Scomber japonicus (chub mackerel): 128358811
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Entry
128358811 CDS
T09718
Symbol
zc3h18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18
KO
K13092
nuclear protein NHN1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128358811 (zc3h18)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
General mRNP proteins
128358811 (zc3h18)
BRITE hierarchy
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
128358811
NCBI-ProteinID:
XP_053175179
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All DBs
Position
5:26986340..27030798
Genome browser
AA seq
1167 aa
AA seq
DB search
MDTPESPTQSPQSPEEEKGLSDSELLDSADEEDERVNSDSEIFNEEENGGLGEEYEEAVD
SRGRGLGLEEEEGEEEDEVVPDFVSDPEDEEPVGERGGMGQEDETILLMEGDDDGPQGGQ
LDGDEEDEEEEEEGEDKVIDTPQSPDSEQGRSFIAEEDGEDRDEEYGDYRKVISAEPGAK
TVDVDDEEEEERCKAEEEEEDERRRAEERRRAAVAREMKEDSASVSRELDEHELDYDEEV
PEEPSIPAHEDEEDEEDAKAQGDEEEESEDKSSKRKEKKPILPPSPKDGESRRTDDSKGP
ERVRRDSFRDKKKEDDDGEIDEGEIDDDDLEEGEVKDPSDRKIRPRPICRFFIKGNCTWG
MNCRFIHPGVNDKGNYSLISKPDLFSPNGAPPGGPHPLIPNNPWAGPAVEELPPPPPPVE
PPVESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFNVTIGEDEREFDKENDFFRERSYR
IIRDEMEFRDPIYGDPYADPYYDYEMEALWRGGQYENFRVQYTEAPLPYHYSERERERDP
RERNRDRERERDHRERERRQREREREREREREKERMRRKEEWERDRMKRDEKERPRMRPP
RDAREKKDEDKLKPRSPMSMPPNRPMEPPSKKEVVPVMRRPDEWKDPWRRSKSPRRRPGL
GSPPRGRRRHRPSGSSVSLSNSSRSSSRSSSYTGSGSSRSRSRSSSFSSYSSHSSQRSSF
SGSRSRSRSFSTSPSPSPAAPRNAKNKPDLPPVLTKGMPLKPGAMPPPRREKPPMKKAPS
PPPPGGPQGRPSKPLPEGGKPPTNPREAVGAGGGGGPGGAGRPLPPREPGKPPNPREGRR
KERQQHPPRRRTVSGSVSGSGSSYTGSSSRSRSSSNSLSRSRSGSRKSRKSRSLSVSSVS
SVSSASSSSSSVRSADSDDMYADLASPVSSASSRSPTPNHPRKERGGPVRDRPPHGRDKN
RERPSKKDEPFREDRRKMDPSGPLPRGGNSMPRSGPGSRGGHSLHPPPGAMGPPGSYGGS
GSHKDIKLTLLNKQGDKGNRKRYLPSDKERPGSPLSKRMAMSPDRGRDKRIPGRPPLSPR
MDRPRGQGPRPMPPQGDRKRPLSPPPKSSGKGPAAPSGKPPAPGSTSAVGSGSNKPSNTL
SRREELLKQLKAVEDAIARKRAKIPTK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggatacccctgaaagccctacccagtcccctcagtctcctgaggaggagaagggcctt
tctgacagtgagctactggattctgctgatgaagaggatgaaagggtcaactcagacagt
gagatatttaatgaagaggagaatggggggctgggagaggagtatgaagaggcagtggac
agtcgaggaagaggtttgggattagaggaggaagagggggaagaagaggatgaggtggtt
cctgactttgtgtctgatccagaggatgaggagccggtaggagaaagaggagggatggga
caggaggatgagaccattctgctgatggagggagatgatgacggtccacaggggggtcag
ttggatggagacgaggaggacgaggaggaggaggaggaaggagaggataaagtcattgac
accccgcagtctccagactcagagcagggcagaagcttcattgctgaagaggatggagag
gatagggacgaggaatatggtgactacagaaaggtcatctcagcagagcctggcgccaag
acagttgatgtggatgacgaggaggaggaggagagatgcaaggctgaggaggaagaggag
gacgaaaggaggcgagctgaggagaggagaagagccgcggtggcaagggagatgaaggaa
gactctgcatccgtttctcgggagctggacgagcatgagctggattatgacgaggaggtg
cctgaggagcccagcatccccgcacatgaggacgaggaagatgaggaagatgcaaaagct
cagggagacgaagaagaggagagtgaggacaagtctagtaagaggaaagagaagaaacca
atcctcccgccatctcccaaagacggtgaatccaggaggacagacgactccaaaggacct
gagagggtgcgcagagattccttcagagacaagaaaaaggaagatgatgatggagagatt
gatgaaggagagattgatgatgatgacctggaggagggggaggtcaaagatccctcagac
agaaagatcagacctcgtcctatctgcagattcttcatcaaaggaaattgtacttggggt
atgaactgtaggtttatccaccctggagtcaatgacaaaggtaactattccctcatcagt
aagccagacctcttctcacctaatggagcaccacctggaggaccacacccactcataccc
aacaacccctgggctggtcctgcagtggaggagctcccaccaccgcctcctccagtggag
cctcctgtggagagcgcctgggagagaggcctgaggcatgccaaagaggtgctgaagaaa
gctaccatccgtaaagagcaggagccggacttcgaggaaaagcgcttcaacgtgaccatc
ggagaggacgagagagaatttgacaaggagaacgatttcttcagagaacgcagctaccga
atcatcagagatgaaatggaattcagagatcctatctatggtgatccatatgctgaccca
tattatgactatgaaatggaggccctgtggcgcggtggccagtatgaaaacttcagagtg
cagtacacagaagctcctcttccttaccactacagtgaacgcgaacgtgaacgcgacccc
cgagagcgcaaccgggacagagagagggagagggaccatcgcgagagggagcggaggcag
agagaaagggagcgggagagagagcgcgagcgcgagaaggagaggatgaggcggaaagaa
gagtgggagagggaccggatgaagcgggacgagaaggagaggcctaggatgcgtcctcct
cgagacgccagggaaaagaaagatgaggacaaactcaaaccacgctcgcccatgagcatg
ccacccaacaggcccatggagcctccctccaagaaagaggttgttccagtcatgagacgg
cccgatgaatggaaagacccgtggcgccggtccaaatcccccaggagacggcccgggctg
ggctcaccaccacgaggccgccgccgtcatcgaccctctggttcctctgtctctctgtcc
aactcctccaggtcttcgtctcgctcttcatcctacacgggctccggctcatctcggtct
cgcagccgctcatcttcattcagctcctactccagccactcctcccagcgcagctccttc
agcggcagccgctccaggtctcgatcgttctccacgtctccctcaccgagtccagcagca
cccaggaatgctaagaacaaaccagaccttcctcctgtgctcactaaaggcatgccgctg
aagccgggtgccatgccccctcctcgcagggaaaagcctcccatgaagaaagctcccagc
cctcctccgcctggcggaccacagggaagaccttccaaaccccttccagagggagggaag
cctcccaccaatccccgggaggctgtaggtgcaggtggtgggggaggccctggcggagca
gggagacccctgccaccacgggaacctggaaagccccccaatccaagagaaggcagacgg
aaagaacggcagcagcatcccccccggaggcggactgtgagtgggagtgttagtggaagc
ggtagcagttatactggttctagctccagatccagatcctcatccaactctctgtcacgc
tcacgctctggatccagaaaatccaggaaatccagatctctgagtgtcagcagtgtgtct
tcagtgtcatcagcatcatccagcagcagctctgtgcgtagcgcagactcggatgacatg
tacgccgacctcgccagtccagtgtcctcggcgagctcccgatcacccacgccgaatcac
ccacgcaaggagcgaggggggccagtgcgggaccgtcctccgcacggcagagataagaac
agggagagaccatcaaagaaagatgaacccttcagggaggatcgcaggaagatggaccca
tctggtcctctacccagaggaggcaactccatgcccagatcagggcctgggagcaggggt
ggccactctctacatcctccacctggcgccatgggtcccccaggaagctatggaggttca
ggttctcataaagacatcaaacttaccctcctcaacaagcagggagataagggcaacagg
aagaggtacttgccttcagacaaagagaggccaggttccccgctcagcaaaagaatggcc
atgtctccagacagaggccgtgataagaggatacctggccgacccccgctctcccctcga
atggatcggcccagaggccaagggccccgacccatgcctccccagggagacagaaaacgc
cccctgtcaccaccccccaagtcatctgggaaaggcccagcagcgccatcgggcaaaccc
cccgccccaggctccacttcggctgtcggttctggctccaacaaacccagcaacacactg
tcccgccgcgaggagctgctgaaacagctgaaggccgtggaagatgcgatcgcccggaag
agagcaaagatccccaccaaataa
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integrated database retrieval system
