Scomber japonicus (chub mackerel): 128372417
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Entry
128372417 CDS
T09718
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128372417 (ret)
04020 Calcium signaling pathway
128372417 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128372417 (ret)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128372417 (ret)
Protein kinases [BR:
sjo01001
]
Receptor tyrosine kinases (RTK)
RET family
128372417 (ret)
BRITE hierarchy
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
128372417
NCBI-ProteinID:
XP_053188429
LinkDB
All DBs
Position
14:complement(25204772..25226613)
Genome browser
AA seq
1109 aa
AA seq
DB search
MGSSCGFSRGIIAVVLLPLLLEGATALYFPQNKYIETIYVGQTAGTPILQIHAMLDNDSE
QPHYYLCWMNPYRGLSFNSWFSLDVITGILSLNKTLEESDFALLNQNSWSVTKLDLHATV
LPNFTKRPLCRGPLRISLDFVNATIPQCAQTDMKELCFPHRDASNPHITENRFPGPLRQL
RRLTRLNICPNYTISYSVESDTPAPFAVNENTTELIVTAPLDREESERYRLLLVCTVRTE
TLITKVETSLDVFVNDEDDNAPYVNGTDTADIVISYNRTKGGSFGTLYVFDRDLTPIYPI
DQSQNKYVGTLLNSDPWIKDTLDIKGTFTEKKVAYGGIRETVHNYQLVLKRNLYVTENRT
LQLDYLVNDTTYPGLQGTVLLHFNVTILPVQIRFANVTHMFTLTRRASLYAQVGRVCVEN
CQQADGFSVTYRLEVPDKNASADVQSCYAAISITQAPDEMWGLLYVNDTEALRRPECKDL
QYIVIAQEEYTQLETSTQIHIILDSDASKASQDSQQFLSCAENRRRGDCESARGLGATTG
RCQWRQGTERGISENYSTCSPDLGTCPDSFCDAVESKDASICPQDCTKEPVIGGHERGLR
NGIQAGHGTCYCYSQKCFCEKEAEEEVICDDMCKTIIATALLLSFIVSILLSSYFIHRYH
KNSPKPPIASAEMTFRRPAQAYPISFPANNLRRGSQESIETDTFKIPEDPKWEFPRKNLV
LGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHP
HVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGRDANRNSSYLENPDDRA
LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY
VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK
TGYRMERPENCTEEMYNLMLRCWKQESDKRPTFSDISKELEKMMVKSRDYLDLAASTPAD
ALLYDDALSEEDTPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRHDATNP
VFTRYANDSVYANWMALPSPAKAVDKLDS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaagttgtggtttctctcggggaatcatcgctgtggtgctgctgccactgctg
ctggaaggagctacagcactctacttccctcagaataagtacattgagacgatttatgtt
ggtcagacagcagggacgccgatcctccagatccacgccatgctggacaatgactctgag
cagccacattactacttgtgctggatgaacccctacagaggactgtccttcaattcctgg
tttagcctggatgtcatcaccgggatactatctttgaacaaaaccctagaggagagcgac
tttgctttgctaaatcaaaattcatggtctgtgacgaagttggacctgcatgccacggtg
ttacctaacttcaccaagaggcccctgtgcagaggcccccttcgaatcagcctggacttt
gtcaatgccacaataccgcagtgtgctcaaacagacatgaaggaactgtgcttccctcac
agagacgcctccaatccccacatcacagagaacaggttccccgggcccttgcggcaactc
cgacgtctcaccagactcaacatctgccccaactacaccatctcttacagcgtggagtca
gacacaccagcaccatttgctgtaaacgagaacaccacagagctgattgtgacggctcct
ttagaccgagaggagagtgaacgttataggctcctgctggtttgcacagttcggacagag
acgctcatcaccaaggtggaaacttcactggatgtttttgtcaacgatgaggatgataat
gcaccgtatgtgaatggaacagacacggcagatattgtcatcagctacaatcggacaaaa
ggtggctcctttggtaccttgtatgtctttgacagggatttaactcccatctatcccata
gaccagagtcaaaataagtatgtgggaaccttgctcaacagcgatccatggataaaagac
acattagatataaaaggcaccttcactgaaaagaaagttgcttatggtggcattcgagag
accgtccacaactaccagcttgtcctcaagaggaacttgtatgtgactgagaatcgcacc
ctgcagctggactacctagtcaatgacaccacctaccctggtctacagggaacagtgttg
ctgcacttcaatgtcaccatcttaccagtccaaattcgcttcgccaacgtcacacatatg
ttcacactgacacgcagggcttctctttatgcacaggttggcagagtctgtgtggaaaac
tgccagcaggctgatggcttcagtgtcacataccggctcgaggtgccagataagaacgcg
tctgctgatgtgcagtcctgctatgcagccataagcatcacacaggcccccgatgagatg
tgggggctgctctatgtgaatgacaccgaagcactgcgcagacctgagtgcaaagacctg
cagtacattgttatagcccaggaggagtacacacagctggagactagcactcagatccac
atcatacttgatagtgacgcaagcaaggccagtcaggacagccagcagttcctgtcctgt
gcagaaaacagacggcgaggagactgtgagtcagcccgaggcctgggggcgacgacaggg
agatgccagtggaggcaaggcacagagagaggaatatctgaaaattactcgacctgctcc
cctgacctgggaacttgtccagacagcttttgtgatgctgttgaaagcaaagatgcatca
atatgcccacaagattgcacaaaggaacctgtaatcggaggtcatgaacgaggcctgagg
aacggcatccaggctggccatggaacctgctactgctactctcagaaatgtttctgtgag
aaggaagctgaagaagaggtgatatgtgacgatatgtgtaagaccatcattgccacggct
ctgctcttgtccttcatcgtctccatcctcctgtcctcatacttcatccaccggtaccac
aagaactcacccaagcccccgatagcctcggctgagatgactttccgccggccagctcag
gcttatccaatcagcttccctgctaacaacctacgcagaggctcacaggaatccattgag
acagacaccttcaaaatacctgaggatccaaagtgggaatttcctcgtaaaaacctggtg
cttggcaagactttaggagaaggagagtttgggaaagttgtcaaggcaacggcattcagg
ctgaaaggaaaagctggttacaccactgtggctgtgaaaatgcttaaagaaaatgcctca
catagtgagctgcgtgacctgctgtcagaattcactttactgaagcaagtcaaccatccg
cacgtcataaagatgtatggagcgtgcagccaggacggtccattgtacctcattgtggaa
tatgccaagtatgggtcactccgcaacttcttgcgtgagagccggaaagttggcccaagc
tacatgggaagagacgccaaccgaaactccagctacttggagaacccagacgacagggca
ctcacaatgggcgacctgatctcctttgcatggcagatatcaagaggcatgcaatacctg
gccgaaatgaagcttgttcatagggaccttgcagcacgaaatgtccttgtggctgaagga
cgaaagatgaagatctcggactttggcctttcaagagacgtgtatgaagaggactcttat
gttaagaggagcaagggccgtatacctgtaaaatggatggcaatagagtccttgtttgat
cacatttacacaacacaaagtgacgtctggtcctttggtgtgctgttgtgggagatagta
acactgggaggtaatccatacccaggcattgctcctgaacgcctgtttaacctcctgaag
accggctacaggatggagagaccagagaactgcacggaggaaatgtataacctcatgcta
cgctgttggaaacaagaatcagacaagaggccgacattctcagacatcagcaaagagctg
gaaaagatgatggtgaaaagtcgggattacctggacctggcggcttccacgccagccgac
gccctgctgtacgacgacgccctctctgaagaggatacaccactagtggactgtaataac
gcccctctccctcgaaccctcccctccacatggattgaaaacaagctctatggcatgtca
tacccgaactggcctgagaagagcccggtaccactcaacagacatgatgccactaatcca
gtctttacaagatatgccaatgatagtgtttatgcaaactggatggctttgccttcaccc
gctaaagctgtggacaagcttgatagctaa
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