Sphingomonas koreensis: BRX40_03900
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Entry
BRX40_03900 CDS
T04828
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03030
DNA replication
skr03410
Base excision repair
skr03420
Nucleotide excision repair
skr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRX40_03900
03410 Base excision repair
BRX40_03900
03420 Nucleotide excision repair
BRX40_03900
03440 Homologous recombination
BRX40_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skr03032
]
BRX40_03900
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_03900
Enzymes [BR:
skr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRX40_03900
DNA replication proteins [BR:
skr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BRX40_03900
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BRX40_03900
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRX40_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DprA_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APR51693
UniProt:
A0A1L6J6W5
LinkDB
All DBs
Position
complement(779164..781929)
Genome browser
AA seq
921 aa
AA seq
DB search
MPHLYLVDGSGYIFRAYHRLPPLTNKHGEPVGAVYGYTTMLWKLADELHKADGPTHMAVI
LDKSEHTFRNEMYDQYKAHRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGWEADDLIASY
TKAALAQGWQVTIVSSDKDLMQLMTDPSVDMLDTMNNRRLGPKDTEEKFGVLPEKLGEVL
ALMGDSVDNVPGVKGIGPKTAAKLIQEFGTVDAVLEAAPSMKPSKMRDNLIEYADMARLS
RKLVELASDVPLPDPLDELELKGIPDAPLRAFLEHHGFKTLLSRLGGGASVADAPVASPE
PVPMPDDPPCDHDGYETVVDEAALERWILAAKHQGWVAIDTETTGVDATRAELVGVSMAL
EPNRACYIPVGHGGTDMFAEKPVQLDRNLVIAKLKPLLEDPSVLKIGHNIKYDLIVLSRA
GIDVAPYDDTIVMSFDLDAGLHGHGMDELAATHLSHTCIAYKDVVGSGKKQLGFQEVDLK
AATRYAAEDADVTLRLWRRLKPRLPFEGSTRVYEMVDRPLARVIADMELAGVKVDAGVLA
KLSDDFSRQIAALEEEIHGIAGFKFTIGSPKQLGDVLFDKMGIKGGRKGKSGVYSTDVNE
LERIAADKDSPGREMVLKVLDWRQLTKLKSTYTDALQAQINPATGRVHTSYSLTGAQTGR
LSSTDPNLQNIPVRTEVGRQIRDAFVAEPGNVILSADYSQIELRLAAHIADVPQLREAFE
RGDDIHNMTATELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVTPDEAQAMIDRYF
ERFPGISRYIADTLNDAKARGYTQTLFGRKTHFPRLKSATQHERAGSERAAINAPIQGTS
ADIIKRAMARMGPALRDAGLENVRMLMQVHDELVFELPAGDVEAATPVIRGVMESAAEPA
VTLSVPLGVEIGTGPSWGAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccccatctctatctggtcgacggctccggctatatcttccgcgcctatcaccggctg
cccccgctgaccaacaaacatggcgagcccgtgggggccgtctatggctacaccaccatg
ctgtggaagctcgccgacgagctgcacaaggccgatggccccacgcacatggcggtgatc
ctcgacaagagcgagcacaccttccgcaacgagatgtacgatcagtacaaggcgcaccgt
cccccggcgcccgaggacctcgtcccccagttcccgatgatccgcgacgcgacacgcgcc
ttcagtttgccgtgcatcgaggaagccggatgggaagccgacgatctgatcgcgtcctac
accaaagccgcgctggcgcagggctggcaggtcaccatcgtcagctccgacaaggatctg
atgcagctgatgaccgacccgtcggtcgatatgctcgacacgatgaacaaccgccgcctg
gggccgaaggataccgaagagaaattcggtgtcctccccgaaaagctcggtgaggttctg
gcgctgatgggcgacagcgtcgacaacgtgcccggcgtcaagggcatcggccccaagacc
gctgccaagctgatccaggagttcggcacggtcgatgcagtgctggaggcggcaccatcg
atgaagccgtccaagatgcgcgacaatctgatcgaatatgccgatatggcgcgcctcagc
cgcaagctggtcgagcttgccagcgacgtgcctctccccgacccgctggacgagctcgag
ctcaagggcattcccgacgcgccgctgcgcgcctttctcgagcatcatgggttcaaaacc
ttgctctcgcgcctaggtggcggcgcaagcgttgccgatgcgccagtcgccagtccggag
ccggtgccaatgcccgacgacccgccctgcgaccacgacggatatgagacggtggtggac
gaagcggcgctcgaacgctggattctcgccgcgaagcatcagggctgggttgcgatcgac
actgagacaaccggggtcgatgccacccgcgccgagctggtcggagtcagcatggcgctc
gaacccaaccgcgcctgctacatcccggtcggccatggcggcacagatatgttcgccgaa
aagccggttcagctcgaccgcaacctggtgatcgccaagctgaaaccgctgctcgaggac
ccgtcggtcctcaagatcggtcacaacatcaaatacgatctgatcgtgctgtcgcgtgcc
ggcatcgacgttgctccttatgacgacacgatcgtgatgagcttcgacctcgatgccgga
ctccacggccacgggatggatgagctggcagcgacgcacctctcccacacctgtatcgcc
tacaaggacgtggtcgggtccggaaagaagcagctcggcttccaggaagtcgatctcaag
gccgcaacccgttacgccgccgaggatgccgacgtcacgctgcggctgtggcggcgcctc
aagccacgcctgccgttcgagggatcgacccgggtctatgagatggtggaccgcccgctc
gcgcgcgtcatcgccgacatggaactggccggggtcaaggtcgatgctggggtgctggcg
aagctttccgacgacttttcccgccagattgccgcactggaagaagaaatccacggcatc
gccgggttcaaattcaccatcggcagccccaagcagctcggcgatgtcctcttcgacaag
atggggatcaagggcgggcgcaagggcaagtcgggcgtctattcgaccgacgtcaacgag
ctggagcggatcgccgcggacaaggattcgccagggcgggagatggtgctgaaggtgctc
gactggcgccagctgaccaagctcaaatcgacttataccgacgcgcttcaggcgcagatc
aacccggcgaccggccgcgtccacaccagctattcgttgaccggcgcgcagaccggccgc
ctgtcatcgaccgaccccaacctccagaacatcccggtgcggaccgaggtcgggcgccag
atccgcgacgccttcgtcgccgagccgggcaacgtcatcctcagcgccgactattcgcag
atcgagttgcggctggcggcacacatcgccgacgtgccccagctgcgcgaggcgttcgaa
cgcggcgacgacatccacaacatgaccgcgaccgagctgttcggcgaggtcaaccgcgac
acccgcggccgcgccaagacgatcaacttcgcgatcctctacggcatcagccgttggggt
ctcgccggccggctcgacgtcaccccggacgaggcgcaggcgatgatcgaccgctatttc
gagcggttccccggcatcagccgctacatcgccgacacgctgaacgatgcgaaggcgcgc
ggctatacgcagacgctgttcggccggaagacgcacttcccgcgcctcaaatcggccacc
cagcacgagcgtgcaggcagcgaacgcgctgcgatcaacgcgccgatccagggcaccagc
gcggacatcatcaagcgcgcgatggcgcggatgggcccggcgctgcgggatgccggactg
gagaacgtcaggatgctgatgcaggtccatgacgaactggtcttcgaactgcccgcaggc
gatgtcgaagcggcaacaccggtcatccgcggggtgatggagagcgcggcggaacccgcc
gtcacgctcagtgtgccgctgggggtcgagatcggcacaggcccaagctggggcgcggcg
cattga
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