Sanguibacter keddieii: Sked_28060
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Entry
Sked_28060 CDS
T01214
Name
(GenBank) alpha-1,6-glucosidase, pullulanase-type
Organism
ske
Sanguibacter keddieii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Pullul_strch_C
Pullulanase_N2
PT
CBM_48
Alpha-amylase_C
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
ACZ22708
UniProt:
D1BB07
LinkDB
All DBs
Position
complement(3128554..3134760)
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AA seq
2068 aa
AA seq
DB search
MAMLGASLAGVAGTVTAAPSAAEPAAPRLVGSLQTELGCAEDWAPACDAGALSPTATDGL
FSTTVTLPGGDYELKVLAGTTWDDPSWGRAGATGADAANIRLHTAGEAELEVFFDTETGR
TSFVPTADVPEPTEADAPAPVRQPGGDEQFYFVLTDRFANGDTANDTGYVTVDGVPATDR
LEHGFDPTDKGFYHGGDIAGLRQNLDYIEGLGTTAIWLTPSFENRPVQGTGADASAGYHG
YWITDFLSIDPHLGTNEELDGLIAEAHARDIKVYFDIITNHTADIIDYEEGEYTYRPTTT
EPYTPFVPIGLEDVKNPAWLNDPAFYNNRGNSTWAGESVILGDFDGLDDLDTSQQAVVDG
FVDIYQHWADAGIDGFRIDTVKHVDFSFWEQWTTAIKEATDNPEFFMFGEVYDADPTKLS
PYVRDTDMDSVLDFTYQSAAAAFADGSGPRVLQRLFDGDAYYTTPTKNAHALPTFLGNHD
MGRLGYVVKGREDALQRSELAHSLMYLTRGQPVVYYGDEQGFVGSVGDGKDKNSRQSLFD
SQVAEFRDQALLDGSSGAGDHYGTDGALYTHIAGLAALRSAHPALSDGAQVEQHVAAGAG
VYAFSRVDTAADAPAEYLVAVNNATTESTVELTALTPDATFAPLYGTDATATSGADGTVA
VTVPALGAVVLQAQSPLTADADPVAPTFSTPVLGQGLEGLQEIAVDLGTERYAETTISSR
VVGASEWELLGTIDDGAPRLFQDVADVPPGTVMEYRAVVRDADDRLTQTVVSASVGDDHG
TGAPLPTDGPPPLRDVTVSVAGTMNPAMGCSAAWMPACDDAVLSERAGSVFSGTWTLPAG
DYEYKVAIDQAWTESYGRDGENVTFTLPAEQEVTFVYDDLTHRVAHFFEGSPDGRLAVAA
GSFQTHLGCAGDWDPTCLGSWMAPDGDDTYTLTTNRIPAGLYETKTAFGRGWDGALPAQN
LGFEVPVDWATMVFTLDATTGEMTVAADQSVPGDGDRAFWLDARTLALPAAAVPDGGDPA
ARTWTLHGAPTGGITVADGVVTTPGGSDLPLTLLPDGVPEDLQARHPLVDGYLAVSLDEA
VTDEQVAELLTGELRLTQSGPTGLEYSTGVQVAGVVDDLFTVASDVTLGATWDGDVPTLA
LWAPTARSVTTRVWLDGDGVAAGNPTDVPAERQADGTWVTQGAAGWKDAAYVYDVEVYVH
STGAVEHNVVTDPASVALTLNSEQSVLVDLSDPAYMPSVWADTPAPVVERDVDRSIYELH
VRDFSISDESVPEAERGTYMAFTRESDGMKHLRTLAAAGLNTVHLLPTFDIATIEEDRAL
QDTTDDLSGFAPDSTEQQAAVAAVADTDAFNWGYDPLHFTAPEGSYATEGNQDGGARVAE
FRSMVGGLHASDLQVVLDQVFNHTAASGQSANSVLDRVVPGYYQRLSATGEVETSTCCEN
VATENAMAERLMVDSVVTWARDYKVDGFRFDLMGHHSRDTMLAVRAGLDALTLEKDGVDG
SAVYLYGEGWNFGEVADNALFEQATQGQLGGTGIGTFSDRLRDAVHGGSPVSGESIFQQG
FGTGLGTDPNGRPTSTADPSVVNDGSAEEYASLAHSADLVRLGLAGNLRDLTFETSTGTV
QRGDEIDYNGQPAGYADSPEEVVTYVDAHDNETLFDILTLKLPVETSMADRVRMNTLSLA
TATLSQTPSFWHAGTDLLRSKSLDRDSYNSGDHFNRVDWTGQESTFGSGLPPEEKNGDKW
DYMRPLLADPALKPGPDDMAAAHAAATELLALRYSTPLFRLGEASLITEKVTFPGSGADA
TPGVIVMHVDDTVGEDVDPALDGMLVVFNASPDAVTETLDGLVGRDLALSTVQAEGADAV
VRETAWDAASGQVTVPARTVAVLTEAQVGGPTEPTEPPTEEPTVPPTEEPTVSPTDEPTE
QPTDGAGDAVVTLSAGTVRAGENLTVDASGFAPGETVQVWLNSEPQLLVARAAGDDGALS
VQVTVPLSTAPGDHTVRAVGLASGIDGSAALTVLAADGSGADGDGASGPVGQLSLTGAAP
LLAAALALLLLAAGVATVVARRRRDGVG
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
gtggcgatgctgggggccagcctcgccggggtggccggcaccgtgacggccgcgccgtcc
gccgccgagcccgctgctccgcgcctcgtcggctcgctccagaccgagctcggctgcgcc
gaggactgggcgcccgcctgcgacgccggggcgctctcgcccacggccaccgacggcctc
ttctcgaccaccgtcacgctccccggcggcgactacgagctcaaggtgctcgccgggacc
acctgggacgacccgtcgtggggccgcgccggggcgaccggtgccgacgccgccaacatc
cgcctgcacaccgccggcgaggccgagctcgaggtcttcttcgacaccgagaccggccgc
acgagcttcgtgcccacggcggacgtccccgagccgaccgaggccgacgcgcccgcgccg
gtgcgccagccgggcggcgacgagcagttctacttcgtcctcaccgaccggttcgccaac
ggcgacaccgccaacgacacgggctacgtgacggtcgacggcgtgccggcgaccgaccgg
ctcgagcacggcttcgacccgacggacaagggcttctaccacggtggcgacatcgccggg
ctgcgccagaacctcgactacatcgaggggctcggcaccaccgcgatctggctcacgccg
tccttcgagaaccgccctgtccagggcaccggcgccgacgcgtcggccggctaccacggc
tactggatcaccgacttcctgtcgatcgacccgcacctcgggaccaacgaagagctcgac
ggcctcatcgcggaggcgcacgcccgcgacatcaaggtctacttcgacatcatcaccaac
cacacggccgacatcatcgactacgaggagggcgagtacacctaccgcccgaccacgacg
gagccgtacacgcccttcgtgccgatcggcctcgaggacgtcaagaaccccgcctggctc
aacgacccggcgttctacaacaaccgcgggaactccacctgggcgggggagtcggtgatc
ctcggcgacttcgacgggcttgacgacctcgacacctcgcagcaggccgtggtcgacggc
ttcgtcgacatctaccagcactgggctgacgccgggatcgacggcttccggatcgacacc
gtcaagcacgtggacttctcgttctgggagcagtggaccaccgccatcaaggaggccacg
gacaaccccgagttcttcatgttcggcgaggtctacgacgccgacccgaccaagctgtcg
ccgtacgtgcgcgacaccgacatggactccgtcctcgacttcacctaccagtcggccgcg
gcggccttcgccgacggcagcggccctcgcgtcctccagcggctcttcgacggcgacgcg
tactacacgacgccgaccaagaacgcgcacgccctgccgaccttcctcggcaaccacgac
atgggccgcctcggctacgtcgtcaaggggcgcgaggacgcgctccagcgctccgagctc
gcgcactcgctcatgtacctcacccgcggccagcccgtcgtctactacggcgacgagcag
ggcttcgtggggagcgtcggcgacggcaaggacaagaactcccggcagtcgctcttcgac
tcgcaggtcgccgagttccgggaccaggccctgctcgacgggtcctccggcgccggtgac
cactacggcaccgacggcgcgctctacacgcacatcgcgggcctcgcggcgctgcgcagc
gcgcaccccgcgctgtccgacggtgcgcaggtcgagcagcacgtcgccgcgggagcaggc
gtctacgccttctcccgcgtcgacaccgcggccgacgccccggccgagtacctcgtggcc
gtcaacaacgcgacgacggagtcgacggtcgagctgaccgccctcaccccggacgcgacc
ttcgcgccgctctacggcaccgacgccaccgcgacctccggggccgacggcaccgtcgcg
gtgaccgtcccggccctcggcgccgtcgtcctgcaggcgcagtcgccgctgaccgccgac
gcagaccccgtggcaccgaccttcagcaccccggtgctcggccagggcctcgaggggctc
caggagatcgcggtcgacctcggcaccgagcgctacgcggagacgaccatctcctcccgc
gtggtcggggcctcggagtgggagctgctcggcacgatcgacgacggtgccccgcgcctg
ttccaggacgtcgccgacgtcccgcccggcacggtgatggagtaccgcgccgtcgtgcgc
gacgccgacgaccgtctcacgcagaccgtcgtgtcggcgagcgtcggtgacgaccacggc
accggtgcaccgctgcccaccgacggcccgccgccgctccgcgacgtcaccgtctcggtg
gccgggaccatgaacccggcgatgggctgctcggccgcctggatgcccgcctgcgacgac
gcggtgctctccgagcgtgccgggtcggtcttctccgggacctggacgctccccgccggg
gactacgagtacaaggtcgccatcgaccaggcctggaccgagagctacgggcgggacggt
gagaacgtcacgttcaccctcccggccgagcaggaggtcaccttcgtctacgacgacctc
acccaccgggtggcgcacttcttcgagggcagccccgacgggcgcctcgccgtcgccgcc
gggagcttccagacgcacctcggctgcgcgggcgactgggaccccacctgcctcggctcg
tggatggcgccggacggtgacgacacctacacgctgaccaccaaccgcatcccggccggg
ctctacgagaccaagacggccttcggtcgcggctgggacggtgctctgccggcgcagaac
ctcggtttcgaggttcccgtcgactgggccacgatggtcttcacgctcgacgcgacgacg
ggagagatgacggtggctgctgaccagagcgtccccggggacggcgaccgcgcgttctgg
ctcgacgccaggaccctcgcgctcccggccgcggccgtgccggacggtggggaccccgcc
gcccgcacctggacgctgcacggcgcgccgaccggcgggatcaccgtggccgacggcgtc
gtcacgacgccgggaggctccgacctcccgctcacgctcctcccggacggtgtccccgag
gacctccaggcccggcacccgctggtggacggctacctggccgtctccctcgacgaggcc
gtgaccgacgagcaggtcgccgagctgctcaccggggagctgcgtctcacgcagtccgga
cccacgggtctcgagtactcgaccggcgtgcaggtcgccggggtcgtcgacgacctcttc
accgtcgcctcggacgtcacgctcggggccacgtgggacggcgacgtgcccaccctcgcg
ctgtgggccccgaccgcgaggtcggtgaccacccgcgtgtggctcgacggcgacggggtc
gccgcgggcaacccgaccgacgtcccggccgagcgtcaggccgacggcacctgggtcacc
cagggtgcagccggctggaaggacgcggcctacgtctacgacgtcgaggtgtacgtgcac
tcgacgggcgccgtcgagcacaacgtcgtcaccgaccccgcgtcggtggcgctcacgctc
aactccgagcagtccgtgctggtcgacctcagcgacccggcgtacatgccgagcgtgtgg
gccgacaccccggcgccggtcgtcgagcgcgacgtcgaccgcagcatctacgagctgcac
gtccgtgacttctcgatcagcgacgagtccgtcccggaggcggagcgtggcacctacatg
gcgttcacgcgagagtcggacggcatgaagcacctgcggaccctcgcggccgcaggcctc
aacaccgtgcacctgctgcccaccttcgacatcgccacgatcgaggaggaccgcgcgctg
caggacaccaccgatgacctcagcgggttcgcgcccgactcgaccgagcagcaggccgcc
gtggccgccgtcgcagacacagacgccttcaactggggctacgacccgctgcacttcacc
gccccggagggctcctacgcgaccgagggcaaccaggacggcggcgcccgcgtcgccgag
ttccgctcgatggtcggcggcctgcacgcgagcgacctgcaggtggtcctcgaccaggtg
ttcaaccacaccgcggccagcgggcagtcggcgaattccgtgctcgaccgtgtggtcccc
ggctactaccagcggctctccgcgacaggcgaggtcgagacctcgacgtgctgcgagaac
gtcgccacggagaacgccatggccgagcgcctcatggtcgactcggtcgtcacctgggcc
cgcgactacaaggtcgacggcttccgcttcgacctcatgggccaccactcccgcgacacc
atgctggccgtgcgggccgggctcgacgccctgacgctcgagaaggacggtgtcgacggg
tccgcggtgtacctctacggagagggctggaacttcggggaggtcgccgacaacgcgctc
ttcgagcaggccacccagggacagctcggcggcaccggcatcgggaccttctccgaccgc
ctgcgcgacgccgtccacggcggcagccccgtctcgggggagagcatcttccagcagggc
ttcggcaccgggctcggcaccgacccgaacggccgaccgaccagcacggccgacccgtcg
gtcgtcaacgacggctcggccgaggagtacgcgagcctcgcgcacagcgccgacctcgtc
cgcctcggcctcgccggcaacctgcgcgacctcaccttcgagacgtccacgggcaccgtc
cagcgcggtgacgagatcgactacaacggccagccggccgggtacgccgactcgcccgag
gaggtcgtcacctacgtcgacgcgcacgacaacgagacgctcttcgacatcctcaccctc
aagctgcccgtcgagacctcgatggccgaccgggtgcggatgaacacgctgtccctcgcg
acggcgaccctctcgcagacaccgtcgttctggcacgccgggaccgacctgctgcgcagc
aagtcgctcgaccgggacagctacaactcgggtgaccacttcaaccgggtggactggacg
ggccaggagagcaccttcggctcgggcctgccgcccgaggagaagaacggcgacaagtgg
gactacatgcgcccgctgctcgccgacccggcgctcaagcccggaccggacgacatggcc
gcggcgcacgccgccgcgaccgagctgctggcgctgcggtactcgacgccgctgttccgc
ctcggcgaggccagcctcatcaccgagaaggtcaccttccccgggtcgggagccgacgcg
acccccggcgtgatcgtcatgcacgtcgacgacaccgtgggcgaggacgtcgaccccgcg
ctcgacgggatgctcgtcgtcttcaacgcgagcccggacgccgtcaccgagacgctcgac
ggactcgtcggacgtgacctcgcgctctcgaccgtccaggccgagggagccgacgccgtg
gtccgcgagaccgcgtgggacgcggcctccgggcaggtcaccgtgccggcgcgcacggtc
gcggtcctcaccgaggcgcaggtcggcggcccgaccgagcccacggagcctccgacggag
gagccgacggtgccgcccacggaggagccgacggtgtcgccgacggacgagccgacggag
cagccgaccgacggtgcgggtgacgccgtcgtcacgctctcggccgggaccgtccgggca
ggggagaacctcaccgtcgacgcctccggcttcgcgccgggggagaccgtccaggtgtgg
ctcaactccgagccgcagctgctcgtcgcccgggcagccggtgacgacggtgcgctctcg
gtccaggtgaccgtgccgctgagcacggcgcccggtgaccacacggtgcgagccgtcggg
ctcgcgtcggggatcgacgggtccgcggcgctcaccgtgctcgcggctgacggcagcggt
gctgacggtgacggcgcgtctggtcccgtgggccagctgagcctcacgggagccgcgccg
ctcctggccgcggccctggcgctgctgctgctggcggcgggggtggccacggtcgtcgcg
cgtcgccgccgggacggcgtcggctag
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