Scomber japonicus (chub mackerel): 128382356
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Entry
128382356 CDS
T09718
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128382356 (rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128382356 (rbbp8)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
128382356 (rbbp8)
BRITE hierarchy
Motif
Pfam:
CtIP_N
SAE2
HALZ
Herpes_IE2_3
LCD1
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
128382356
NCBI-ProteinID:
XP_053198328
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All DBs
Position
21:complement(18244953..18251211)
Genome browser
AA seq
653 aa
AA seq
DB search
MSSPSLSSMGPKPDDLFEDLWRQLGECHQNTLQELEEKVNKLKKDRCLDAQRLEVFYNRN
QQLKEQNKTLKDAVSLLEERLRVGECDRCSILEENLKNSQDQSERLITKLKHERNSLEDE
NRKLHAELQKLKMSCSGPQRASSPEVEDGIIPDSPILASSLPAANKLKKRKNIGKIKHVR
YAEMPLLQSNNSLFSDLNKGSGDNDVKNPGRAEVLVPNTCELETSQILKDDMEEVIAETC
GLELIKKPYMKTERTAGQQSSSQSPWKCNFRLNPDSTTARSPSLLPRVKRFSEEVSICKS
KRKKEEGEPEVQEEDRQKEDQHVESEPVQRTSAPLSNQSFKKESPGCKIQSAHNGTLKER
LNVSSASPTFKKPNWNVKEQANQRRNPLQGPNKSNIQHEAEDAEKKHKVEPMWSIDPAVA
LSMYDSEWRGDEQNEEPHTHGELADTDCTWVSHSLLQRRTGNSQDRGDGGLGEKANDSLD
QMFDTTAYGEYKSFINSHTQNQSRDHHHHDDEEEEEEEEEEKEEEDEDDDHPGSTPGHSK
GHKAGHPTFAHMVVVRKKDERRKLKGTTCKECEIYYAHLPEEEKKKKLSECSRHRYLYVP
PSTPENFWEVGFPSTQTCIDRGYIKEEKNPQARSRRRQPFNALFSPKRNQQDS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccagcctgagcagcatgggccctaaaccagatgacctgtttgaggattta
tggaggcaactaggagaatgtcatcaaaatacacttcaagaactggaggaaaaagtgaac
aagttaaaaaaggaccgctgtttagatgcacagagacttgaggtattttacaatcgtaac
cagcagctgaaggagcaaaacaaaaccctgaaggatgctgtcagtcttttggaggaaaga
ctccgagttggagagtgtgaccgatgttccatcttagaggagaacttgaaaaacagccaa
gatcagagtgagcgcctcatcaccaaactgaaacatgaaagaaacagcctggaggatgaa
aacagaaaacttcatgctgagctgcaaaagttaaagatgtcttgctcaggacctcagcgg
gcctcatccccggaagtggaagacggcatcatcccagactcccccatcctggcgagctcg
ctgcctgcagcaaacaaactgaagaagcgtaaaaatattggcaaaatcaaacacgttcgt
tacgcagagatgcctttactacaatccaacaactcactcttcagtgatctgaataaaggt
tcgggtgataatgatgtaaagaatcctggaagagcagaagtgcttgtacccaatacatgt
gaattggaaacctcccagattttaaaggatgacatggaagaggtgatagcagaaacatgt
ggccttgaacttattaaaaagccttacatgaaaactgaaagaactgcaggtcagcaaagc
agctcacaatctccctggaagtgtaattttcgtttaaatccagactcgaccacagcaagg
tcaccatctcttctccctcgtgtcaaacggttttcagaagaggtctccatttgcaaatca
aagcggaagaaggaggaaggtgagccagaggtgcaggaggaggacagacagaaagaagac
cagcatgtagaatctgaaccagtccaaagaacctctgcacctttaagcaatcaaagcttc
aagaaggagtcacctggctgcaagattcagtcagcacacaatgggactttgaaagaaagg
ctaaatgtttccagtgcaagtcctactttcaagaaaccaaactggaacgttaaagaacaa
gcaaaccagagaagaaaccctctgcagggtccgaacaagtcaaacatacaacatgaagca
gaagatgctgaaaagaagcacaaagtggagcctatgtggagcattgaccctgcagtcgcc
ctgtccatgtatgacagtgagtggagaggagatgagcaaaacgaagaaccacacacacac
ggggagttagcagacactgactgcacttgggtcagtcacagcttactgcagcgtcggaca
ggaaacagccaggacagaggagacgggggactaggcgagaaggcgaatgacagtttggat
caaatgtttgacaccacagcctacggggagtacaagtctttcatcaattcacacacacag
aaccagtctcgtgatcatcatcatcatgatgatgaggaggaggaagaggaggaagaagaa
gaaaaggaggaagaggatgaggatgatgatcatcctggcagcactccaggtcacagtaaa
gggcacaaagcaggacacccaacttttgcacatatggtagtagtacgcaagaaagatgag
agaagaaaactgaagggcactacctgcaaggaatgtgaaatatattacgctcatctccca
gaggaggagaaaaagaagaagctgtctgaatgctcgaggcaccgttatctttatgttcct
ccttccactcctgaaaatttctgggaagttggattcccatcaactcaaacatgcatcgac
agaggttatatcaaggaagagaagaatccacaggcacgttcccgcagaagacaacctttc
aatgctttattctccccaaagagaaaccagcaggacagctaa
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