KEGG   Scomber japonicus (chub mackerel): 128368625
Entry
128368625         CDS       T09718                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04510  Focal adhesion
sjo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128368625 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128368625 (lamc1)
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Death DUF6061 Sec63 Alanine_zipper
Other DBs
NCBI-GeneID: 128368625
NCBI-ProteinID: XP_053185452
LinkDB
Position
12:33790652..33857780
AA seq 1594 aa
MRSLIRALVVWSWAAVCVLAAMDECVDEQNRAQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTREGGPWVPYQYYSGSCEKTYQKASRGFIR
TGENEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSGGRLVCNCKHNTEGDD
CNVCKPFFNDRPWMRATSENPNECLACNCNGKSSECYFDAELYRATGHGGHCRNCVDNTD
GPNCERCLDNYYRDPSGNRCLQCSCNSVGSESPQCDNRGVCVCKPGVTGEKCDRCQPGYH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGFFNLDPNNPQGCTPC
FCFQHSSVCGSAEGFSVHTISSSFHRDDEQWKAQQRDGASVSVQWSSSGQEISLISEDYF
PMYFIAPEKFLGNQMLSYGQNLSLNFRVDRRDTRLSAEDLVLEGAGLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHSDFQKLLHNLTSIKIRGTYSERSAGYLDDVSLVT
ARRAPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRAQPELGAFSPCEPCNCNGHSEACTP
DTGACDCQHNTAGLSCERCKDGYYGDATQGTSGDCQPCPCPAGATCAVVPKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQNGPVRVCRACKCSDNIDLNAVGNCNRETGECLKCIYN
TDGFFCDRCKEGFYGNALATNLADKCKPCSCSASGTVGRQTSCSQVTGQCQCLPNVAERD
CSACEPGFFNLLSGDGCKRCNCNPIGSTNGQCDIITGQCECQPGVTGLHCERCEANFFGF
GSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
GLVRDKVNQQRQKLHDLQTLIDNLGSGQDTVSDKAFEDRLKEAERAIMELLDEAQTSKDV
DKGLMDRLNTINNTLTTQWNRLQNIRNTVDDTGTQADRARNRVRDAEDLIDRARQELDKA
KDAIGKVDIKPPSGSGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLDGEGKTSQEIDELNKKYNEAKELAKNLEKQANKVQAEAEDAGKKALKIFANLTSLP
PFDTKALEDEANKIKKEASDLDKLIDKTEKEYNDLRDDLKGKELEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAAKKGQSTFREAETILEDLRDFDKRVNDNKTAAEEALKKIPIIN
ATIIAANGKTREAEAALGNAANDAREAKNKAEEAERIASNVQKGSAKTKEDAEKAFQDTD
KLDKEVDNMMDQLSAAEQELARKKAEADQDMMMAGMASDNAKEAEDNARKAKGAVKNVLG
IITNLLDQLGNIDKVDLSKLNQIDESLKRAKGKMTDSMLDKKLAELNDVAKTQGDMINDY
DRQIQEIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgcgaagtttgatccgagctctggtggtttggagctgggcggcggtgtgcgtcctcgcg
gccatggatgagtgcgtggacgagcagaaccgagcgcagcgctgcatgccggagtttgtg
aacgcggcttttaacgtgaccgtggtggcgaccaacacctgcgggtctccaccggaggaa
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcccgg
gacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcgggcatccagtaccccaactccatcaacctc
accctgcacctcggaaagtcctttgacatcacgtatgtccgcctcaagttccacaccagc
cgcccggagagcttcgccatctacaagcggaccagagaggggggcccctgggtgccctac
cagtactacagcggctcctgtgagaagacgtaccagaaggcgagccgcggcttcatccgc
accggagagaacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accggcggcaacgtggccttctccacgctggagggccgacccagcgcctacaactttgac
cacagccccgtcctgcaggactgggtgacggccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagatgaagttttcaacgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaaatgtaacggccatgccagcgagtgt
gtgaagaacagcggaggacggctggtgtgtaactgcaaacacaacaccgaaggcgacgac
tgcaacgtctgcaaaccgttcttcaacgaccggccgtggatgagagcgacgtccgaaaac
cccaacgagtgtctggcctgtaactgcaacgggaagagctctgagtgttacttcgatgct
gagctgtaccgggccaccggtcacggaggtcactgcagaaactgcgtcgataacactgac
ggccccaactgcgagcgctgcctcgacaactactacagagacccaagcggcaaccgctgt
ctgcagtgcagctgtaacagcgtcggctcggagtctccccagtgcgacaacagaggagtg
tgtgtgtgtaaacctggagtgaccggagagaagtgtgaccgctgccagccgggataccac
agcctgacggaggccggctgcaggccctgctcttgctcgccctctggcagcacgcaggag
tgtgacgtcaacaccggacagtgtcgctgcaaagacaacgtggagggtttcagctgcgac
aggtgtaaactgggcttctttaacctggatcccaacaaccctcagggctgcacaccctgc
ttctgcttccagcactcgtctgtgtgcggcagcgccgaaggcttcagcgttcacaccatc
agctcctccttccacagagatgacgagcagtggaaagctcagcagcgtgatggagccagt
gtctctgtgcagtggtcttccagcggacaggaaatctccctcatctcagaagactacttc
cccatgtacttcatcgctccagagaagtttttggggaaccagatgctgagttacggacag
aacctgagtctaaatttccgggtggaccggcgggacacgcggctgtcggcagaggatctg
gttctggagggagccggtctgagggtggccgtccccctcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgactacccctgg
aggccgaccatcagccactctgacttccagaaactgctccacaatctgacctccatcaag
atcagaggcacctacagcgagaggagtgccggttaccttgacgacgtctccttggtgacg
gcgaggcgggctccaggtgtcccggcccgctgggtggagcagtgcacctgtcctcagggt
taccaggggcaacactgtgagcagtgcactctgggataccgccgtgcgcaaccagagctc
ggagccttcagcccctgtgagccctgcaactgcaacggccacagcgaggcctgcacgcct
gatactggagcgtgcgactgtcagcacaacaccgccggtctgagctgtgagcgctgtaag
gacggttactacggcgacgccacccaggggacgtccggtgactgtcagccatgtccgtgt
ccggccggagccacctgcgccgtcgtccccaaaaccagagaggtggtctgcaccaactgt
cccgccggcaccacaggaaagcgctgcgagctctgtgacgacggtttcttcggcgacccg
ctgggtcagaacggtccggtccgagtctgccgcgcctgcaagtgcagcgacaacatcgac
ctcaacgccgtcggcaactgcaaccgcgagaccggcgagtgtctgaagtgcatctacaac
accgacggcttcttctgcgaccgctgcaaggagggtttctatggcaacgccctggccacc
aaccttgccgacaagtgcaaaccatgttcctgctctgcgtctggcaccgtgggccgacag
accagctgctctcaggtcaccggacagtgtcagtgtcttcccaacgtcgccgagcgtgac
tgcagcgcctgcgagcccggcttcttcaacctgctcagcggcgacggctgcaaacggtgt
aactgtaatcctattggctccaccaacggtcagtgtgacatcattacaggacagtgcgag
tgccagccgggcgtcaccggtctgcactgcgagcgctgcgaggccaacttcttcggcttc
ggctcgtccggctgcaaaccctgcgactgcgaccccgagggctcccagtcgggtcagtgc
aaggaggacggtcgctgtgagtgccggcccggcttcgtgggcgctcggtgcgacatgtgt
gaggagaactacttctataaccgctcagcaccgggctgccagcagtgtccttcctgttac
ggcttggtcagagataaggtgaaccagcagaggcagaagcttcatgacctgcagactctg
atcgataacctcggctcaggtcaggacaccgtcagcgacaaagccttcgaggatcgtctg
aaggaggccgagcgagccatcatggagctcttggacgaagctcagaccagcaaagatgta
gacaaaggcctcatggaccgcctgaacaccatcaacaacactctgaccacccagtggaac
cgactgcagaacatccgcaacacggtggatgacaccggcactcaggccgaccgcgcccgc
aaccgggtccgcgacgctgaagacctgattgaccgcgcccggcaggagctggacaaggcc
aaggacgccatcggcaaagtggacattaaaccacccagcggatccggagatcccaacaac
atgacgctgttggctgaggaggctcgaaacctcgctgacaaacacaagatggatgctgac
cagatcgaaaagatcgccaaagacgccaacgacacgtcgaccaaagcgtacaacctgctg
ctgaagactctggacggagagggcaagacgagtcaggagatcgacgagctcaacaagaag
tacaacgaggcgaaggagctggcgaagaatctggagaaacaggccaacaaggttcaggcc
gaagctgaagacgctggaaaaaaagctttgaagatcttcgccaacctgaccagcctgccg
cccttcgacaccaaggcgctggaggatgaagccaacaagattaagaaggaggcgtccgat
ctcgacaagctcatcgataaaacggagaaagagtacaacgacctcagagatgacctgaag
ggcaaagagctggaagtccgcaagctgttggagaaaggcaaaagtgagcagcagactgca
gatcagctgttggctcgagcagatgctgccaaagctctggctgaggaggcggccaagaag
ggacagtccaccttcagagaggctgagaccatcctggaagacctcagagacttcgacaaa
agggtcaacgataacaagactgctgcagaggaggccttgaagaagatccccatcatcaac
gccaccatcattgccgccaatgggaagaccagagaggcagaagcagcgcttggcaacgct
gccaacgatgcccgagaggccaagaacaaggcggaggaggcggagaggattgctagcaat
gtgcagaagggctcagccaagaccaaggaggacgcagagaaggccttccaggatactgac
aagctggacaaagaggtcgacaacatgatggaccagctgagcgccgcagagcaggagctg
gccaggaagaaggccgaagccgaccaggacatgatgatggcaggaatggcgtcagataac
gctaaagaggcagaggacaatgcccgcaaggccaagggcgccgtgaagaacgtcctgggc
atcatcaccaacctgctggatcagctgggaaacattgacaaggtggacctgagcaaactc
aaccagatcgacgagtcgctgaagagggccaagggcaagatgaccgacagcatgctggac
aagaagctggcagagctgaatgacgttgcaaaaactcaaggcgacatgatcaacgactac
gaccggcagatccaagagatccgtgccgacatcgccaacctcaacgacatcaagaacacg
ttacccgagggctgcttcaacacgccgtctctggagaggccttaa

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