Salinivibrio kushneri: FCN78_08550
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Entry
FCN78_08550 CDS
T05956
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sks
Salinivibrio kushneri
Pathway
sks00521
Streptomycin biosynthesis
sks00523
Polyketide sugar unit biosynthesis
sks00525
Acarbose and validamycin biosynthesis
sks00541
O-Antigen nucleotide sugar biosynthesis
sks01100
Metabolic pathways
sks01110
Biosynthesis of secondary metabolites
sks01250
Biosynthesis of nucleotide sugars
Module
sks_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FCN78_08550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FCN78_08550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FCN78_08550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FCN78_08550 (rfbB)
00525 Acarbose and validamycin biosynthesis
FCN78_08550 (rfbB)
Enzymes [BR:
sks01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FCN78_08550 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QCP02435
LinkDB
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Position
1:complement(1824958..1826028)
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AA seq
356 aa
AA seq
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MKILVTGGAGFIGSAVIRHIIDHTTNSVVNVDKLTYAGNLESLTGWEDNPRYAFEQVDIC
DREALERVFTTHQPDAVMHLAAESHVDRSIDGPAAFVETNIIGTYTLLEVCRQYWNGLDD
KRQAAFRFHHISTDEVYGDLHGTDELFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP
TIVTNCSNNYGPYHFPEKLIPLMILNALEGKSLPVYGNGLQVRDWLFVDDHARALYQVVT
KGAVGETYNIGGHNEKQNIEVVKTICAIMDELVPMHKRGYLEGTQHASLITYVQDRPGHD
VRYAIDAGKIERELGWTPQETFESGIRKTVEWYLTNREWWQRVLDGSYTRERLGAN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttggtaacggggggcgccgggtttattggctcggcggtaattcggcatatt
atcgaccacacgacaaactcggtcgtcaatgttgataagctaacctacgccggcaatttg
gaatccctcaccggatgggaagataacccgagatatgcgtttgagcaggttgatatttgc
gatcgtgaggcgcttgaacgagtatttacaacccatcagccggacgcggtaatgcattta
gcggctgagtcacatgttgatcgttccattgatgggccggcagcatttgtggagaccaat
attatcggtacctataccttgctcgaggtgtgccgccaatattggaatgggctggatgat
aaacgtcaagcggcatttcgctttcatcatatctccaccgatgaagtgtatggcgatttg
cacggcaccgatgagctgttcactgagacgactccttatgcgccatcaagtccttattca
gcgtcgaaagcatcgagtgaccatttagtacgtgcttggcaacgtacttacggcttgcca
acaatagtgacgaactgctccaacaattatggcccgtatcattttccagaaaaactgatc
ccgcttatgattcttaatgccttggagggtaaatcgttacctgtttatggtaatggctta
caggtgcgtgattggctgtttgttgatgatcatgctcgtgcgctgtatcaagtggtgacg
aaaggcgcagtaggcgaaacctataatatcggcggccacaatgagaagcagaacatcgag
gtcgtgaaaacgatttgtgccattatggatgagcttgttcccatgcataaacggggctat
ctggaagggacacaacatgcatcgctgattacatatgttcaagatcgccctggccacgat
gttcgctatgcgattgatgctggcaaaattgaacgcgagcttggttggacgccacaagaa
acctttgaatccgggatccgcaaaacggtggaatggtatctgaccaaccgtgaatggtgg
cagagagtccttgatggctcttacacacgcgagcggctaggcgcgaactag
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