Sinorhizobium kummerowiae: PZL22_003099
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Entry
PZL22_003099 CDS
T09063
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
skm
Sinorhizobium kummerowiae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_7
HTH_50
AAA
AAA_2
Mg_chelatase
HTH_22
MCM
ThiG
HTH_23
Phage_AlpA
RWP-RK
HTH_29
HTH_28
FleQ
HTH_17
dnstrm_HI1420
TetR_N
AAA_22
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
WHS95321
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Position
complement(1722667..1724208)
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AA seq
513 aa
AA seq
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MTSHILVIDDDPVQRRLLTNMIERLGHVAHLADNGRSGLELLQRKGGIINVILLDLLMPE
MNGHGLLEALAERGIDIPVIVQTGQGGIETVVQAMQAGAFDFLVKPVSPERLSIALGNAL
KMASRDGKVKTARRPRGGAVGFDDIVSASPAMIRVIDLARRAAQSNIPIVLEGESGVGKE
MVARAIQAASDRAAKPFVTVNCGAIPHNLVESILFGHEKGAFTGASEKHSGKFVDADGGT
LFLDEIGDLPLDVQVKLLRAVQQGEIETIGARQPQKVNVRLISATNKDLITEVREGRFRE
DLYYRLNVFPITIPALRRRKEDIPVLVRAFVERFSAEQRLDQRLTVSSGAMALLTSYDWP
GNIRQLENAIFRAVVLADGHELTVRDFPQVATQIPGYIVADRSGLSWGEAGPERRPASGQ
LAAAQADAGAREQPAHSEQTPEGRLENAIASLSEGGEVRKLAEVEEELIRFALKFYRGQM
SQVARKLGIGRSTLYRKLKDYGIDPDNPLREAA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcccatattcttgtcatcgacgacgatccggtgcagcggcggctgctgacgaac
atgatcgagcggctgggccatgtcgcgcatctcgccgacaacgggcgcagcgggctcgaa
ctcctgcagcgcaaaggcggcatcatcaacgtcatcctgctcgatcttctgatgccggaa
atgaacgggcacggccttctcgaggcgctcgccgagcgtggcattgacatcccggtcatc
gtccagacagggcagggcggcatcgagacggtggtccaggcgatgcaggccggcgccttc
gatttcctcgtcaagccggtttcgccggagcggctgtcgatcgccttgggcaacgcgctg
aagatggcgagtcgtgacggcaaggtcaaaaccgcgcggcgtccgcgtggcggggccgtc
ggtttcgacgatatcgtctcggcgagcccggcgatgatccgcgtcatcgatctcgcgcgc
cgcgctgctcagtcgaacataccgatcgtgctcgagggcgagtcgggcgtcggcaaggaa
atggtggcccgcgccatccaggcggcgagcgaccgggcggcgaagcctttcgtcaccgtc
aattgcggcgcgatcccccacaatctcgtcgagagcattctcttcggccatgagaaggga
gcgtttacgggcgcgagcgaaaagcacagcggcaagttcgtcgatgccgacggcggcacc
ctctttctcgacgaaatcggcgatcttccgctcgacgtacaggtcaagctgctgcgcgcc
gtccagcagggcgagatcgagacgatcggggcgcgtcagccgcagaaggtgaatgtgcgc
ctcatctcggccacaaataaggaccttatcaccgaggttcgcgagggccggttccgcgaa
gatctctactatcggctgaacgtcttcccgatcaccattccggcgctgcgccggcgcaag
gaggatatccccgttctggtacgcgccttcgtcgagcgcttctccgccgagcagagactc
gatcagcggctgacggtatcgagcggtgccatggcgctgctgacgtcctatgactggccg
ggcaatatccgccagctcgaaaacgcgatcttccgcgccgtcgtgcttgctgacggccac
gaactcacggtcagggattttccgcaggtcgccacccagataccgggctacatcgttgcc
gaccgctccggtctctcctggggggaagccggcccggaacgtcgtcccgcctccggtcag
ctcgccgccgcccaggccgatgccggcgcgcgggaacaaccggcgcattccgagcagacc
ccggaaggccgtctggagaacgccatcgccagcctcagcgagggcggcgaggtcaggaag
ctcgccgaggtcgaggaggaactgattcggtttgccctgaaattctaccgcggccagatg
agccaagtggcgcgcaaattgggaatcgggcgctcgactctctatcgcaaactcaaggat
tacggcatcgatcccgacaatcccctgcgtgaagcggcataa
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