Skermanella sp. TT6: IGS68_23890
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Entry
IGS68_23890 CDS
T07020
Name
(GenBank) ribulose-bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00630
Glyoxylate and dicarboxylate metabolism
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01120
Microbial metabolism in diverse environments
skt01200
Carbon metabolism
Module
skt_M00165
Reductive pentose phosphate cycle (Calvin cycle)
skt_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IGS68_23890
Enzymes [BR:
skt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
IGS68_23890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QQP89011
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Position
5121454..5122920
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AA seq
488 aa
AA seq
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MEVVADRVITDKKARYKPGVLKYKQMGYWDPDYEVKDTDILAAFRITPQDGVDPVEAAAA
VAGESSTATWTVVWTDRLTDCENYRAKAYRVDPIPGAPDQYMAYIAYDLDLFEEGSIANL
TASIIGNVFGFKPLKGLRLEDMRIPTAYLKTFQGPATGIIAERERLNNYGRPLLGATMKP
KLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRDRYLYCMEGVNKAIAETGEIK
GTYLNVTAATMEDMYERAEFARELGSVIIMIDLVIGYTAIQSMAKWARRNDMILHLHRAG
HSTYTRQKSHGVSFRVIAKWMRMAGVDHIHAGTVVGKLEGDPSVIRGIYDTCRETHVPQR
LEHGILFDQPWASLKKMMPVASGGIHAGQMHQLLTYLGDDVVLQFGGGTIGHPGGIQAGA
VANRVALETMVKARNEGRDIWNEGPEILARAAKWCQPLRAALDTWKDVTFDYASTDSVDY
VPTPTPAF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggtcgcggatcgcgtcatcaccgacaagaaggcccgctacaagccgggtgtc
ctcaagtacaagcagatgggctactgggaccccgactacgaggtcaaggacaccgacatc
ctcgccgccttccgcatcacgccccaggacggcgtcgatccggtggaggccgccgcggcc
gtcgccggcgagtcctccaccgcgacctggaccgtggtctggaccgaccgcctgaccgac
tgcgagaactaccgcgccaaggcctaccgggtcgaccccatcccgggcgctcccgaccag
tacatggcctacatcgcctacgacctggacctgttcgaggaaggctcgatcgccaacctg
accgcctcgatcatcggcaacgtcttcggcttcaagccgctcaagggcctgcgcctcgag
gacatgcgcatcccgaccgcctacctgaagaccttccagggaccggcgaccggcatcatc
gccgagcgcgagcggctgaacaactatggccgccccctgctgggcgccaccatgaagccg
aagctgggcctgtccggccgcaactacggccgggtcgtctacgaggcgctgaagggcggc
ctggacttcaccaaggacgacgagaacatcaattcccagcccttcatgcactggcgcgac
cggtatctctactgcatggaaggcgtcaacaaggcgatcgccgagaccggcgagatcaag
ggcacctacctgaacgtcaccgccgccaccatggaggacatgtacgagcgggctgagttc
gcgcgggagctgggcagcgtcatcatcatgatcgacctggtgatcggctacaccgccatc
cagtccatggcgaagtgggcgcgcaggaacgacatgatcctgcacctgcaccgcgccggg
cattcgacctacacccggcagaagtcccacggcgtgtcgttccgggtgatcgccaagtgg
atgcgcatggccggcgtcgaccatatccacgccggaaccgtcgtcggcaagctggaaggc
gaccccagcgtgatccgcggcatctacgatacctgccgcgagacccatgtgccccagcgg
ctggagcacggcatcctgttcgaccagccctgggccagcctgaagaagatgatgccggtg
gcgtccggcggcatccatgccggacagatgcaccagcttctcacatacctgggggacgac
gtggtgctccagttcggcggcgggaccatcggtcatcccggcggcatccaggccggggcc
gtcgccaaccgcgtggcgctggagaccatggtcaaggcccgcaacgaggggcgcgacatc
tggaacgaagggccggagatcctggccagggcggccaaatggtgccagccgctgcgcgcg
gcgctggacacctggaaggacgtgacgttcgactacgcctcgaccgacagcgtcgactac
gtcccgaccccgacgcccgccttctag
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