDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRA
GLLPPPLRDRFGFTAHMEFYEPAELERVIHRSAHLLEVETEPEGAAEIAGRSRGTPRIAN
RLLRRVRDYAQVKADGLITKDIAAAALAVYEVDERGLDRLDRGVLEALLKLFGGGPVGLS
TLAVAVGEERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLTPPGSQTTGNGQQD
LFGA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggacgacacgaccgacacctccgccgccgagcggctcgtcgggcccgccgcg
gagcggctggtggactccgtcgccgacggtgaggaccaggctgtcgaggccgccctgcgc
cccaaggacctggacgagttcatcggccaggagaaggtccgcgagcagctcgacctcgtc
ctgcgcgccgcacgcgcgcgtggcgccaccgccgaccacgtgctgctctcgggcgccccc
ggcctcggcaagaccaccctgtcgatgatcatcgcggccgagatgggcgcccccatccgc
atcacgtcgggccccgccatccagcacgccggcgacctcgcggcgatcctctcctccctc
caggagggcgaggtcctcttcctcgacgagatccaccgcatgtcccggcccgccgaggag
atgctgtacatggccatggaggacttccgggtcgacgtcatcgtcggcaagggcccggga
gccaccgccatccctctggagctgcccccgttcaccctggtcggcgccaccacgcgagcg
ggattgctgccgcccccgctgcgcgaccgtttcggcttcaccgcccacatggagttctac
gaaccggccgaactggagcgggtcatccaccgctcggcccacctcctcgaggtcgagacc
gagccggagggcgccgccgagatcgccggccgctcccgcggcaccccccgcatcgccaac
cgcctgctgcgccgcgtccgggactacgcccaggtcaaggccgacgggctgatcaccaag
gacatcgcggcggccgccctcgccgtctacgaggtggacgagcggggcctcgaccgcctc
gaccgaggcgtcctggaagccctgctcaagctgttcggcggcggccccgtcggcctgtcc
acgctcgcggtcgcggtgggggaggagcgtgagaccgtggaggaggtggccgagcccttc
ctggtacgggaaggactgctggcccgcaccccgcgcggcagggtcgccacccccgccgca
tgggcgcatctcggcctcaccccgcccggctcccagaccaccggaaacggacaacaggac
ctgttcggggcgtga
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