Sinorhizobium kummerowiae: PZL22_003375
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Entry
PZL22_003375 CDS
T09063
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00020
Citrate cycle (TCA cycle)
skm00785
Lipoic acid metabolism
skm01100
Metabolic pathways
skm01110
Biosynthesis of secondary metabolites
skm01120
Microbial metabolism in diverse environments
skm01200
Carbon metabolism
skm01210
2-Oxocarboxylic acid metabolism
Module
skm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PZL22_003375
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PZL22_003375
Enzymes [BR:
skm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PZL22_003375
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WHS92318
LinkDB
All DBs
Position
complement(2043844..2046840)
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AA seq
998 aa
AA seq
DB search
MTRQEANEQFQLTSFLDGANAAYIEQLHARYEADPSSVSAEWQSFFKALADRPEDVVRAA
KGASWKKQNWPIPANGELVSALDGDWGTVEKVIEKKVKAKAEEAAAVAGVALSEAEVHQS
TRDSVRAIMMIRAYRMRGHLHAKLDPLGLADPVEDYDELSPKTYGFEEKDYDRKIFIDNV
LGLEYATVREMVEILERTYCSTIGVEFMHMSNPEEKGWIQERIEGPDKGVEFTPEGKKAI
LQKLIEAEGFEQFIDVKYKGTKRFGVDGGESLIPALEQIIKRGGQLGLKEIVLGMAHRGR
LNVLSQVMAKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERVKVMPLILHGDAAFAGQGVVAEILG
LSGLRGHRVGGTVHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEFRMKFHKPVVIDMFCYRRFGHNEGDEPAFTQPKMYKAIRAHKTVVQLYSDRLI
AEGLISEGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGAWSGLRTADNQDEQRRGRT
SVPMKQLKEVGRKLSEIPAGFSAHRTIQRFMENRANMIQTGEGIDWAMAEALAFGTLVTE
GTKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERFLQLCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLILMTPKSLLRHKRA
VSSLSEMAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVMCSGKVYYDLLEEREKRGI
DDIYLLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggcaagaggccaacgagcaattccagctcacatcctttctggacggcgccaat
gccgcctatatcgagcagctccatgcgcgctacgaagcggacccctcatccgtttcggcc
gagtggcagtccttcttcaaggcgcttgccgaccggcccgaagatgtggtgagggcggcc
aagggcgcctcctggaagaagcagaactggccgattcccgccaatggcgaactcgtctcg
gccctcgacggcgactggggcacggtcgaaaaggtcatcgaaaagaaggtgaaggcgaag
gcagaggaagccgcagccgttgccggcgtggcgctcagcgaggccgaggtgcatcagtcg
acgcgcgattccgtccgcgccatcatgatgatccgcgcctatcgcatgcgcggccacctg
cacgccaagctcgacccgctcggccttgccgatccggtcgaggattacgacgaactctcc
ccgaagacctacggcttcgaagagaaggactacgaccgcaagatcttcatagacaacgtg
ctcggcctcgaatatgcgaccgtgcgcgagatggtcgagatcctcgaacggacctattgt
tcgacgatcggcgtcgaattcatgcacatgtccaacccggaagagaagggctggatacag
gaacgcatcgaaggtccggacaagggcgtcgaattcacccccgagggcaagaaggcgatc
ctgcagaagctcatcgaggcggaaggcttcgagcagttcatcgacgtcaagtacaagggc
accaagcgcttcggcgtcgacggcggcgaatcgctgatcccggcgctcgagcagatcatc
aagcgcggcggccagctcggcctcaaggagatcgtgctgggcatggcgcatcgcggccgc
ctcaacgttctctcgcaggtgatggccaagccgcaccgcgccatcttccacgagttcaag
ggcggctcctacacgcccgatgacgtggaaggctccggcgacgtcaagtatcacctgggc
gcttcctcggaccgcgagttcgacggcaacaaggtccacctgtcgctgacggcgaacccg
tcgcatctcgagatcgtcaatccggtcgtcatgggcaaggcgcgcgccaagcaggaccag
atggcgaccgtattcgaaggcgacatcattccgctgcgcgaacgcgtcaaggtcatgccg
ttgatcctgcacggcgacgcggcatttgccggccagggcgtggtcgccgaaattctcggc
ctctccggcctgcgcgggcatcgtgtcggcggcacggtgcacttcatcatcaacaaccag
atcggtttcaccacgaacccggccttctcgcgttcctcgccctatccgtcggacgtggcg
aagatgatcgaggcgccgatcttccacgtgaacggtgacgatccggaagcggtcgtctat
gcggccaaggtcgcgaccgaattccggatgaagttccacaagccggtggtcatcgacatg
ttctgctaccgccgcttcggtcacaacgagggcgacgagccggcgttcacgcagccgaag
atgtacaaggcgatccgtgcgcacaagaccgtcgtccagctctattcggaccggctgatc
gccgagggcctgatcagcgaaggcgaagtcgagaagatgaaggccgattggcgcgcccat
ctcgaacaggaattcgaggcgggccagtcctacaagccaaacaaggccgactggctcgac
ggcgcctggtcgggcctgcgcacggccgacaaccaggatgagcagcgccgcgggcggacc
tcggtgccgatgaagcagttgaaggaggtcggccgcaagttgtccgaaattccggccggc
ttcagcgcgcaccgcaccatccagcgcttcatggaaaaccgcgccaatatgatccagacc
ggcgagggcatcgactgggcgatggcggaagcgctcgccttcggtacgctcgtcaccgag
ggcaccaagatccgcctctccggtcaggattgcgagcgcggcaccttctcgcagcgccat
tcggttctctacgatcaggagaccgaagagcgatacattccgctcgccaacctgtcgccg
acccaggcacgctacgaggtcatcaattcgatgctctcggaagaggcggtgctcggcttc
gaatacggctattcgctcgcccgcccgaacgccctgacgctctgggaagcccagttcggc
gacttcgccaacggcgcgcaggtggtcttcgaccagttcatctcgtcgggcgagcgcaag
tggctgcgcatgtcgggcctcgtctgcctgctgccgcacggctacgagggccaggggccg
gagcattcctccgcccggctggaacgcttcctgcagctttgcgcggaagacaacatgcag
gtcgccaacgtcacgaccccggcgaactatttccacatcctgcgccgtcaggtgaagcgc
gatttccgcaagccgctgatcctgatgacgccgaagtcgctgctgcgtcacaagcgggcg
gtctccagcctgtcggaaatggccggcgagagctccttccaccgtctcctctgggacgat
gcagaggttatcaaggacggtccgatcaagctgcagaaggattcgaagatccgtcgcgtc
gtcatgtgctcgggcaaggtctattacgaccttctggaggagcgcgagaagcgcggcatc
gacgacatctacctgctgcgcgtcgaacagctctatccgttcccggccaaggcgctcatc
aacgagctcagccgcttccgcaacgcggagatggtctggtgccaggaagagccgaagaac
atgggcgcctggtcgttcatcgatccctatctggaatgggtccttgcccatatcgatgcc
aagtaccagcgggtgcgctataccggccgtccggccgccgcttccccggcgacgggcctg
atgtccaagcatctggcacagcttgccgccttcctcgaggatgcgctggggggctga
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