Saccoglossus kowalevskii (acorn worm): 100370615
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Entry
100370615 CDS
T04123
Symbol
A1CF
Name
(RefSeq) APOBEC1 complementation factor
KO
K24978
APOBEC1 complementation factor
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100370615 (A1CF)
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
APOBEC1-ACF complex
100370615 (A1CF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DND1_DSRM
RRM_7
AceK_regulatory
Motif
Other DBs
NCBI-GeneID:
100370615
NCBI-ProteinID:
XP_006818848
LinkDB
All DBs
Position
Un
AA seq
627 aa
AA seq
DB search
MTAEDSVVVPNSQASNMETISGKTQPPEGIAGARNETALLSLMERTGYNIIQENGQRKYG
GPPPNWEGITPGRGCEIFVGKIPRDLFEDELVPVFMSVGLIYEMRLMMDFSGNNRGYAFV
MYTNKEDAKKAIKQLNNYEIRKGRYLGVCASVDNCRLFVGGIPKNKKRDEILHEMQKVTE
GVVDVIVYPSATDKTKNRGFAFVEYENHRAAAMARRKLIPGRIQLWGHQIAVDWAEPEQE
VDEDIMKTVKVLYVRNLMLNTTEETIEKEFNSLKEGSVERVKKIRDYAFVHFVTREDALY
ALNAMNGHNVDGSVVEVVLAKPVDRENYVRYTRGGARGTFSQGYVAPFGYDPNYGPPQTA
NYYGQFPQATNTRYQEFENHPSARGGMIRGRGRSAAGSRGAGGRGYLAYNMGRGYGRGFY
DKKNPVEPRLYDIVPGMELTPTNPLTLKPSAIKSATQYLEEICNKNNWGNPVYTLHSTRG
HENVQLFLYKVSVPALANHFPNSFQPNKLCPSVDEAKSYAAEYVLIQLGVPLDGSAGEVP
VTMTTTPSNFQDRPIGPTGYAMANGGARATEATPYPAYVPITSAPSIMAQGKMLQGGLSQ
DNQTPTASPYYNQASYPPTPEMYQQYS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgaagatagcgtagttgtgccaaacagccaggcaagcaacatggagaccatc
agcgggaaaacacagcctccagaagggattgccggagcaagaaacgagacggctttattg
tctttgatggaacgaacggggtacaacattatccaagaaaatggacagcgaaaatatgga
ggccctcccccgaactgggaagggattaccccgggtcgtggctgtgaaatatttgtgggc
aagataccacgagatttgtttgaggacgaactggttccagtattcatgtccgtaggtctg
atctatgaaatgcgtctaatgatggatttcagcggaaacaatcggggatatgccttcgtc
atgtatacgaacaaggaagacgccaaaaaggctataaaacaactgaacaattacgaaatt
cgcaagggacgatacttgggcgtctgtgctagtgttgacaattgtcgcttgttcgttgga
ggcataccaaaaaacaagaaaagggacgaaatcctacacgaaatgcaaaaagttacggaa
ggagttgtcgatgtaatcgtgtatccaagtgcaacagacaaaactaagaaccgtggtttc
gccttcgttgaatatgaaaatcatagagctgctgcgatggcacgaagaaaactcatccca
ggaagaatacagctgtggggtcatcagattgccgtcgactgggccgaaccagagcaagaa
gttgacgaggatataatgaaaacggttaaagttctatacgttcgtaatctaatgcttaac
acgacagaagagacaatcgagaaagaattcaacagtttaaaggaaggttcagtagagaga
gtaaaaaagatccgagactacgcatttgttcattttgtcacaagagaagatgctctctat
gctctcaatgctatgaatggtcacaatgttgatggttctgttgttgaagtggttcttgcc
aagccagtggatcgggagaactatgtccgttataccagaggcggcgcaagaggcacattc
tctcagggctacgttgcaccgtttggttacgatccaaactatggcccaccgcagacagct
aattactatggccagtttccacaagcaacgaataccagataccaagaatttgaaaatcac
cctagtgctagaggtggtatgatacgaggacgcggtcgaagcgctgcgggctcaagagga
gctggaggtcgtggttacttggcgtataacatgggaagaggatatggacgaggattctat
gacaagaaaaacccagttgagccccgactctatgatatagtgcctggcatggaactgaca
ccaactaacccactgactttaaaaccgtcggccatcaaatctgcaacccagtatttggag
gagatctgtaacaagaacaactggggaaacccggtatacactctgcactccaccaggggg
catgagaatgttcagcttttcctgtacaaggtttcggtaccagctttagccaatcatttc
ccaaacagcttccaaccaaataaactatgtccaagtgtggatgaagccaaaagctatgca
gctgagtatgttcttattcaactgggagtaccactagatggttctgctggtgaggtacca
gttaccatgaccactacgccatcaaacttccaggatcgccccatcggaccaactgggtat
gctatggctaatggtggtgcccgtgccaccgaagccacaccgtacccagcctatgttccg
atcaccagcgcaccatctataatggcccaagggaaaatgctgcaaggtggtcttagtcaa
gacaaccagacacccacagcatcgccttactacaatcaagcaagctatcctcctacccct
gagatgtatcaacaatattcatga
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