KEGG   Scomber japonicus (chub mackerel): 128382356
Entry
128382356         CDS       T09718                                 
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8
  KO
K20773  DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    128382356 (rbbp8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128382356 (rbbp8)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-C complex
     128382356 (rbbp8)
Motif
Pfam: CtIP_N SAE2 HALZ Herpes_IE2_3 LCD1 CENP-B_dimeris
Other DBs
NCBI-GeneID: 128382356
NCBI-ProteinID: XP_053198328
LinkDB
Position
21:complement(18244953..18251211)
AA seq 653 aa
MSSPSLSSMGPKPDDLFEDLWRQLGECHQNTLQELEEKVNKLKKDRCLDAQRLEVFYNRN
QQLKEQNKTLKDAVSLLEERLRVGECDRCSILEENLKNSQDQSERLITKLKHERNSLEDE
NRKLHAELQKLKMSCSGPQRASSPEVEDGIIPDSPILASSLPAANKLKKRKNIGKIKHVR
YAEMPLLQSNNSLFSDLNKGSGDNDVKNPGRAEVLVPNTCELETSQILKDDMEEVIAETC
GLELIKKPYMKTERTAGQQSSSQSPWKCNFRLNPDSTTARSPSLLPRVKRFSEEVSICKS
KRKKEEGEPEVQEEDRQKEDQHVESEPVQRTSAPLSNQSFKKESPGCKIQSAHNGTLKER
LNVSSASPTFKKPNWNVKEQANQRRNPLQGPNKSNIQHEAEDAEKKHKVEPMWSIDPAVA
LSMYDSEWRGDEQNEEPHTHGELADTDCTWVSHSLLQRRTGNSQDRGDGGLGEKANDSLD
QMFDTTAYGEYKSFINSHTQNQSRDHHHHDDEEEEEEEEEEKEEEDEDDDHPGSTPGHSK
GHKAGHPTFAHMVVVRKKDERRKLKGTTCKECEIYYAHLPEEEKKKKLSECSRHRYLYVP
PSTPENFWEVGFPSTQTCIDRGYIKEEKNPQARSRRRQPFNALFSPKRNQQDS
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgagcagccccagcctgagcagcatgggccctaaaccagatgacctgtttgaggattta
tggaggcaactaggagaatgtcatcaaaatacacttcaagaactggaggaaaaagtgaac
aagttaaaaaaggaccgctgtttagatgcacagagacttgaggtattttacaatcgtaac
cagcagctgaaggagcaaaacaaaaccctgaaggatgctgtcagtcttttggaggaaaga
ctccgagttggagagtgtgaccgatgttccatcttagaggagaacttgaaaaacagccaa
gatcagagtgagcgcctcatcaccaaactgaaacatgaaagaaacagcctggaggatgaa
aacagaaaacttcatgctgagctgcaaaagttaaagatgtcttgctcaggacctcagcgg
gcctcatccccggaagtggaagacggcatcatcccagactcccccatcctggcgagctcg
ctgcctgcagcaaacaaactgaagaagcgtaaaaatattggcaaaatcaaacacgttcgt
tacgcagagatgcctttactacaatccaacaactcactcttcagtgatctgaataaaggt
tcgggtgataatgatgtaaagaatcctggaagagcagaagtgcttgtacccaatacatgt
gaattggaaacctcccagattttaaaggatgacatggaagaggtgatagcagaaacatgt
ggccttgaacttattaaaaagccttacatgaaaactgaaagaactgcaggtcagcaaagc
agctcacaatctccctggaagtgtaattttcgtttaaatccagactcgaccacagcaagg
tcaccatctcttctccctcgtgtcaaacggttttcagaagaggtctccatttgcaaatca
aagcggaagaaggaggaaggtgagccagaggtgcaggaggaggacagacagaaagaagac
cagcatgtagaatctgaaccagtccaaagaacctctgcacctttaagcaatcaaagcttc
aagaaggagtcacctggctgcaagattcagtcagcacacaatgggactttgaaagaaagg
ctaaatgtttccagtgcaagtcctactttcaagaaaccaaactggaacgttaaagaacaa
gcaaaccagagaagaaaccctctgcagggtccgaacaagtcaaacatacaacatgaagca
gaagatgctgaaaagaagcacaaagtggagcctatgtggagcattgaccctgcagtcgcc
ctgtccatgtatgacagtgagtggagaggagatgagcaaaacgaagaaccacacacacac
ggggagttagcagacactgactgcacttgggtcagtcacagcttactgcagcgtcggaca
ggaaacagccaggacagaggagacgggggactaggcgagaaggcgaatgacagtttggat
caaatgtttgacaccacagcctacggggagtacaagtctttcatcaattcacacacacag
aaccagtctcgtgatcatcatcatcatgatgatgaggaggaggaagaggaggaagaagaa
gaaaaggaggaagaggatgaggatgatgatcatcctggcagcactccaggtcacagtaaa
gggcacaaagcaggacacccaacttttgcacatatggtagtagtacgcaagaaagatgag
agaagaaaactgaagggcactacctgcaaggaatgtgaaatatattacgctcatctccca
gaggaggagaaaaagaagaagctgtctgaatgctcgaggcaccgttatctttatgttcct
ccttccactcctgaaaatttctgggaagttggattcccatcaactcaaacatgcatcgac
agaggttatatcaaggaagagaagaatccacaggcacgttcccgcagaagacaacctttc
aatgctttattctccccaaagagaaaccagcaggacagctaa

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