Sphingobium indicum UT26S: SJA_C1-20230
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Entry
SJA_C1-20230 CDS
T01201
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjp03036
]
SJA_C1-20230
Chromosome and associated proteins [BR:
sjp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SJA_C1-20230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
MTS
PsaF
Motif
Other DBs
NCBI-ProteinID:
BAI96857
NITE:
SJA_C1-20230
UniProt:
D4Z2M5
LinkDB
All DBs
Position
1:complement(2013073..2017380)
Genome browser
AA seq
1435 aa
AA seq
DB search
MTIMLPVANPVTPVSHAPVIFAAAHHLFGSLERGERIDAAALRSAMETAFGATDSVGAWD
WKSGYDACEVATVLFLRKYGPALFRKAASPAARLSALAKIAGLLPTHTRRSEESQALQQF
STPIPLGLAAMTAAAIMPGDVVLEPSAGTGLLAILAEISGGTLLLNELAGVRADLLASLF
PAINVTRVDAAQIDDHLAPDAVPSVVLMNPPFSTLANVSGHVADAGFRHIASALNRLAPG
GRLVAITGANVGPELPDWRDAFARLQERGRVVFSAAIDGAVYAKHGTTVSTRLTIIDKLS
AADPAAFPVSPGIAPNVGTLLDWIGAQVPPRLPVMLPEFSAPRPMAMPRAVRGYLARSAA
SRPIAAVAADPEGVELTYETMDWTPAEGTRLTDVIYEEYWLQSIRIPGSVPHPTKLVQSA
AMASIAPPKPSYRPMLPANVLGLLSDAQLETVIYAGEAHSDHLAGSWAVDETFDLVQAAA
DDATGAVRFRRGFMLGDGTGAGKGRQSAGIILDNWLRGRRKAVWISKSDKLIEDAQRDWS
ALGMERLLVTPLSRFPQGRPITLLEGVLFTTYATLRSDDRGEKVSRVRQIVEWLGSDWDG
VLIFDESHAMQNAGGGKGERGDAAPSQQGRAGLRLQHALPDARVVYVSATGATTVHNLAY
AQRLGLWGGEDFPFATRAEFVEAIEGGGVAAMEVLARDLRSLGLYTARSLSYDGVEYELI
EHRLTDEQHRIYDAYAGAFAIIHNHLDAAMQAANITGSEGTLNRQAKSAARSAFESAKQR
FFGHLLTSMKTPTLIRSIDRDLQDGHAAVIQIVSTGEALMERRLAEIPTEEWNDVRVDIT
PREYVLDYLAHSFPVQLYEPFSDGEGNLSSRPVFCDGQPVESREAVARRDELIEHLAALP
PVPGALDQIVQRFGTDMVAEVTGRSRRIVRKGERLSVENRAPSANLGETAAFMDDLKRVL
VFSDAGGTGRSYHAELSARNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIA
TNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESSYARDALRQLYLLLVR
GRIEGCSLERFETATGLKLMDSNGIKDELPPITTFLNRLLALTIELQGILFTAFEQLLDA
KVQGAIASGIYDVGLETLTAESFVVSDRKTIYTHPATGAETRLLTITERRRNRPMALADA
LAYAKDDLGKLLVNTKSGRAAVRVAAPSLMLDDGEIERRVRLIRPMEHHHASLKMMAESH
WEETDRGTFAAVWDREISEVPAFADSTIHIVAGLLLPVWKRLPNESTRVYRLQTDGGERI
IGRRVSPAWAANATVAGTTSLSAAEAHAALIDGKTILDLAEGLQLRRVRVMGANRIELSG
FTEAMRERLRAYGLFTEIISWKLRFFLSVDSAGVTMLGKLLETYPIVRIGEREAA
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatgttgcctgtggccaatccggtcacgcccgtttcccatgcccccgtcatc
ttcgcggccgcccaccatcttttcgggtctctcgaacgcggcgaacgcatcgacgccgcc
gcgctgcgctcggccatggagacagccttcggcgctacggattccgtcggcgcctgggac
tggaaatccggctacgacgcctgtgaggtcgcgacggttctgttcttgcgcaaatatgga
cctgcgcttttccgtaaagccgcgtctccggctgcacggctttccgccttggccaaaatc
gccggtctcctgccgacgcacacgcgccgttcggaggagagccaggcgctccaacaattt
tcgacacccattccccttggtcttgccgcgatgaccgcggcagccatcatgcccggcgac
gtcgtgctggagccttcggccggcacgggcctcctcgccatcctggccgagatcagcggc
ggcacgctcctcctcaatgaactggccggggtccgcgccgatctgctcgcctctctcttt
ccggccatcaatgtcacgcgcgtcgatgcggcccagatcgacgatcatctcgcgccggac
gcagtgccttccgtcgtgctgatgaatccgccgttttcgacgctggcgaacgtctccggc
catgtggccgacgccggcttccgtcatatcgcctcggcactgaaccgcctcgcgccaggc
ggacggctggtggcgatcaccggcgccaatgtaggtcccgaacttcccgactggcgcgac
gctttcgcccggttgcaagagcgtggccgcgtcgtgttctccgccgctatcgacggtgct
gtctatgccaagcacgggacgaccgtttcaacgcgcctcacaatcatcgacaagttgtcc
gctgccgatccggccgcgttcccggtctcgccgggcatcgcgccgaatgttggcacactg
ctcgactggatcggggcgcaggtgccgccgcggttgccggtaatgctgccggagttttcg
gcgccgcgtccgatggcgatgccgcgagccgtgcgcggttatctcgcgcgctcggctgcc
tcacgcccgattgccgccgtcgcggccgatcccgagggtgtcgaactgacctatgagacg
atggactggacgccggccgagggcacacgcctgaccgacgtcatctatgaagaatattgg
ttgcagtcgatccgcattcccggatcggtgcctcatcccaccaagctggtacagtcggcg
gccatggccagcatcgcgccgccgaagccaagctatcggccgatgctgccggcgaacgtc
cttggcctgctatccgacgcgcagcttgaaaccgtcatctatgctggcgaggcgcattcc
gaccatctcgccggttcgtgggcggtcgatgagaccttcgatctcgtccaggccgctgcc
gatgacgccacgggcgccgttcgtttccgccgcggtttcatgcttggcgacgggaccggc
gcgggcaagggccgccagtcggctggcattattctcgacaactggctgcggggccgtcgc
aaggccgtatggatcagcaagtccgacaagctgatcgaggacgctcagcgcgactggtcg
gcgctcggtatggagcgcttgttggtcacgccgctgtcgcgcttcccgcaaggacgcccg
atcacgctgttggaaggcgtcctatttacaacctatgccacgctacgctccgacgatcgt
ggcgagaaggtttcgcgcgtccggcagatcgtcgaatggttgggctccgattgggacgga
gtgctgatcttcgacgagagccatgcgatgcagaatgccggcggcggcaagggagaacga
ggcgatgccgccccctcgcagcaggggcgcgcgggccttcggctgcaacatgctcttcct
gatgcccgcgtcgtctatgtctctgcgaccggcgccacaaccgttcacaatctcgcttac
gcccagcggctcggtctatggggcggtgaggatttcccgttcgcgacccgtgccgaattc
gtggaggccatcgagggcggcggcgtcgcggcgatggaggtgctggcgcgcgatctgcgc
tcgctcggcctctataccgcgcgctcgttgtcctatgacggggtcgaatacgagcttatc
gagcaccggctcacggacgaacagcaccgcatctacgacgcctatgccggggcgttcgcg
atcattcacaaccacctcgacgcggcgatgcaggcggccaacatcaccggcagcgaaggc
acgctgaacaggcaggccaagtccgccgcccgctcagccttcgagtcggcgaagcagcgc
tttttcggccatctgctcaccagcatgaaaacgccgaccctgatccgttctatcgaccgc
gatcttcaggatggccatgccgccgtaatccagatcgtctcaaccggcgaagccctgatg
gaacggcgtctcgccgaaatcccgaccgaggaatggaacgacgtccgcgtggatataacg
ccgcgcgaatatgttctggattacctcgcccattccttcccggtccagctctacgagcca
ttcagcgatggcgagggcaatctctcctcacgcccggtcttttgcgacggccaacccgtc
gagagccgggaagccgtcgcccggcgcgacgagctgatcgagcatcttgccgcgcttccg
cctgtgcccggcgcgctcgaccagatcgtccagcgcttcggaaccgacatggtggctgag
gtgacaggccgctcgcgccgcatcgtgcgcaagggcgaacgcctcagtgtcgagaaccgc
gcgccgtcggcgaacctgggtgagacagccgccttcatggacgacctgaagcgcgtgctg
gtgttcagcgacgccggtggcaccgggcgcagctaccatgccgaactctcggcgcggaac
cagcgcctgcgtgtccattatctgcttgagccgggctggaaggccgacgccgccattcag
ggactcggtcgcaccaaccggacgaaccaggcgcagccgcctttgttcaggccgatcgcg
accaacgtgaaggcggaaaagcgctttctgagcacgatcgcccggcgtctcgacacgttg
ggcgcgatcacgcgcgggcaacgccagaccggcggccagggcctgttccgacccgaggac
aatctggagagcagctacgcccgtgacgcgctgcgccagctctatctcttgctcgttcgc
ggcaggatcgagggctgctcgctggaacgcttcgagacggcgaccggcctcaagctgatg
gacagcaatggcatcaaggatgaattgccgcccatcacaaccttcctgaaccgccttctg
gcgcttacaatcgagcttcagggcatcctctttaccgccttcgagcaactcctcgacgcc
aaggtgcaaggggctattgccagtggcatctatgatgtcggactggagacgctgacggcg
gagagcttcgtcgtcagcgaccgcaagacgatctacacccatccagcaacgggcgcggaa
acacggctgctcaccatcaccgagcggcggcgcaaccggccgatggcgttggcggacgct
cttgcctatgccaaggatgacctcggcaagctgctggtcaacaccaagtcaggccgtgcc
gccgtgcgggtcgctgcgccttccttgatgctggacgacggcgagatcgagcggcgcgtg
cgattgatccggccgatggagcatcatcacgcttcactgaagatgatggcggaaagccac
tgggaggaaaccgaccgcggaaccttcgccgctgtttgggaccgtgaaatctccgaggtc
ccggccttcgccgacagcaccatccacatcgtcgcgggccttcttctgccggtgtggaag
cgcctgccaaatgaatcgacgcgcgtttatcggcttcagaccgatggcggcgagcgcatc
atcggccgccgcgtctcgccggcctgggcggcgaacgccaccgtggctggaacaaccagc
ctgtcggcggcggaagcccatgccgcgctgatcgacggcaagaccatcctcgacctcgcc
gagggcctccagcttcgccgggtccgcgtcatgggcgccaaccggatcgagctgtccggc
tttaccgaagccatgcgcgaacgcctgcgcgcctacggtctcttcaccgagatcatttcg
tggaagctgcgcttcttcttatccgtcgattctgccggcgtgaccatgctcggcaagctg
cttgaaacctatccgatcgtgcggatcggcgagcgggaggccgcctga
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