Scomber japonicus (chub mackerel): 128368625
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Entry
128368625 CDS
T09718
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128368625 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128368625 (lamc1)
BRITE hierarchy
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Death
DUF6061
Sec63
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
128368625
NCBI-ProteinID:
XP_053185452
LinkDB
All DBs
Position
12:33790652..33857780
Genome browser
AA seq
1594 aa
AA seq
DB search
MRSLIRALVVWSWAAVCVLAAMDECVDEQNRAQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTREGGPWVPYQYYSGSCEKTYQKASRGFIR
TGENEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSGGRLVCNCKHNTEGDD
CNVCKPFFNDRPWMRATSENPNECLACNCNGKSSECYFDAELYRATGHGGHCRNCVDNTD
GPNCERCLDNYYRDPSGNRCLQCSCNSVGSESPQCDNRGVCVCKPGVTGEKCDRCQPGYH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGFFNLDPNNPQGCTPC
FCFQHSSVCGSAEGFSVHTISSSFHRDDEQWKAQQRDGASVSVQWSSSGQEISLISEDYF
PMYFIAPEKFLGNQMLSYGQNLSLNFRVDRRDTRLSAEDLVLEGAGLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHSDFQKLLHNLTSIKIRGTYSERSAGYLDDVSLVT
ARRAPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRAQPELGAFSPCEPCNCNGHSEACTP
DTGACDCQHNTAGLSCERCKDGYYGDATQGTSGDCQPCPCPAGATCAVVPKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQNGPVRVCRACKCSDNIDLNAVGNCNRETGECLKCIYN
TDGFFCDRCKEGFYGNALATNLADKCKPCSCSASGTVGRQTSCSQVTGQCQCLPNVAERD
CSACEPGFFNLLSGDGCKRCNCNPIGSTNGQCDIITGQCECQPGVTGLHCERCEANFFGF
GSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
GLVRDKVNQQRQKLHDLQTLIDNLGSGQDTVSDKAFEDRLKEAERAIMELLDEAQTSKDV
DKGLMDRLNTINNTLTTQWNRLQNIRNTVDDTGTQADRARNRVRDAEDLIDRARQELDKA
KDAIGKVDIKPPSGSGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLDGEGKTSQEIDELNKKYNEAKELAKNLEKQANKVQAEAEDAGKKALKIFANLTSLP
PFDTKALEDEANKIKKEASDLDKLIDKTEKEYNDLRDDLKGKELEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAAKKGQSTFREAETILEDLRDFDKRVNDNKTAAEEALKKIPIIN
ATIIAANGKTREAEAALGNAANDAREAKNKAEEAERIASNVQKGSAKTKEDAEKAFQDTD
KLDKEVDNMMDQLSAAEQELARKKAEADQDMMMAGMASDNAKEAEDNARKAKGAVKNVLG
IITNLLDQLGNIDKVDLSKLNQIDESLKRAKGKMTDSMLDKKLAELNDVAKTQGDMINDY
DRQIQEIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtttgatccgagctctggtggtttggagctgggcggcggtgtgcgtcctcgcg
gccatggatgagtgcgtggacgagcagaaccgagcgcagcgctgcatgccggagtttgtg
aacgcggcttttaacgtgaccgtggtggcgaccaacacctgcgggtctccaccggaggaa
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcccgg
gacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcgggcatccagtaccccaactccatcaacctc
accctgcacctcggaaagtcctttgacatcacgtatgtccgcctcaagttccacaccagc
cgcccggagagcttcgccatctacaagcggaccagagaggggggcccctgggtgccctac
cagtactacagcggctcctgtgagaagacgtaccagaaggcgagccgcggcttcatccgc
accggagagaacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accggcggcaacgtggccttctccacgctggagggccgacccagcgcctacaactttgac
cacagccccgtcctgcaggactgggtgacggccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagatgaagttttcaacgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaaatgtaacggccatgccagcgagtgt
gtgaagaacagcggaggacggctggtgtgtaactgcaaacacaacaccgaaggcgacgac
tgcaacgtctgcaaaccgttcttcaacgaccggccgtggatgagagcgacgtccgaaaac
cccaacgagtgtctggcctgtaactgcaacgggaagagctctgagtgttacttcgatgct
gagctgtaccgggccaccggtcacggaggtcactgcagaaactgcgtcgataacactgac
ggccccaactgcgagcgctgcctcgacaactactacagagacccaagcggcaaccgctgt
ctgcagtgcagctgtaacagcgtcggctcggagtctccccagtgcgacaacagaggagtg
tgtgtgtgtaaacctggagtgaccggagagaagtgtgaccgctgccagccgggataccac
agcctgacggaggccggctgcaggccctgctcttgctcgccctctggcagcacgcaggag
tgtgacgtcaacaccggacagtgtcgctgcaaagacaacgtggagggtttcagctgcgac
aggtgtaaactgggcttctttaacctggatcccaacaaccctcagggctgcacaccctgc
ttctgcttccagcactcgtctgtgtgcggcagcgccgaaggcttcagcgttcacaccatc
agctcctccttccacagagatgacgagcagtggaaagctcagcagcgtgatggagccagt
gtctctgtgcagtggtcttccagcggacaggaaatctccctcatctcagaagactacttc
cccatgtacttcatcgctccagagaagtttttggggaaccagatgctgagttacggacag
aacctgagtctaaatttccgggtggaccggcgggacacgcggctgtcggcagaggatctg
gttctggagggagccggtctgagggtggccgtccccctcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgactacccctgg
aggccgaccatcagccactctgacttccagaaactgctccacaatctgacctccatcaag
atcagaggcacctacagcgagaggagtgccggttaccttgacgacgtctccttggtgacg
gcgaggcgggctccaggtgtcccggcccgctgggtggagcagtgcacctgtcctcagggt
taccaggggcaacactgtgagcagtgcactctgggataccgccgtgcgcaaccagagctc
ggagccttcagcccctgtgagccctgcaactgcaacggccacagcgaggcctgcacgcct
gatactggagcgtgcgactgtcagcacaacaccgccggtctgagctgtgagcgctgtaag
gacggttactacggcgacgccacccaggggacgtccggtgactgtcagccatgtccgtgt
ccggccggagccacctgcgccgtcgtccccaaaaccagagaggtggtctgcaccaactgt
cccgccggcaccacaggaaagcgctgcgagctctgtgacgacggtttcttcggcgacccg
ctgggtcagaacggtccggtccgagtctgccgcgcctgcaagtgcagcgacaacatcgac
ctcaacgccgtcggcaactgcaaccgcgagaccggcgagtgtctgaagtgcatctacaac
accgacggcttcttctgcgaccgctgcaaggagggtttctatggcaacgccctggccacc
aaccttgccgacaagtgcaaaccatgttcctgctctgcgtctggcaccgtgggccgacag
accagctgctctcaggtcaccggacagtgtcagtgtcttcccaacgtcgccgagcgtgac
tgcagcgcctgcgagcccggcttcttcaacctgctcagcggcgacggctgcaaacggtgt
aactgtaatcctattggctccaccaacggtcagtgtgacatcattacaggacagtgcgag
tgccagccgggcgtcaccggtctgcactgcgagcgctgcgaggccaacttcttcggcttc
ggctcgtccggctgcaaaccctgcgactgcgaccccgagggctcccagtcgggtcagtgc
aaggaggacggtcgctgtgagtgccggcccggcttcgtgggcgctcggtgcgacatgtgt
gaggagaactacttctataaccgctcagcaccgggctgccagcagtgtccttcctgttac
ggcttggtcagagataaggtgaaccagcagaggcagaagcttcatgacctgcagactctg
atcgataacctcggctcaggtcaggacaccgtcagcgacaaagccttcgaggatcgtctg
aaggaggccgagcgagccatcatggagctcttggacgaagctcagaccagcaaagatgta
gacaaaggcctcatggaccgcctgaacaccatcaacaacactctgaccacccagtggaac
cgactgcagaacatccgcaacacggtggatgacaccggcactcaggccgaccgcgcccgc
aaccgggtccgcgacgctgaagacctgattgaccgcgcccggcaggagctggacaaggcc
aaggacgccatcggcaaagtggacattaaaccacccagcggatccggagatcccaacaac
atgacgctgttggctgaggaggctcgaaacctcgctgacaaacacaagatggatgctgac
cagatcgaaaagatcgccaaagacgccaacgacacgtcgaccaaagcgtacaacctgctg
ctgaagactctggacggagagggcaagacgagtcaggagatcgacgagctcaacaagaag
tacaacgaggcgaaggagctggcgaagaatctggagaaacaggccaacaaggttcaggcc
gaagctgaagacgctggaaaaaaagctttgaagatcttcgccaacctgaccagcctgccg
cccttcgacaccaaggcgctggaggatgaagccaacaagattaagaaggaggcgtccgat
ctcgacaagctcatcgataaaacggagaaagagtacaacgacctcagagatgacctgaag
ggcaaagagctggaagtccgcaagctgttggagaaaggcaaaagtgagcagcagactgca
gatcagctgttggctcgagcagatgctgccaaagctctggctgaggaggcggccaagaag
ggacagtccaccttcagagaggctgagaccatcctggaagacctcagagacttcgacaaa
agggtcaacgataacaagactgctgcagaggaggccttgaagaagatccccatcatcaac
gccaccatcattgccgccaatgggaagaccagagaggcagaagcagcgcttggcaacgct
gccaacgatgcccgagaggccaagaacaaggcggaggaggcggagaggattgctagcaat
gtgcagaagggctcagccaagaccaaggaggacgcagagaaggccttccaggatactgac
aagctggacaaagaggtcgacaacatgatggaccagctgagcgccgcagagcaggagctg
gccaggaagaaggccgaagccgaccaggacatgatgatggcaggaatggcgtcagataac
gctaaagaggcagaggacaatgcccgcaaggccaagggcgccgtgaagaacgtcctgggc
atcatcaccaacctgctggatcagctgggaaacattgacaaggtggacctgagcaaactc
aaccagatcgacgagtcgctgaagagggccaagggcaagatgaccgacagcatgctggac
aagaagctggcagagctgaatgacgttgcaaaaactcaaggcgacatgatcaacgactac
gaccggcagatccaagagatccgtgccgacatcgccaacctcaacgacatcaagaacacg
ttacccgagggctgcttcaacacgccgtctctggagaggccttaa
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integrated database retrieval system