Saccoglossus kowalevskii (acorn worm): 100375764
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Entry
100375764 CDS
T04123
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100375764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100375764
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100375764
U7-dependent histone pre-mRNA processing factors
100375764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
100375764
NCBI-ProteinID:
XP_006816057
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MSAVGQSAATDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF
CEYKDQETALSAMRNLSGYELNGRQLRVDNAASEKNKEELKILQASGPPVESPFGEPCSP
DEAPTAISKAVASLPPEQMYELMKQMKMVIQNNPVEARNMLLQNPQLAYALLQAQVVMRI
VSPEIAMAMLHKPQTQAPPLETGGPGPAPGQPIMQNPNMVGPGSNQGMPVNSSAPMQPQG
PQPLMAIPQPAPQQQPQGPMNSGGAMLSGQLLGPDPRMSMTGSQGQPMVGGQGQPMVGGQ
GQPMVGGQGQPMGGGQGPSMPGPPMGMQQQQQPRQPPPAQLRGGLLGDTPLDPRPQQDPR
GRPDPRQVDPRGGPGPRGPGGPPQRGPVPGGPRMSQAPPGLNIPGFSPSGGGSPSQNITA
QDQEKAALIMQVLQLTPEQVAMLPPDQRQSIMILKEQIARSTGHP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgttggacaaagtgctgccactgatcgatctttaagatcggttttcgttggt
aacattccttatgaagcaacagaagaacaattaaaagatatcttctcagaagttggtccc
gttgtcagttttagattggtatatgacagagagactggtaaacctaaaggatatggattc
tgtgaatataaagaccaagaaacagcactcagtgctatgagaaatctgagtggttatgaa
ttgaatggacgacagcttcgggttgataatgctgccagtgaaaaaaataaggaggaatta
aaaattctacaggcatctggtccaccagtggagtctccgtttggtgaaccatgttcccca
gatgaagctcctactgccattagcaaagcagttgcaagtctaccaccagaacaaatgtat
gaacttatgaaacagatgaagatggtgattcagaataatcctgttgaagctcgtaatatg
ttactacaaaatccgcagttagcatatgctttattgcaagcacaggttgtgatgagaatt
gttagtcctgaaattgctatggctatgttacataaacctcaaactcaggcaccacctctc
gaaacaggtgggcctggcccagcccctggtcaacctatcatgcaaaatcctaacatggta
ggtccgggatctaaccaaggaatgcctgtgaattctagtgcacctatgcagccacaagga
ccacaaccactgatggccatacctcaacctgctccacagcaacaaccacaagggcctatg
aattcaggtggtgccatgctttcaggccagttattaggtccagatccaagaatgagtatg
actggcagtcagggccaacctatggtagggggtcaagggcaacctatggttgggggtcaa
ggtcaacctatggttgggggtcaaggtcaacctatgggtggaggtcagggtccatctatg
cctggaccacccatggggatgcagcaacaacaacaaccacgacaaccaccacctgcacag
cttagaggaggtttattaggcgatacaccattagatccacgaccccaacaagatccaaga
ggtcgtcctgatccgagacaagtggatccacgaggtggtcccggccctagaggacctggt
ggacccccacaaagaggacctgtacctgggggtcctcgcatgtcacaagcgccaccagga
ttaaacataccaggtttcagtcccagtggtggaggctccccatcccaaaatattacagca
caagaccaagaaaaagctgctctaattatgcaagttttacagttaacaccagagcaggtt
gccatgttacctccagaccaaagacagagtattatgattttaaaagaacaaatagccaga
agtacaggacacccttaa
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