Sphingobium indicum UT26S: SJA_C1-21180
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Entry
SJA_C1-21180 CDS
T01201
Name
(GenBank) putative porin
Organism
sjp
Sphingobium indicum UT26S
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Gene cluster
GFIT
Motif
Pfam:
Porin_O_P
USHBP1_PDZ-bd
SlyX
DUF3391
TolA_bind_tri
DivIC
DUF3138
Motif
Other DBs
NCBI-ProteinID:
BAI96952
NITE:
SJA_C1-21180
UniProt:
D4Z2X0
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Position
1:complement(2116534..2117973)
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AA seq
479 aa
AA seq
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MGARTFETGLLIAGVLALTPQAASAQSNAELQRQIDELKAQVQALTSALAASKSAPAAAE
PVAAAPAPAAAPAASLAAAPDQPPAATPASDPAPRSKAWYERLSLRGYTQMRYNAFLSGD
DSAPAGVSRLRSVHDSSISDRGGFSLRRARLVLQGDVSDRVSLYLQSDFATAVNNQAGSE
RREGFAQLRDAYADVFLDKGKDFRLRFGQSKVPFGWENMQSSSNRLTLDRSDAINSAVPG
ERDLGIVGYYTPPSVQKIWDRLAHDGQKLFGNYGAFGIGAFNGQGTNRTEQNRGLMKVAF
ATWPFELDGLGDALAGQVFEIGGSAMMNDVQPELRSGSVSPVAYDDDRVGIHAMLYPQPF
GIQAEWNWGRGPEYDRASQSILTKKLHGGYVQMMYRVPMGSIGALMPYGRWQYYRGGWKA
GTNAPRLETDELELGIEWQPWKALEFTLAFARMKRAEADERRTGRAEGNLIRTQVQWNY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaaggacgttcgaaaccgggttattgatcgcgggcgtgctggcgctgacgccg
caggcggcgagcgcccagagcaatgcggaacttcagcgccagatcgatgagttgaaggcg
caggtacaggcgctgacatcggcgctcgccgccagcaagtctgcgccggccgctgccgag
cctgtcgcggccgctcctgcgcccgccgccgcgccagccgcctccctggccgccgcgccc
gaccagccgccggccgccacgccggcatcggatccggcgccccggtcgaaggcgtggtac
gaacggctgtcgcttcggggctatacccagatgcgctacaatgccttcctgtccggtgac
gatagcgcgcctgcgggcgtttcccgcctgcgttcggtgcatgacagctctatctcggac
cgaggcggcttttcgctgcgccgtgcccggctggtgcttcagggcgacgtttccgaccgc
gtctcgctctatcttcagtccgatttcgccacggcggtgaacaaccaggcgggaagcgag
cggcgggagggattcgcccagttgcgggacgcctatgcggacgtcttcctggacaagggg
aaggattttcgcctgcgcttcggccagtccaaggtgcccttcggctgggagaacatgcaa
tcctcctccaaccgcctgacgctcgatcgcagcgacgcgataaacagcgcggtgcccggc
gaacgcgaccttggcatcgtgggctattacacgccgccttcggtgcagaagatatgggac
cggctggcgcatgacgggcaaaagctgttcggcaattacggtgcgttcggcatcggcgcc
ttcaacgggcagggcaccaacaggacggaacagaatcgcggcctgatgaaggtcgccttc
gccacctggccgttcgaactggacggtctgggcgacgcgttggcggggcaggtgttcgaa
atcggcggctccgcgatgatgaacgacgtgcagcccgaactgcgcagcggctcggtcagt
ccggtggcctatgacgacgatcgcgtcggcatccatgccatgctctaccctcagcccttc
ggcatccaggcggaatggaactggggcagggggccggaatatgaccgcgccagccagtcc
atcctgacgaagaagctgcatggcggctatgtgcagatgatgtatcgcgtgcccatgggt
tcgatcggcgcgctgatgccctatggccgctggcaatattatcgcggcgggtggaaagca
gggaccaacgcgccgcgcctggaaaccgacgaactggaactgggcatcgaatggcagcca
tggaaggcgctggaattcacccttgccttcgcccggatgaaacgcgccgaagccgacgag
cgccgcaccggccgcgccgaaggcaatcttatccgcacgcaggtgcagtggaattattga
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