Saccoglossus kowalevskii (acorn worm): 100371111
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Entry
100371111 CDS
T04123
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100371111
03041 Spliceosome [BR:
sko03041
]
100371111
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100371111
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100371111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
Nup35_RRM
Nup35_RRM_2
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
100371111
NCBI-ProteinID:
XP_002735593
LinkDB
All DBs
Position
Un
AA seq
409 aa
AA seq
DB search
MMANQYFDDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEF
VEHSHAAAALQTMNGRMILGKEVKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKA
AFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATR
KPPPPRQPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIF
PDKGYAFIRFMTHESAAHAIVSVNGSQINGHMVKCSWGKESSDPLYQAQPNTYPGYYNYQ
QGQWNQYYQQYATQQPQVQPQQYMGGAAAVPQQSSYYYPQYQGPNVMVGYNMPAGYGAQA
GQPTLTQQSYAAGQQQPTMNQVLPSNPGGLLPTPASQPSYMQPQGYQAQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatggctaaccagtattttgacgatgacgctcttccccgaactctgtacgttggaaac
ttggaccggcaggtgacagaagccttcatactacaactattcggtcagatagggccgtgc
aagagttgtaaaatgatagcagagcacggtggtaacgatccgtattgcttcgtggagttt
gtagaacacagtcacgctgcagcggcattgcaaactatgaacggaaggatgattttgggc
aaggaagtcaaagtaaattgggccacaacaccaagtagtatgaagaaggacacaagtaat
catcaccatgtgtttgtgggggacttgtctagtgaagttgacacgccagatttgaaagca
gcatttgcaccatttggacaaatctcagacgctcgtgtagttaaggacttacaaacaaac
aaatctaaaggatatggctttgtttcttttctcaataaagtggatgcagagaatgccata
cagggaatgaatggacagtggttgagtgggagagcaattcgtactaattgggccacacgt
aaacctccaccgcctcggcagccagaaaccaccaaacaactatcctatgacgacgtgtgc
aactcttctagctataccaacacaacagtttatattgggggtgtgacaacaggactgacg
gagggaaaaatgagggaaactttttctcactatggacatatacaagaagttaggatattc
ccagataaaggatatgcttttattcgattcatgactcatgagagtgcagcacatgcaatc
gtctcagtgaatggatctcagataaacggacacatggtcaaatgttcctggggtaaagag
tcctctgatcctttgtaccaagcacagccaaatacctatcctggctattacaattaccaa
cagggacaatggaatcaatactaccaacagtatgctacccagcagccccaggtgcagcca
cagcaatatatgggaggagcggctgctgtgccacaacaaagcagctattactacccacaa
tatcaaggaccgaatgtaatggttggatacaacatgccagctggttatggtgcacaggct
gggcagcctacattaacacaacaaagttatgcagctggtcagcaacagccgacaatgaat
caagtcctgccgagcaaccctggcggccttctgcccactcctgcatctcaaccaagctac
atgcagccacaagggtaccaggcccagtaa
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