Streptomyces janthinus: RI060_36145
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Entry
RI060_36145 CDS
T09385
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_36145
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RI060_36145
Archaeal homologous recombinant proteins
RI060_36145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
WND22459
LinkDB
All DBs
Position
7899862..7902867
Genome browser
AA seq
1001 aa
AA seq
DB search
MRLHRLTVTAFGPFGGTQAVDFDELSTAGLFLLHGPTGAGKTSVLDAVCYALYGSVPGAR
QGGGQGAALRSDHAAPATRTEVTLELTVAGRRLEVTRQPPWERPKKRGTGTTLDKAQTWL
REYDAKAAAWKDLSRSHQEIGEEVTQLLGMSREQFCQVVLLPQGDFARFLRADAEARGKL
LGRLFDTRRFADVEKRLAERRRATEAQVRDGDAALLADAHRMQQAAGDAMELPDLDPGEP
GLAEAVLGAAAVARSTVREQLTVADCTLTAAESAQAGAGRALDDVRELARLQRRFAEARE
RMARLEEGAEAYREAQARMERARKAEKVAPALDLRESADAEHRRAAAAEARARALLPESF
ADAGAAGLATAARRAAEELGGLDSARRAERRMVELLDERAGLDREERADADVLREAEDWL
DGWEETRAGLQARVDSAQHSASLAEQLAVRREPARQRLKAARRRDRLTLDTDEAVIRARD
AQERMLRAKQHWLDLKEQRLTGIAAELAAHLTDGEPCAVCGATEHPAPARKVAGHVDREA
EEQALAAYQRADEQRTADERLLGDVREALAAATAEAGDASTEQLSDEAEELEEQYEQSRR
GAAELHPARERLRQAGHEQERRVAARQEAAVRTAARVGHRERLDRERAGLEEELARARGT
LDSVAARAAQLERRTALLTDAADTARAAEDTAQRLKDADARLADAAFRAGFETPQAAADA
LLDDAVHRELQRRLDAWQTEEAAARAVLAEADTAAAARQRPADLESAERAASAADRRTRD
AASAHDAAARRCAELDRLSARVTASVHRLAPLREEYDRVARMAGLTAGTSADNERRMRLE
SYVLAARLEQVAAAATVRLRRMSSGRYTLVHSDDRTGRGRSGLGLHVVDAWTGRERDTAT
LSGGETFFASLALALGLADVVTDEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDSLRER
DRSVGIVSHVADLRRRIHAQLEVVKGRSGSVLRQRGIQGGL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcaccggctgacggtcaccgccttcggccccttcggaggcacccaggccgtc
gacttcgacgagctgtcgaccgccgggctgttcctgctgcacggaccgaccggcgcgggc
aagacgtccgtcctcgacgccgtgtgctacgccctgtacggctcggtgccgggcgcccgg
cagggcggcggacagggcgcggccctgcgcagcgaccacgccgcacccgcgacccgcacc
gaggtcaccctcgaactcaccgtcgccggacgccggttggaggtcacccgccagccgccc
tgggaacgtcccaagaaacgcgggaccggcacgacactcgacaaggcccagacctggctc
cgcgagtacgacgcgaaggccgcggcctggaaggacctcagccgctcccaccaggagatc
ggcgaggaggtcacccagctgctcggcatgagccgggagcagttctgccaggtcgtgctc
ctgccgcagggcgacttcgcccggttcctgcgcgccgacgccgaggcccggggcaagctg
ctcggccgcctcttcgacacccgccgattcgccgacgtcgagaagcgcctcgccgagcgg
cgccgtgccaccgaggcccaggtgcgcgacggggacgccgcgctgctggccgacgcgcac
cgtatgcagcaggccgcgggcgacgccatggaactgccggacctggatcctggcgaaccc
gggctggccgaggccgtgctgggcgccgccgccgtcgcccgcagcaccgtcagggaacag
ctcacggtcgccgactgcacgctcacagccgccgagtccgcgcaggccggcgctggccgc
gcgctcgacgacgtacgcgaactcgcccggctccagcggcggttcgccgaggcgcgggaa
cggatggcgcgcctggaggagggtgccgaggcgtaccgggaggcgcaggcgcgcatggag
cgggcccgcaaggccgagaaggtcgcgcccgctctggacctgagggagtccgccgacgcc
gaacaccggcgggctgccgccgccgaggcccgcgcgcgagccctgctgcccgagagcttc
gccgacgcgggcgcggccggactcgcgacggccgcacgccgggccgccgaggaactgggc
ggtctggactcggctcgccgtgccgagcgcaggatggtcgaactcctcgacgaacgcgcc
ggtttggaccgcgaggagcgcgccgacgcggacgtcctgcgggaggcggaggactggctc
gacggctgggaggagacccgtgccggtctccaggcccgggtggattccgcgcagcattcc
gcttccctcgccgaacagctcgccgtacggcgcgagcccgcgcggcagcggctgaaggcg
gcccggcggcgcgaccggctcaccctggacaccgacgaggccgtcatccgggcccgggat
gcacaggagcggatgctgcgggccaagcagcactggctcgacctcaaggaacagcgtctg
accggcatcgccgccgaactggccgcgcacctcaccgacggcgagccctgtgccgtctgc
ggtgccaccgaacaccccgcccccgcccgcaaggtcgccgggcacgtcgaccgcgaggcc
gaggaacaggccctggccgcctaccagcgcgccgacgaacagcgcaccgcggacgaacgg
ctgctgggcgacgtacgggaggcgctggcggcggccaccgccgaggccggtgacgcctcc
accgagcaactctccgatgaagccgaggagttggaggagcagtacgagcagtcccgccgt
ggcgccgccgagctgcaccccgcgcgggaacggctgcggcaggccgggcacgagcaggaa
cggcgcgtcgccgcccggcaggaggccgccgtgcggaccgccgcccgggtcgggcaccgg
gagcggctggaccgggaacgggccggcctggaggaggaactggcccgggcgaggggcacc
ctggacagcgtcgccgcgcgggccgcgcagctggagcggcggaccgcgctgctcacggac
gccgccgacaccgcccgcgccgccgaggacaccgcccagcggctcaaggacgccgacgcc
cggctcgccgacgccgccttccgcgccggcttcgagaccccgcaggccgcggccgacgcc
ctcctcgacgacgccgtccaccgcgagctgcaacggcggctggacgcctggcagaccgag
gaggccgccgcacgggccgtcctcgccgaggccgacaccgcggccgccgcccggcagcgg
cccgccgacctggagagcgcggagcgggcggcctccgccgcggaccggcggacccgcgac
gccgcctccgcacatgacgccgccgcccggcgctgcgccgaactcgaccggctgtccgcc
cgggtgaccgcctccgtgcaccgactggcgccgctgcgcgaggagtacgaccgggtcgcc
cgcatggccggcctcaccgccggcacctcggcggacaacgaacgccggatgcgcctggag
tcgtacgtcctggcggcccggctggaacaggtcgccgccgccgcgaccgtacggctgcgg
cgcatgtcgtccggccgttacaccctcgtccactccgacgaccgcaccgggcgcggccgc
agcggactcggactgcacgtcgtcgacgcgtggaccggccgcgagcgggacacggcgacg
ctgtcgggcggcgagacgttcttcgcctcgctggccctcgccctcggcctcgcggacgtc
gtcacggacgaggcgggcggcgtgcggctggacaccctcttcatcgacgagggcttcggc
agcctcgacgaccagaccctcgacgaggtcctcgacgtcctcgactccctgcgtgaacgc
gaccgcagcgtcggcatcgtcagccatgtggccgacctgcgacggcggatccacgcacag
ctggaggtcgtgaagggccggtccgggtcggtgctgcgacagcgcggcattcaggggggt
ttgtga
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