Sinorhizobium kummerowiae: PZL22_004040
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Entry
PZL22_004040 CDS
T09063
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00300
Lysine biosynthesis
skm01100
Metabolic pathways
skm01120
Microbial metabolism in diverse environments
skm01230
Biosynthesis of amino acids
Module
skm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PZL22_004040 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
skm01002
]
PZL22_004040 (dapE)
Enzymes [BR:
skm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PZL22_004040 (dapE)
Peptidases and inhibitors [BR:
skm01002
]
Metallo peptidases
Family M20
PZL22_004040 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WHS92947
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Position
complement(2760647..2761840)
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AA seq
397 aa
AA seq
DB search
MFPTDPVSNLAALIRCPSVTPAEGGALAALEAMLAPVGFKVDRVVAKEPGTPDIENLYAR
IGGEGPHLMFAGHTDVVPVGDEAAWSRPPFSAAIAEGEMYGRGAVDMKGGIACFVAAVAR
HVEKHGAPKGSISFLITGDEEGPAINGTVKLLEWAAARGERWDACLVGEPTNPDCIGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPVRSILQLAQALMDPPFDDGTENFQPSNLEV
TTIDVGNTAVNVIPAKASAAFNIRFNDRWTAESLMAEIVARLDRAAAGSALRPGRAPARY
EIVWNERPSHVFLTRNNALIDSLSGAVEAVTGRQPQLSTTGGTSDARFIKDYCPVVEFGL
VGKTMHMVDERVALADLEILTGIYETFIARWFGHAAA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaccgatcccgtctccaatctcgctgccctcattcgctgcccctccgtcaca
cccgccgagggaggtgcgcttgcggctcttgaagccatgcttgctccggtcggcttcaag
gtcgaccgggtcgtggcgaaggaacccggaacgcccgatatcgagaacctttacgcccgg
atcgggggcgaaggaccgcatctgatgttcgccggccacaccgatgtggtgccggtcggc
gacgaggccgcctggagccgaccgcccttctccgccgcgatcgccgaaggcgaaatgtac
ggacgcggcgccgtcgacatgaagggcggcatcgcctgtttcgtggcggcggtcgcccgt
cacgtcgagaagcatggcgcgcccaagggctcgatctccttcctcatcaccggcgacgag
gaaggcccggcgatcaacggcacggtgaagctcctcgaatgggcggcggcaaggggcgag
cgctgggacgcctgtctcgtcggcgagccgaccaatccggactgcatcggcgacatgatc
aagatcggccggcgcgggtcgctctccggccggatcaccgttcatggcgtccagggccac
gccgcctatccgcatcttgcggacaatccggtgcgcagcatcctgcagctcgcacaggcc
ctgatggacccgcccttcgacgacggcaccgaaaatttccagccttcgaacctcgaagtc
acgacgatcgatgtcggcaataccgcagtaaacgtcattcccgccaaggcgagcgccgcc
ttcaacatccgtttcaacgaccgctggacggccgaaagcctgatggcggagatcgtcgcg
cgtctcgaccgcgcagcagccggtagcgcgctgaggcccggccgggctccggccagatac
gagatcgtctggaacgagcgtccgagccacgtcttcctgacgcgcaacaacgcgctcatc
gattcgctttcgggtgccgtggaggccgtcaccgggcggcagccgcagctgtcgaccacc
ggcggtacatcggacgcgcgcttcatcaaggactattgcccggtcgtcgaattcggcctc
gtcggcaagaccatgcacatggtcgacgaacgcgtcgcccttgccgatctcgaaatcctg
accgggatatacgaaaccttcatcgcccgctggttcggtcatgccgctgcttga
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