Scomber japonicus (chub mackerel): 128358656
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Entry
128358656 CDS
T09718
Name
(RefSeq) interferon-induced very large GTPase 1-like isoform X1
Organism
sjo
Scomber japonicus (chub mackerel)
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
RHD3_GTPase
ABC1
Dynamin_N
Kinase-like
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128358656
NCBI-ProteinID:
XP_053174978
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All DBs
Position
1:complement(40947428..41073233)
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AA seq
1788 aa
AA seq
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MSHPFIVQYKESFEDTSCLYIVMDYCEGGDLSKKIKSQKGKLFSEQQILDWFVQICLALK
HIHDRKILHRDIKPENIFLTKDGTVQLGDFGVARVLNRTGELATTHIGTPLYISPEICEN
KPYNNKSDIWALGCVLNEMCTLKPAFKAGNMGELCLKIIRGSYSPVSDHYSQELSSLLAL
LLDCDPEKRPSVSSILNRPFLCCRIQKFLTPQIIAQEFGPEEGVILGSAALFNFLSKLGL
QKFYPNKLTLHSLLEINKNNIYNDTVESLEKIPWCFLRKLFHINAECRNCTQVSTNDDDE
NSDLFDFDQLTTDDTVDNKVNPLDLIVALFHCADSFLQQEMALKMSMCQFSVPLLLPHGN
NSQSTLMLWALRDIVKEWRPQDLSESRGFVEDNIVQANIPFFTFVRLKNCSLSKSQVLNH
VLSCGQQNHKLFIHRDMEGGSLKRRIANGLVEVCWFLPCGREDLDIFPEPVAFANLRGDI
CESLEQFNFLVQESTSTFVFLDKVEEKEHKILTSLQDVKSKLFLVVNRKDSSKEDMMSVR
KTLKELQLPNSRVKVKDSRVNVAELLNKLCDAIKTSLSDVSATFNIVNMVGKAAELGLDV
DETTSGEQKKAVEEIMVDIERQSIPDYKKQQLPLQGENWKTLSQLEKDECRLKTGESGLE
EYKCQIQEGKDKIRKEQSKQNLSKGMKSFIKTISTSDKEKRDFFLKWMKLKLNAHSRSKL
SDLRNKLKEQCEKTDIKDIKLMERLDKDLLESFLGVEHYMREMGLIYEFSIDDSRNTADE
ISRLPGLAAEMLLDGFPLELLDGDASNIPERWVTDVLMELHKKVGEQSRLLVLTVLGVQS
TGKSTLLNTMFGVQFPVSSGRCTRGAYVLFLRVGEDMKRELNFDFIVLIDTEGLKSPDLA
ELEGSYEHDNQMATFVIGLSDVTIINIAMENLTEMKDILQIVAHAFLRMKDIGKKPVCHF
VHQNVSGVSAHAKNLTDRKHLLDQLNKMTQIAAEMEKNPSIKVFTDVLDYDMDKNNWNIP
GLWHGTPPMASVSTGYSAVLAELKKHLLETVKRNQSNQVSKIPEFLEWMRSLWKAVKYEN
FIFSFRNTLVARAYVNLCKEFSQWEWQFTKEILSWQQKAELEILNSDIEFDIQDWSTLVE
PKKSEVSKEIATEEGKMKEKLTNYYKRKDQNVNLIEKYKTDFFKSISSLTEEIRHSANNK
LDFVLELKKKSKQAQDILRKYREGIEDEVMKLLSACKGSTLSDDQLTHEFEKMWTEATKN
VSDLKEQDIAANILNQLRKNFSNRNVNENFQKIKDLKEFGKDPFKTSCDHLNSWLNKAES
VVRGLGDLQNFANGVIESCTRFVLDKGKTNTDYHDSFTRDLLEKMDESLQQSYKYHKTNA
KFEFDLKLHICGIASREFLKMHQKYLSDKDPQTQLQKHKSQYLTDFLDLYKQRDDCQRKA
KEFVQVCIKPAVEEFINRYLGIDIVDEIVTGSHSAEYSSRSFFQYNIHEELLQKDDFDSC
VKYICNYEIYVKDWIFQQIQKQMSEDKTLCKLKNKILQVIVDKITAALEQASKGPDGVQL
PDNIKSITELISNMQKYLIKDISISVEAEKTSLFQIQSTCHPFINSLKMSIEDLNKQLQE
EFLKSEDITETLNKLPIKPQDELFKRVFGCGKQCPFCKVPCEAGGKGHDKHHAALHRPQG
LGGCRNSNTKKLLPELCTTNVQSERTFRNSDTKWEPHPYKEYHTYYPDWNIPPDPSIEAS
DYWKYVLVRYNDRFAEEYKAEPADVPEAWRRITKEQALKGLKDAFNIK
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcccttcattgtccagtataaggaatcttttgaagacacgagctgtctgtat
attgtgatggactactgtgaaggaggagacctctccaagaagatcaagtctcagaaagga
aaacttttctcagaacagcaaatcttggactggtttgtgcagatttgtttggcactaaaa
cacatccatgatagaaaaatcctccacagagacatcaaaccagagaacatatttttgact
aaagatgggactgtacagcttggagactttggagttgcaagagtgctgaacaggactgga
gaactggcaacaacacacataggaacaccactttacatatcaccagagatctgtgagaac
aaaccatacaacaacaaaagtgatatttgggccctaggttgtgtcctgaatgaaatgtgc
actctaaagcctgcatttaaggctggcaatatgggggaactatgtctgaagatcatccgt
ggctcatactctcctgtgtctgatcactactcccaagaactgagctctctcttggctctg
ctgttggattgtgaccctgaaaagagaccctcagtcagcagcatactgaacagacctttc
ctctgctgcaggatacagaagttcctcacaccacagatcattgctcaggaatttggccct
gaagagggagtgatactggggtcagcagcccttttcaactttctctccaaacttggactg
cagaaattttatcccaacaagctcactcttcactctcttttggaaatcaacaaaaacaat
atttataatgatactgttgaatcattggagaaaataccatggtgctttctcaggaaactc
tttcatatcaacgcagaatgcagaaactgtacacaagtatcaaccaatgatgatgatgaa
aacagtgatctgtttgactttgaccagctcactacagatgacactgtagacaacaaggtt
aaccctctggacctcatagttgcactctttcattgtgctgacagcttcttgcaacaggaa
atggccctcaagatgtcaatgtgtcagttttctgtcccactgctgttgcctcatggcaat
aacagtcagtctactctgatgctgtgggctctgagagacatcgtcaaagagtggcgtcca
caggatttgtctgaatcaagaggatttgttgaagacaacattgttcaagcaaatatacca
ttctttacctttgtcaggctgaaaaactgtagtctctccaagtcacaggttttgaatcat
gttctcagttgtggccaacagaatcacaagttgttcatacacagagatatggaaggagga
agtcttaaaagaagaatagccaatggtttggtggaggtttgctggttccttccctgtggc
agagaagatcttgacatatttccagagccagttgcctttgccaatttgagaggagacatt
tgtgagtcactggaacaattcaattttcttgttcaagagtcaacttctacctttgtgttc
ctggacaaagtagaagaaaaagagcacaagattctgacttctcttcaagatgtgaaatcc
aaactcttcttggttgttaatcggaaggacagctctaaagaggacatgatgtctgtgagg
aaaacactaaaagagttacagctaccaaatagcagagtgaaagttaaagactcaagggta
aatgtagcagagttgttaaataaactttgtgatgctatcaagacctcactgtcagatgta
tcagccacattcaacattgttaatatggttggaaaagctgctgagcttggtctggatgtg
gatgaaaccacaagtggtgaacaaaagaaagcagttgaggagatcatggttgatattgag
aggcagagtataccagactacaagaaacaacaacttcctttgcagggagaaaactggaaa
acattatcacagttagagaaagatgagtgtagattgaaaactggtgagtcaggccttgaa
gaatacaaatgccagatacaggaaggaaaagataaaattaggaaggagcaaagcaaacaa
aatctttccaaaggaatgaagagttttattaaaaccatttccacaagtgacaaagagaaa
agagatttttttctcaagtggatgaaactcaaacttaatgcacattcacggagcaaactg
tctgatctgcgcaacaaattaaaagagcaatgtgagaaaacagacatcaaagacatcaaa
ctcatggaaaggttagataaagatttgctggaaagcttcctaggagtagagcattacatg
agagagatgggactcatctatgagttctcaattgatgactcaagaaacactgctgatgaa
atatctcgtctccctggtttggctgctgaaatgctgttggatggatttcctttagagctc
ttggatggagatgcttccaacatcccagagagatgggtgacagatgtgctgatggagctt
cacaagaaggttggagaacagagcagactgttagtactgactgtgctgggtgttcaaagt
acagggaagtcaacactcctcaacaccatgtttggtgtgcagtttcctgtcagcagcggc
agatgcacaagaggagcttatgtgctcttcctcagagttggagaagatatgaaacgtgag
ttgaactttgattttatagttctcattgacacagagggtctaaagtctcctgatctggca
gaactagaaggcagttatgagcatgacaaccagatggcaacatttgtgattggtttaagt
gacgtcaccattattaacattgcaatggagaatttaacagaaatgaaagacattctgcaa
attgtagctcatgctttcctgagaatgaaggacattggtaaaaagccagtttgtcatttt
gtgcatcaaaatgtttctggagtttcagctcatgcaaagaacctcacagacagaaagcat
ctcttggatcagctcaataaaatgacacaaattgctgctgaaatggaaaagaatccttct
attaaagtatttacagatgtgctggactatgacatggacaaaaacaactggaacatccca
ggactctggcatggaacccctccgatggcatcagtgagcacaggttacagtgcagtttta
gcagaattaaagaaacatcttttggagacagtaaaaagaaaccaaagcaatcaagtctca
aagatcccagagtttctagaatggatgagaagtctctggaaagctgtgaaatatgagaac
ttcatctttagtttcagaaacactcttgtagcccgtgcctatgttaatctgtgcaaagag
ttcagtcaatgggaatggcagttcacaaaagaaatcctctcctggcaacaaaaagcagag
ttggaaatcttgaattctgacattgaatttgatattcaagattggagcacactggttgaa
ccaaaaaaatcagaggtgtcaaaagaaatagcaactgaagaaggaaaaatgaaggagaaa
ctcaccaactactacaaaaggaaagaccagaatgtaaatctgatagaaaaatacaaaact
gactttttcaaaagtatcagtagtcttaccgaggaaatcagacattcagcgaacaataaa
ctggattttgtccttgaactaaaaaaaaaatcaaaacaggctcaagacattctgaggaaa
tatagagaagggattgaagacgaggtcatgaaactcctgagtgcctgtaaaggctccaca
ctgtctgatgatcagctgacacatgagtttgaaaagatgtggactgaagccactaaaaat
gtgtctgacctgaaagaacaagacattgcagcaaatattctcaaccagttgagaaaaaat
ttctcaaaccggaatgtaaatgagaacttccaaaagattaaagatctgaaggagtttggg
aaggatccatttaaaaccagctgtgaccatctgaactcctggttgaataaggctgagtct
gtggttcggggattaggagatctgcaaaactttgctaacggtgtcattgagtcttgcaca
cggtttgtgctcgataaaggaaagacaaacacagattaccatgactcttttacaagagat
cttcttgaaaaaatggatgaatcccttcaacaaagttacaagtatcacaaaaccaatgca
aagtttgagtttgacctgaaacttcacatttgtggcattgcctcaagggaattcctcaaa
atgcaccaaaaatacttgtctgataaagatcctcaaactcagctacagaaacacaagagt
cagtacttgacagattttcttgatttgtacaaacaaagagatgattgtcaacgcaaagca
aaggaatttgtccaggtctgtatcaaacctgctgtggaagagttcatcaatagatatttg
ggaatagacattgtagatgaaatagtgacaggttctcattcagcagagtacagctcccgc
tcctttttccagtacaacattcatgaagagttgctgcaaaaggatgactttgacagttgc
gtcaagtacatttgtaattatgaaatatatgttaaggattggatatttcagcaaatccag
aaacaaatgtcggaggacaaaactttgtgcaaactgaagaacaagatccttcaagtcata
gttgataaaatcacagcagcattagagcaggcctcaaaaggaccagatggtgttcaactg
ccagacaacattaaaagcatcacagagctcatcagcaacatgcagaaatatttgattaaa
gacatctcaatctcagtggaggctgaaaaaacatccctgtttcaaatccaaagcacatgt
catccatttatcaacagcctcaaaatgtcaatagaagacttgaacaaacagcttcaggag
gaattcttaaagtctgaagacatcactgagactctgaacaagcttccaatcaaaccacag
gatgagcttttcaagagagtttttggttgtggaaagcaatgtccattttgtaaagttccc
tgtgaggctggaggaaaaggacacgataagcatcatgcagctttacatcgaccacaaggt
cttggtggatgcaggaattcaaacactaagaagctgcttccagaactgtgtacaactaat
gtgcagagtgaacgtacattcagaaactcagatactaaatgggagcctcatccttacaaa
gagtatcacacttactatccagactggaacattcctccagatcccagcatagaggcatct
gactactggaagtatgtactggtacgatacaatgacagatttgctgaagaatacaaggct
gagccagctgatgttccagaggcctggaggagaatcacaaaggaacaagcactgaagggg
ttaaaagatgccttcaacataaagtga
DBGET
integrated database retrieval system