Skermanella sp. TT6: IGS68_28020
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Entry
IGS68_28020 CDS
T07020
Name
(GenBank) IS630 family transposase
Organism
skt
Skermanella sp. TT6
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Gene cluster
GFIT
Motif
Pfam:
DDE_3
HTH_29
HTH_33
HTH_28
HTH_32
HTH_23
LZ_Tnp_IS481
rve_3
PelD_GGDEF
Motif
Other DBs
NCBI-ProteinID:
QQP93299
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Position
pTT6-1:complement(join(45249..45847,45847..46330))
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AA seq
360 aa
AA seq
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MVAVAIRRDIEASELRRLARLERDGRVSSRLLALAAVLDGVSREQAARIGGMDRQTLRDW
VHRFNEAGVSGLRDRARPGRPCLVAEELLPELAALIADGPQVERDGVVEFRLSHIRALSL
RHFGADYSQGGMHAVLRRMGFSWLKPRPIHPKTDLAAQETFKKNFGQTLACIRDQHPEVE
RVEVWFQDGAEGPHARVGQKGSLTHLWAPTGTRPRAVRDHRFKSAYIFGAVCPERDTGVA
LVVSRVSTEAMNLMLAEISQAVGKAAHAAVLIDGAGWHIANDLEVPANITLVPLPPYSPE
LNAIERLWQVMRDTLLSHRLFTDLNHIIEVCCATWNTLIGQPGRIRSTCGYPWAAPVRTS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgttgcgatccgacgagacatcgaggccagcgagttgcgacgccttgcccgt
ctggagcgggatggtcgggtatccagccggcttctggctctggcggcggtgctcgatggt
gtcagccgcgaacaggccgctcgcatcgggggaatggatcggcagaccctgcgcgactgg
gttcaccgcttcaacgaagcgggtgtttcgggcctgcgcgaccgtgcccggcctgggcgg
ccctgcctggtggccgaggaactgctcccggaactggccgccctgatcgcggacggtccg
caggtcgagcgcgacggtgtggtcgagttccggctgtcccatatccgcgcgttgtcgctg
cggcacttcggcgccgactacagccagggcggcatgcacgccgtgctgcgccggatgggc
ttttcctggctgaagccccggccgatccaccccaagaccgaccttgcggcccaggagaca
tttaaaaaaaacttcggccagacgctggcatgcatccgtgatcagcatcccgaagtcgag
cgggtggaggtctggttccaggatggggcggaggggccccatgccagggtcggccagaaa
ggctcgctgacccacctgtgggcaccgaccggcacgcggcctcgagcggtgcgcgaccat
cgcttcaaatccgcctacatcttcggcgcggtttgtccggagcgcgacaccggggtggcc
ctggtggtcagtcgggtcagcaccgaggcgatgaacctcatgctcgccgagatcagccag
gccgtcggcaaggccgcacatgccgccgtgctgatcgatggcgccggctggcacatcgct
aacgatctcgaggtgccggccaacatcactctcgtcccgctgccgccctacagcccggag
ctcaatgccatcgagcgtctgtggcaagtcatgcgcgacaccctgctttcacaccgactc
ttcaccgatctcaaccacatcatcgaagtctgctgcgcaacctggaataccctcatcggc
cagcctggacggatacggtctacatgcggttacccctgggccgcaccagtcagaacttcc
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