Scomber japonicus (chub mackerel): 128384231
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Entry
128384231 CDS
T09718
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128384231 (wdhd1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
128384231 (wdhd1)
BRITE hierarchy
Motif
Pfam:
Mcl1_mid
Ctf4_C
WD40
ANAPC4_WD40
HMG_box
eIF2A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
128384231
NCBI-ProteinID:
XP_053199787
LinkDB
All DBs
Position
1:34913337..34937069
Genome browser
AA seq
1139 aa
AA seq
DB search
MPSERKPMRYGHSEGHTEVCFDDSGKFIVTCGNDGDVRIWEGLDDDEPKFITVGEKAYSL
ALKNGKLVTASSNNTVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVAFDPKDDFLASASCDGSVVVWNIEEQTQVVSWPLLQKT
NDVTNAKSLCRLAWQPRTAKFLAVPVDTKVHLYERGSWDHVTTLSDDLLTQPINVVVWSP
CGQFLAAGCIGGFMAVWDVNSKLCVERQKHEKGFTVCSLAWHPSGSQIAYTDTEGCLGLL
DGLSTSASSTSTSSSTTTKVPQKDYDDLFDDDDDDRLMDDGQSDTNSPVKRAVARDNDDD
DDDDLMPATGRVRNRGAILDDENSLDTGSLKLGQGMYGDDDDAGSAIVPAAAPLVPLHPV
YEGPLPTPPQKAFQAGSTPAHLTHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAVHHAMH
LTNNLGHTIADISQEAVLLACPSTDELTSKLQCLHFSSWDTNKEWMVDLPKDEDARALCL
GQGWAAVATSTMMLRLFSIGGVQKEVFSLPGPVVCMAAHGEQLLIVYHRATGFDGEQALA
VQLLQFGRRKRQTINGEPLPLSHKAHLSWLGFTAEGTPCYVDSDGVVRMLNRSLGNTWTP
VCNTRETCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTTT
EKGQMEEQFWRSSLFHNHYGFLSSSGYEIDEDGQTQSQKEQQELLMKMFALSCKLEREFR
CVELAEMMTQNVVTLAIRYASRSRRMALAQRLSEIALEKANQIQEEEEEEEQEVEPQYSS
VRRTPSGYGHSEDTGKRNSSRHHHHHQQEEEEEEVVEEEDEQEMETEEAAETRKRLNPFA
KEAASPVQPTPTPIVKGGRANPFKVGGAGKPSPAAGQPRVTNILDNMTASRKSAPLSGSA
GKSSKNPVLKPLAPRPKTKTQSTLLQMTSQKTSNNKKSQAKAEPAADQQKQADVPPPASP
DNTENKRPKTGFQLWLDENRKSIVADQPDLQETDIIKEAMGRFRTLSAEERLSWTERAKG
HTGDADLKKRKRDGGEEGGEGVGDAENENGQTGADENSAKKKKSVDPSSRLSAFAFNKN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgaaaggaagccgatgcgttacggacactcggagggacacaccgaggtctgc
ttcgatgactctggaaagttcatcgtaacctgcggaaatgatggagatgttcggatatgg
gaaggtctggatgatgacgagccaaagttcatcactgttggagaaaaggcttactctctg
gctctcaagaatgggaagcttgtgacagcgagctccaacaacaccgtgcagatccacacg
tttccagacggggatcccgacggcatcctgacccggttcaccaccaacgccacacacgtc
accttcaacagcagcggctcaagagttgctgccggctccagtgacttcatggttaaggtg
gtggaagtgtcggacagcagccagcagaaaacactcagaggtcacgaagcgcctgtcctc
agtgtcgcttttgaccctaaagatgacttcctggcgtcggccagctgtgacggctccgtc
gtggtgtggaatattgaggagcagactcaggtggtcagttggcctctgctgcagaagacc
aatgacgtcactaacgccaaatctctgtgtcgactggcctggcagcccaggacggcgaag
tttttagcagttcctgtggacactaaggtacacctgtatgagcgagggtcctgggatcat
gtgaccacgctgtccgatgatctgctgacacagccgatcaacgtggtggtctggtctcca
tgtgggcagttcctggcagccggctgcatcgggggttttatggcagtttgggacgtgaac
agtaaactgtgtgtggaaagacagaaacatgagaagggcttcacggtgtgcagtctggcc
tggcacccatcaggcagccagatcgcctacacagacacagagggctgcctgggcctactg
gacggactcagcacctccgcatccagcaccagcaccagctcctccaccaccaccaaggta
ccacaaaaagactacgacgacttgtttgacgacgatgatgacgacagactcatggacgac
ggacagagcgacaccaactccccggttaaaagagctgtcgctagggacaacgacgatgac
gacgacgatgatctcatgcctgcaacagggcgggtgaggaacagaggggcgatcctggat
gatgagaactcgctcgacacgggctccctgaagctcggtcagggtatgtacggagatgac
gatgacgcaggtagcgccatagtaccagcagcggccccacttgtacccttgcatcccgtt
tatgagggacccctgccaacgccgccccagaaggcctttcaggcgggatccacccctgct
cacctcactcaccgcttcatgatgtggaactcggtgggaatcgttcgaggctacaacgac
gaccaggacaacgccatcgacgtggagtttcacgacacagccgtgcaccacgccatgcac
ctcaccaacaacctgggtcacaccatcgctgatatttcccaggaggccgtgctgctggcc
tgcccaagcacagacgagctcaccagtaagctgcagtgtcttcacttctcatcgtgggac
accaacaaggagtggatggtggacctgccgaaggacgaggacgcgagggcgttgtgtctg
ggtcaaggctgggcggcggtcgccaccagcaccatgatgctacgactcttctccatcggc
ggagtccagaaagaagtcttcagtctgccgggacccgtcgtctgcatggctgcacacgga
gagcagctgcttatagtctaccaccgggcaacgggcttcgatggagaacaggctctcgct
gtccagctgctgcagtttggtcgaaggaagagacaaaccatcaacggtgaaccgcttcca
ctctctcacaaagcccacctgtcctggctcggattcactgctgaaggaaccccctgctac
gtggactcagacggagtggttcggatgctgaatcgctccttgggaaacacttggacacca
gtatgcaacaccagagagacatgcaagagcaaatcggaccactactgggtggtgggagtg
cacgagaaccctcagcagctcaggtgtatcccatgtaaaggctccaggtacccccccacc
ctgcccagacctgccgtggccatcctgcccttcaaactgccgctgtgtcaaaccaccaca
gagaaaggacagatggaggaacaattctggcgttcgtccctcttccacaaccactacggc
ttcctgtcgtccagcggctacgagatagacgaggacggacagactcagtctcagaaggag
cagcaggagttgctcatgaagatgtttgcattgtcgtgtaagctggagcgagagtttcgc
tgcgtggagctggccgagatgatgacccagaacgtggtgactctggccattcgatacgcc
tccaggtccagacgcatggccctcgctcagcggctcagtgagatcgccctggagaaagcc
aaccagatccaggaggaagaggaggaagaggaacaggaagtggagccacagtactccagc
gtcaggcggactccatctgggtacggccacagtgaagacaccggaaaacgtaacagcagc
agacatcatcatcatcatcagcaggaggaagaggaggaagaggttgtagaggaagaggac
gaacaggagatggagacggaggaagcagcagaaaccagaaaacgtctgaatccgtttgct
aaagaagcggcatcgcctgtacagccgactccgacacccattgttaaaggaggacgtgca
aatcctttcaaggttggtggtgcagggaaaccttctcctgcagccggtcagcctcgagtg
accaacatcctggacaacatgacggccagcaggaagtcagctccactcagcggctctgcg
gggaaatcgagcaaaaaccccgtcctcaaaccgctggcccccagacccaaaacaaagact
cagtcgactctgcttcagatgacgagccagaagacgtccaataataagaagagtcaggcg
aaagcagagccggccgcagatcagcagaagcaggcggacgtccctcctccagcctcacca
gacaacacagagaacaagagaccgaagacgggcttccagctgtggttggatgagaacagg
aagagcatcgttgccgaccagcctgacctgcaggagacggacatcatcaaggaggccatg
ggacgcttcaggacgctgtcagcagaggagagactgtcgtggacagaaagagcaaaaggc
cacactggagatgcagatctgaagaagaggaaaagagacggaggagaagaaggaggagaa
ggagtaggagatgcggaaaatgaaaatggacaaactggagcagatgaaaatagcgcaaag
aagaagaaatctgtggatccttcctcgaggctttcagcgttcgcatttaacaaaaactaa
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