KEGG   Scomber japonicus (chub mackerel): 128358656
Entry
128358656         CDS       T09718                                 
Name
(RefSeq) interferon-induced very large GTPase 1-like isoform X1
Organism
sjo  Scomber japonicus (chub mackerel)
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr RHD3_GTPase ABC1 Dynamin_N Kinase-like MMR_HSR1
Other DBs
NCBI-GeneID: 128358656
NCBI-ProteinID: XP_053174978
LinkDB
Position
1:complement(40947428..41073233)
AA seq 1788 aa
MSHPFIVQYKESFEDTSCLYIVMDYCEGGDLSKKIKSQKGKLFSEQQILDWFVQICLALK
HIHDRKILHRDIKPENIFLTKDGTVQLGDFGVARVLNRTGELATTHIGTPLYISPEICEN
KPYNNKSDIWALGCVLNEMCTLKPAFKAGNMGELCLKIIRGSYSPVSDHYSQELSSLLAL
LLDCDPEKRPSVSSILNRPFLCCRIQKFLTPQIIAQEFGPEEGVILGSAALFNFLSKLGL
QKFYPNKLTLHSLLEINKNNIYNDTVESLEKIPWCFLRKLFHINAECRNCTQVSTNDDDE
NSDLFDFDQLTTDDTVDNKVNPLDLIVALFHCADSFLQQEMALKMSMCQFSVPLLLPHGN
NSQSTLMLWALRDIVKEWRPQDLSESRGFVEDNIVQANIPFFTFVRLKNCSLSKSQVLNH
VLSCGQQNHKLFIHRDMEGGSLKRRIANGLVEVCWFLPCGREDLDIFPEPVAFANLRGDI
CESLEQFNFLVQESTSTFVFLDKVEEKEHKILTSLQDVKSKLFLVVNRKDSSKEDMMSVR
KTLKELQLPNSRVKVKDSRVNVAELLNKLCDAIKTSLSDVSATFNIVNMVGKAAELGLDV
DETTSGEQKKAVEEIMVDIERQSIPDYKKQQLPLQGENWKTLSQLEKDECRLKTGESGLE
EYKCQIQEGKDKIRKEQSKQNLSKGMKSFIKTISTSDKEKRDFFLKWMKLKLNAHSRSKL
SDLRNKLKEQCEKTDIKDIKLMERLDKDLLESFLGVEHYMREMGLIYEFSIDDSRNTADE
ISRLPGLAAEMLLDGFPLELLDGDASNIPERWVTDVLMELHKKVGEQSRLLVLTVLGVQS
TGKSTLLNTMFGVQFPVSSGRCTRGAYVLFLRVGEDMKRELNFDFIVLIDTEGLKSPDLA
ELEGSYEHDNQMATFVIGLSDVTIINIAMENLTEMKDILQIVAHAFLRMKDIGKKPVCHF
VHQNVSGVSAHAKNLTDRKHLLDQLNKMTQIAAEMEKNPSIKVFTDVLDYDMDKNNWNIP
GLWHGTPPMASVSTGYSAVLAELKKHLLETVKRNQSNQVSKIPEFLEWMRSLWKAVKYEN
FIFSFRNTLVARAYVNLCKEFSQWEWQFTKEILSWQQKAELEILNSDIEFDIQDWSTLVE
PKKSEVSKEIATEEGKMKEKLTNYYKRKDQNVNLIEKYKTDFFKSISSLTEEIRHSANNK
LDFVLELKKKSKQAQDILRKYREGIEDEVMKLLSACKGSTLSDDQLTHEFEKMWTEATKN
VSDLKEQDIAANILNQLRKNFSNRNVNENFQKIKDLKEFGKDPFKTSCDHLNSWLNKAES
VVRGLGDLQNFANGVIESCTRFVLDKGKTNTDYHDSFTRDLLEKMDESLQQSYKYHKTNA
KFEFDLKLHICGIASREFLKMHQKYLSDKDPQTQLQKHKSQYLTDFLDLYKQRDDCQRKA
KEFVQVCIKPAVEEFINRYLGIDIVDEIVTGSHSAEYSSRSFFQYNIHEELLQKDDFDSC
VKYICNYEIYVKDWIFQQIQKQMSEDKTLCKLKNKILQVIVDKITAALEQASKGPDGVQL
PDNIKSITELISNMQKYLIKDISISVEAEKTSLFQIQSTCHPFINSLKMSIEDLNKQLQE
EFLKSEDITETLNKLPIKPQDELFKRVFGCGKQCPFCKVPCEAGGKGHDKHHAALHRPQG
LGGCRNSNTKKLLPELCTTNVQSERTFRNSDTKWEPHPYKEYHTYYPDWNIPPDPSIEAS
DYWKYVLVRYNDRFAEEYKAEPADVPEAWRRITKEQALKGLKDAFNIK
NT seq 5367 nt   +upstreamnt  +downstreamnt
atgagtcatcccttcattgtccagtataaggaatcttttgaagacacgagctgtctgtat
attgtgatggactactgtgaaggaggagacctctccaagaagatcaagtctcagaaagga
aaacttttctcagaacagcaaatcttggactggtttgtgcagatttgtttggcactaaaa
cacatccatgatagaaaaatcctccacagagacatcaaaccagagaacatatttttgact
aaagatgggactgtacagcttggagactttggagttgcaagagtgctgaacaggactgga
gaactggcaacaacacacataggaacaccactttacatatcaccagagatctgtgagaac
aaaccatacaacaacaaaagtgatatttgggccctaggttgtgtcctgaatgaaatgtgc
actctaaagcctgcatttaaggctggcaatatgggggaactatgtctgaagatcatccgt
ggctcatactctcctgtgtctgatcactactcccaagaactgagctctctcttggctctg
ctgttggattgtgaccctgaaaagagaccctcagtcagcagcatactgaacagacctttc
ctctgctgcaggatacagaagttcctcacaccacagatcattgctcaggaatttggccct
gaagagggagtgatactggggtcagcagcccttttcaactttctctccaaacttggactg
cagaaattttatcccaacaagctcactcttcactctcttttggaaatcaacaaaaacaat
atttataatgatactgttgaatcattggagaaaataccatggtgctttctcaggaaactc
tttcatatcaacgcagaatgcagaaactgtacacaagtatcaaccaatgatgatgatgaa
aacagtgatctgtttgactttgaccagctcactacagatgacactgtagacaacaaggtt
aaccctctggacctcatagttgcactctttcattgtgctgacagcttcttgcaacaggaa
atggccctcaagatgtcaatgtgtcagttttctgtcccactgctgttgcctcatggcaat
aacagtcagtctactctgatgctgtgggctctgagagacatcgtcaaagagtggcgtcca
caggatttgtctgaatcaagaggatttgttgaagacaacattgttcaagcaaatatacca
ttctttacctttgtcaggctgaaaaactgtagtctctccaagtcacaggttttgaatcat
gttctcagttgtggccaacagaatcacaagttgttcatacacagagatatggaaggagga
agtcttaaaagaagaatagccaatggtttggtggaggtttgctggttccttccctgtggc
agagaagatcttgacatatttccagagccagttgcctttgccaatttgagaggagacatt
tgtgagtcactggaacaattcaattttcttgttcaagagtcaacttctacctttgtgttc
ctggacaaagtagaagaaaaagagcacaagattctgacttctcttcaagatgtgaaatcc
aaactcttcttggttgttaatcggaaggacagctctaaagaggacatgatgtctgtgagg
aaaacactaaaagagttacagctaccaaatagcagagtgaaagttaaagactcaagggta
aatgtagcagagttgttaaataaactttgtgatgctatcaagacctcactgtcagatgta
tcagccacattcaacattgttaatatggttggaaaagctgctgagcttggtctggatgtg
gatgaaaccacaagtggtgaacaaaagaaagcagttgaggagatcatggttgatattgag
aggcagagtataccagactacaagaaacaacaacttcctttgcagggagaaaactggaaa
acattatcacagttagagaaagatgagtgtagattgaaaactggtgagtcaggccttgaa
gaatacaaatgccagatacaggaaggaaaagataaaattaggaaggagcaaagcaaacaa
aatctttccaaaggaatgaagagttttattaaaaccatttccacaagtgacaaagagaaa
agagatttttttctcaagtggatgaaactcaaacttaatgcacattcacggagcaaactg
tctgatctgcgcaacaaattaaaagagcaatgtgagaaaacagacatcaaagacatcaaa
ctcatggaaaggttagataaagatttgctggaaagcttcctaggagtagagcattacatg
agagagatgggactcatctatgagttctcaattgatgactcaagaaacactgctgatgaa
atatctcgtctccctggtttggctgctgaaatgctgttggatggatttcctttagagctc
ttggatggagatgcttccaacatcccagagagatgggtgacagatgtgctgatggagctt
cacaagaaggttggagaacagagcagactgttagtactgactgtgctgggtgttcaaagt
acagggaagtcaacactcctcaacaccatgtttggtgtgcagtttcctgtcagcagcggc
agatgcacaagaggagcttatgtgctcttcctcagagttggagaagatatgaaacgtgag
ttgaactttgattttatagttctcattgacacagagggtctaaagtctcctgatctggca
gaactagaaggcagttatgagcatgacaaccagatggcaacatttgtgattggtttaagt
gacgtcaccattattaacattgcaatggagaatttaacagaaatgaaagacattctgcaa
attgtagctcatgctttcctgagaatgaaggacattggtaaaaagccagtttgtcatttt
gtgcatcaaaatgtttctggagtttcagctcatgcaaagaacctcacagacagaaagcat
ctcttggatcagctcaataaaatgacacaaattgctgctgaaatggaaaagaatccttct
attaaagtatttacagatgtgctggactatgacatggacaaaaacaactggaacatccca
ggactctggcatggaacccctccgatggcatcagtgagcacaggttacagtgcagtttta
gcagaattaaagaaacatcttttggagacagtaaaaagaaaccaaagcaatcaagtctca
aagatcccagagtttctagaatggatgagaagtctctggaaagctgtgaaatatgagaac
ttcatctttagtttcagaaacactcttgtagcccgtgcctatgttaatctgtgcaaagag
ttcagtcaatgggaatggcagttcacaaaagaaatcctctcctggcaacaaaaagcagag
ttggaaatcttgaattctgacattgaatttgatattcaagattggagcacactggttgaa
ccaaaaaaatcagaggtgtcaaaagaaatagcaactgaagaaggaaaaatgaaggagaaa
ctcaccaactactacaaaaggaaagaccagaatgtaaatctgatagaaaaatacaaaact
gactttttcaaaagtatcagtagtcttaccgaggaaatcagacattcagcgaacaataaa
ctggattttgtccttgaactaaaaaaaaaatcaaaacaggctcaagacattctgaggaaa
tatagagaagggattgaagacgaggtcatgaaactcctgagtgcctgtaaaggctccaca
ctgtctgatgatcagctgacacatgagtttgaaaagatgtggactgaagccactaaaaat
gtgtctgacctgaaagaacaagacattgcagcaaatattctcaaccagttgagaaaaaat
ttctcaaaccggaatgtaaatgagaacttccaaaagattaaagatctgaaggagtttggg
aaggatccatttaaaaccagctgtgaccatctgaactcctggttgaataaggctgagtct
gtggttcggggattaggagatctgcaaaactttgctaacggtgtcattgagtcttgcaca
cggtttgtgctcgataaaggaaagacaaacacagattaccatgactcttttacaagagat
cttcttgaaaaaatggatgaatcccttcaacaaagttacaagtatcacaaaaccaatgca
aagtttgagtttgacctgaaacttcacatttgtggcattgcctcaagggaattcctcaaa
atgcaccaaaaatacttgtctgataaagatcctcaaactcagctacagaaacacaagagt
cagtacttgacagattttcttgatttgtacaaacaaagagatgattgtcaacgcaaagca
aaggaatttgtccaggtctgtatcaaacctgctgtggaagagttcatcaatagatatttg
ggaatagacattgtagatgaaatagtgacaggttctcattcagcagagtacagctcccgc
tcctttttccagtacaacattcatgaagagttgctgcaaaaggatgactttgacagttgc
gtcaagtacatttgtaattatgaaatatatgttaaggattggatatttcagcaaatccag
aaacaaatgtcggaggacaaaactttgtgcaaactgaagaacaagatccttcaagtcata
gttgataaaatcacagcagcattagagcaggcctcaaaaggaccagatggtgttcaactg
ccagacaacattaaaagcatcacagagctcatcagcaacatgcagaaatatttgattaaa
gacatctcaatctcagtggaggctgaaaaaacatccctgtttcaaatccaaagcacatgt
catccatttatcaacagcctcaaaatgtcaatagaagacttgaacaaacagcttcaggag
gaattcttaaagtctgaagacatcactgagactctgaacaagcttccaatcaaaccacag
gatgagcttttcaagagagtttttggttgtggaaagcaatgtccattttgtaaagttccc
tgtgaggctggaggaaaaggacacgataagcatcatgcagctttacatcgaccacaaggt
cttggtggatgcaggaattcaaacactaagaagctgcttccagaactgtgtacaactaat
gtgcagagtgaacgtacattcagaaactcagatactaaatgggagcctcatccttacaaa
gagtatcacacttactatccagactggaacattcctccagatcccagcatagaggcatct
gactactggaagtatgtactggtacgatacaatgacagatttgctgaagaatacaaggct
gagccagctgatgttccagaggcctggaggagaatcacaaaggaacaagcactgaagggg
ttaaaagatgccttcaacataaagtga

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