Sphingobium indicum UT26S: SJA_C2-01390
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Entry
SJA_C2-01390 CDS
T01201
Name
(GenBank) putative allophanate hydrolase subunit 2/urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00220
Arginine biosynthesis
sjp00791
Atrazine degradation
sjp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
SJA_C2-01390
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
SJA_C2-01390
Enzymes [BR:
sjp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
SJA_C2-01390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
RnfC_N
DUF2118
NQRA
GCV_H
RimK
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
BAI98502
NITE:
SJA_C2-01390
UniProt:
D4Z7N3
LinkDB
All DBs
Position
2:161788..165384
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AA seq
1198 aa
AA seq
DB search
MSFDTVLIANRGAIATRIIRTLRRMGLRSVAVYSEADENSLHVAQADEAVCIGPARASDS
YLNIDAILDAARATGAGAIHPGYGFLAENVEFAEACAAAGIVFIGPTPDNIRTFGLKHSA
RALAAAHGVPLAPGTDLLTDEEEAAAAARAIGFPVILKATAGGGGIGMRICEDEGDVREG
FAAVARQGQSNFGDAGIFLERYIRRARHIEVQLFGDGEGRVMPLGERDCSLQRRNQKVVE
ESPAPLLPPAVRRDLIAAATRLGQAARYRSAGTVEFLYDAERQQFFFLEMNTRLQVEHGV
TEEVMGIDLVEWMIRGGAGDFAFLDADPPQQRGHSVEVRLYAEDPALDYRPTSGTLTAVQ
FPADIRAETWCMAGSEVSIWYDPMLAKLIVHAPTRDEAIGKMQAALDRSRVDGMETNLRW
LRDVVRSDAFVSGEVSTRALEGVVSNPSSIRVVSGGTATTVQDWPGRQKLWAVGVPPSGP
MDDQSFRIGNRLLGNPEGTAGLEVTVTGPTLDFAAPARICLTGADFGATLDGQPVQRGAA
VDVEAGQTLALGRASGGGLRGYILFAGGLDIAPYLGSRSTFELGQFGGHAARRLLAGDTL
HLAGDRTDAPLASADMPDLSTRWTLRVLYGPHGAPDFFTDADIEAIVAAEWQVHYNSNRT
GVRLIGPKPQWARADGGEAGLHPSNIHDNPYAIGAVDFTGDMPIILGPDGPSLGGFVCPF
VVIAADRWKIGQLAPGDKLRFAPVNIDDAAVADALQRRLVASGSVEDAAPVRPIEMLSPI
LARIPEGPGRPRTVYRQQGDRNILVEYGPIVLDIELRIRVHALMTELERLALPGIVDVVP
GIRSLQLHFDGEQLDQRAALAALISAEERLGDLEDFTIPSRIVHMPLSWRDPATIETIEK
YMGGVRADAPWCPDNIEFIRRVNGLPDAAAVERLIFEANYLVLGLGDVYLGAPVATPVDP
RHRLVTTKYNPARTWTPPNVVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTHRQTDVFVE
GKPWLLRFFDQIRFYPVSAEELAEWRRDFPSGRRSIRIEPSEFRLADYRAFLAGNADAIA
AFEARRQAAFDEERAEWQRNGEFDRVTSLTEADVAGPDAIDVPDGADLVETPFGGSIWKL
LVAVGDEVKAGDTIAVIEAMKMECAVQSPATGTVAAIYVQERQALQPGAPMLALRAVA
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatacggtcctcatcgccaatcgcggcgccatcgccacgcgcatcatccgc
accttgcggcgcatgggcctgcgctcggtcgcggtctattcggaggcggacgaaaattcc
ctgcacgtcgcgcaggcggacgaggcggtctgcatcggcccggcgcgggcgtcggacagc
tatctcaacatcgacgccatattggatgccgcccgcgccacgggcgcgggcgcgatccat
ccgggctacggcttccttgccgaaaatgtggagtttgccgaagcctgcgccgccgccggc
atcgtcttcatcgggccgacgccggacaatatccgcaccttcggcctgaaacacagcgcg
cgcgccctggcggcggcccacggcgtgccgctggcgcccggcaccgacctgctcaccgac
gaagaggaagccgccgccgcggcgcgggcgatcggcttccccgtgatcctgaaggcgacg
gccggcggcggcggcatcggcatgcgcatctgcgaggatgaaggcgacgtccgggaaggc
tttgccgcggtggcccgccaggggcagagcaatttcggcgacgccggcatcttcctggaa
cgctatatccgccgcgcccgccacatcgaagtccagctgttcggcgacggcgaaggccgc
gtcatgccgctgggggagcgcgactgttcgctccagcgccgcaaccagaaggtggtcgag
gaatcgcccgcgcccctgttgccgcccgccgtccgccgcgacctgatcgccgccgccacg
cggctgggccaggccgcccgctaccgttccgccgggacggtcgagttcctctacgacgcc
gaacgccagcaattcttcttcctggagatgaacacgcgccttcaggtcgaacatggcgtc
accgaagaggtgatgggcatcgacctggtcgaatggatgatccgcggcggcgcgggcgat
ttcgccttcctcgatgccgatccgccccagcagcgcggccattcggtggaggtgcggctc
tatgccgaagatccggcgctcgactatcgcccgacatcggggacgctgacggcggttcag
ttccctgccgacatccgcgccgaaacctggtgcatggcgggcagcgaggtcagcatctgg
tacgatcccatgctggccaagctgatcgtccacgccccgacccgcgacgaggcgatcggg
aaaatgcaggccgcgctcgaccggagccgggtcgacggcatggagaccaacctgcgctgg
ctgcgcgacgtggtccggtccgacgccttcgtcagcggcgaagtgtccacccgcgctctc
gaaggcgtcgtttccaacccctccagcatccgcgtggtcagcggcggcacggccaccacc
gtccaggactggccgggccgacagaaattatgggcggtcggcgttccgccttcgggtccg
atggacgatcaatccttccgcatcggcaaccggctgctgggaaatccggagggcaccgcc
gggctggaggtcacggtgaccggcccgacgctggatttcgccgcgccggcgcgcatctgc
ctcacgggcgccgatttcggggcgacgctggatggacagccggttcaaaggggcgcggcg
gtcgacgtggaggccgggcagacgcttgccctcggccgcgcgtcgggcggcggcctgcgc
ggctatatcctgttcgccggcggcctcgacatcgcgccctatctcggcagccgcagcacc
ttcgaactgggccagttcggcgggcatgccgctcgccggctgctggcgggcgacaccctg
cacctggcgggcgatcgaacggacgcgccgctcgcctccgccgacatgccggatctttcg
acgcgatggaccctgcgcgtcctctatggtccccatggcgcgccggatttcttcaccgac
gccgatatagaggccatcgtcgcggccgaatggcaggtccactacaacagcaatcgcacc
ggcgtccgcctgatcggacccaagccgcaatgggcccgcgccgacgggggcgaggcggga
ttgcacccgtccaacatccacgacaatccctatgccatcggcgccgtcgacttcaccggc
gacatgccgatcatccttggcccggacggcccttcgctcggcggtttcgtctgccccttc
gtggtgatcgcggccgaccgttggaaaatcggccagcttgcgccgggcgacaagctgcgt
ttcgcccccgtcaatatcgacgatgccgccgtggcggacgcgctgcaacggcggctggtc
gcctccggatcggtggaggatgccgccccggtgcggccgatcgagatgctctcgcccatc
ctcgcccggattccggaagggcctggccgcccccgcaccgtctaccgccagcagggcgat
cgcaacatcctggtcgaatatggtcccatcgtgctcgacatagagcttcggatacgggtc
cacgcgctgatgacggagctggaacggctggctttgcccggcatcgtcgatgtcgttccg
ggcatccgatcgctgcaactgcatttcgacggcgagcaactggaccagcgcgccgcgctg
gcggcgctgatctccgcggaggagcgcctcggcgaccttgaggatttcaccattccctcc
cgcatcgtccatatgccgctcagctggcgcgatcccgcgacgatagagacgatcgagaaa
tatatgggcggcgtgcgcgcagacgcgccatggtgccccgacaacatcgaattcatccgc
cgggtcaacggccttcccgacgcggcggcggtggagcggctgatcttcgaggcgaactac
ctcgtcctggggctgggcgacgtctatctgggcgcgccggtcgccaccccggtcgatccc
cggcaccggctcgtcaccaccaagtacaatccggcgcgcacctggacgccgcccaatgtc
gtgggcatcggcggcgcctatatgtgcatctacgggatggaagggccgggcggctatcaa
ctgttcggccgcaccatccaggtgtggaacacgcatcgccagaccgacgtcttcgtcgag
gggaagccatggttgctgcgcttcttcgaccagatccgcttctatccggtcagcgcggaa
gaactggccgaatggcgccgcgatttccccagcgggcggcgctccatccggatcgagccg
tcggagttccggctggccgactatcgcgccttcctggccgggaatgccgacgccatcgcc
gcgttcgaggcgcgccgccaggccgccttcgatgaggagcgcgccgaatggcaaaggaac
ggggagttcgaccgcgtcaccagcctgacggaggccgacgtcgccgggccggacgccatc
gacgttccggacggcgccgatctggtcgaaacgccctttggcggcagcatctggaaattg
ctggtcgcggtgggcgacgaagtgaaggcgggcgacacgatcgccgtcatagaggcgatg
aagatggaatgcgcggtgcaaagccccgccacgggcacggtcgcggcaatctatgtgcag
gagcggcaggccctgcagcccggcgcgccgatgctggcgctgagggccgtggcatga
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