Sanguibacter keddieii: Sked_22700
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Entry
Sked_22700 CDS
T01214
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ske
Sanguibacter keddieii
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ske03009
]
Sked_22700
Enzymes [BR:
ske01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Sked_22700
Ribosome biogenesis [BR:
ske03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sked_22700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACZ22185
UniProt:
D1BIK8
LinkDB
All DBs
Position
complement(2524956..2525891)
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AA seq
311 aa
AA seq
DB search
MTTRTLPVPDGLAGERVDAALARMLGLSRTVAAQIASDGGVRLDGRALGKSDRLAPDSWI
EVDVPDPSAPRGPVVVAEPVPGMKIMYDDDDVVVIDKPVGVAAHPSVGWTGPTVVGALIA
AGYTIATSGAAERQGIVHRLDVGTSGLMVVAKSEHAYSVMKRAFKERTVEKVYHALVQGH
PEPTTGTIDAPIGRHPNHDYKFGVVADGKPSVTHYEVLEMLSAASLVEVHLETGRTHQIR
VHFSALRHPCVGDLTYGADPRLAEKVSLTRQWLHAKRLGFEHPSTGEWVEVVSEYPEDLA
AALEVVRGEYR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccgcacgctccccgtccccgacgggctcgccggcgagcgggtcgacgcggcc
ctggcccgcatgctcgggctctcccggaccgtcgcagcccagatcgcgtccgacggcggg
gtccgcctcgacggacgtgccctgggcaagtccgaccgcctcgcaccggactcgtggatc
gaggtcgacgtgccagacccgtccgcacctcgcgggcccgtcgtggtggccgagccggtc
cccggcatgaagatcatgtacgacgacgacgacgtggtggtcatcgacaagcccgtcggc
gtcgcggcgcacccctccgtggggtggaccggcccgaccgtggtcggtgcgctgatcgcc
gcggggtacacgatcgcgacctcgggagctgccgagcgccagggcatcgtccaccgtctc
gacgtggggacctcgggcctcatggtcgtggccaagagcgagcacgcgtactcggtgatg
aagcgcgccttcaaggagcgcaccgtcgagaaggtctaccacgcgctcgtccagggacac
cccgagcccaccacggggaccatcgacgcgccgatcggccgccacccgaaccacgactac
aagttcggggtggtcgccgacggcaagccctcggtgacgcactacgaggtgctcgagatg
ctctccgccgcctccctcgtcgaggtgcacctggagaccgggcgcacccaccagatccgc
gtgcacttctcggcgctgcgccacccctgcgtcggtgacctcacctacggtgcggacccg
cgcctcgcggagaaggtctcgctgacgcgccagtggttgcacgccaagcggctcggcttc
gagcacccctcgacaggcgagtgggtcgaggtggtcagcgagtaccccgaggacctcgcc
gcagccctcgaggtcgtccggggggagtaccgatga
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