Seriola lalandi dorsalis (Yellowtail amberjack): 111652217
Help
Entry
111652217 CDS
T06058
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slal01002
]
111652217 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111652217 (usp4)
Enzymes [BR:
slal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111652217 (usp4)
Peptidases and inhibitors [BR:
slal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111652217 (usp4)
Ubiquitin system [BR:
slal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111652217 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
DUF1609
Motif
Other DBs
NCBI-GeneID:
111652217
NCBI-ProteinID:
XP_023258193
Ensembl:
ENSSLDG00000016064
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MMAEGGGPESGGAADSDSEPVAAQMPAPSTESQKQTIGSLLKTTLRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQDTQALKEHLIDELDYVLVPTEAWNK
LVSWYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEKEMRTLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSNSSASISSTVANGDSSCSPGYTLNNTTSSGNRLG
GYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGTVTDLCSA
LSKLSGIPPENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDSERMNLPVYF
RERHSKHAGSSTSTMLFGQPLLITVPRHNLIADVLYDMILERIGRYVKHSQSPNSESRAS
ASATFASCSQAPECSTSSSLNAGLGGCGSPLSDGASCSASSSNGSNHSGTCNETNGLYDG
EEEAMDHQVSPEPENGQSEEEEEETSDLENGSKGDAAKLCSSPAKLFTFSIVNSYGTANI
SPLPCDGNVLKLNPHSTVAIDWDTESKKLCYDEQEAEAYEKHESMLQPQKKKATVALREC
IELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRLLVVHLKRFSYNRCWRDKLDTV
VDFPIRDLNMSEFVCDPKAGPYIYDLIAVSNHYGGMGGGHYTAYGKNKVDGKWYYFDDSS
VSSASEDQIVTKAAYVLFYQRRDEEAPSKPQPSASLGGAPEAADDHMDTN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagtcgggtggcgcggcagactccgactcggagccg
gtagccgcacaaatgccagccccttcaaccgaaagtcaaaaacagacaattgggtcactt
ttgaaaacaactctacgaaagggcgacgaatggtatctaatagacagccgatggttcaaa
caatggaagaagtatgtgggatttgacagctgggacatgtacaatgttggagaacgtagc
ctctatccaggaccaattgataactccgggttgttctcagaccaggatactcaagccctg
aaagagcaccttatagatgagctggactatgtccttgtacccactgaagcatggaataag
cttgtcagctggtacggctgccttgagggtcagagacccatcgtcaggaaggtggttgaa
cacggcatgtttgtcaagcactgtaaggtggaggtctatctgctggagctgaatttgtgt
gagaatgacaacatggacaatgtggtcacacgtcatttcagtaaagctgatactatagat
actatagagaaggagatgaggacactgttcaatatcccatcagagaaggagactcggctc
tggaacaaatacatgagcaacacctacgagcaactgaacaagccagacagcactgtacag
gatgctggtctcttccaggggcaggtgcttgtgattgagcgcaagaatgaggatggcacg
tggcccagacaagcctctcatcccaaatccagtacaaccccatccaggaatttcactacc
tccccaaaactctcctctaactcatcagctagtatctcctcaacagtagcgaacggagac
agcagctgtagccctggatacacactcaacaacaccacctcatctggcaacagattgggg
ggctacaattcatacagctcctcctacaactacagagagtcacagtcgcagcctggcctg
tgtggtctcagtaatttgggcaacacatgcttcatgaactctgccctccagtgcctgagt
aatgcatctccactcacagagtacttcctcaatgaccagtatgaggcagagattaaccga
gagaatcccctgggaatgaggggtgagatagctgaggcctatgctgatctagtaaagcag
atgtggctgagccgcagcagctatgtggccccacgtaccttcaaaacccaggttggacgc
tttgccccccagttttcaggctaccagcagcaggactcacaggagctgttggccttcctc
ctggacgggctccatgaagatctgaaccgtgtcaagaagaagccttatctggccctgagg
gatgcagagggccgtccagacgagattgttgccaaggaggcttggacaaaccatcgcttg
cgcaatgactctattattgttgatattttccacggcctcttcaaatccactttggtgtgc
ccagagtgctccaaagtgtccgtcacctttgacccgttctgctacctcacactgcctctg
cccatgaagaaggaccgtaccatggaggttttcctggtgcgatctgaccctcagtctaga
cccacacagtatcgagtggtggtccccaaactgggtacagtgacagacctgtgcagcgcc
ttgtccaaactcagtggaatccctccagaaaatatggtggtggcggatgtttacaatcac
aggttccataaaatttatagacgggatgatggcctcaaccaaatcatggaaaaagatgac
atctttgtgtatgaggtacaggaggaggacagtgagaggatgaacctgcctgtatatttc
agggagcgccactccaagcatgctggaagctccacaagcaccatgctgtttggccagcct
ttactcatcaccgtgcccagacacaacctcatagcagacgttctatatgacatgatccta
gagaggattgggcgctatgtaaaacactctcagagccccaacagtgaaagtagggcctca
gcctcagccacctttgccagctgcagccaggctcctgaatgttccacatcgtctagtctc
aatgccggcctgggtggctgtggcagccccctgtcggacggagcctcctgcagtgccagc
tccagtaacggcagcaaccactcagggacctgcaatgaaactaatgggctatatgatggt
gaagaggaggccatggaccaccaggtgagtccagagccggagaatggccagtctgaagag
gaggaagaggagacctctgacttggaaaacggctctaaaggagacgcagccaagctgtgc
tcttcaccagccaagctcttcactttcagcatagtcaactcttacggaacagccaacatt
agcccgctgccttgtgatggaaatgtcctcaaacttaatccacattccacggtggcaatc
gactgggacacagagtcaaagaaactgtgttacgatgaacaggaagcagaggcctacgag
aagcatgagagcatgctccagccccaaaaaaagaaagccaccgtggctctgagggaatgc
atcgagctctttacaaccatggagacacttggagaacacgatccttggtattgtcccacg
tgtaagaaacaccaacaggccacaaaaaagtttgacttgtggtcgctgcctcgccttctg
gtagttcacttgaagcgtttctcctacaaccggtgttggagggacaagctggacacagtg
gtggacttccccatcagggatctgaacatgtctgagtttgtgtgtgaccctaaggccggc
ccttacatatatgacctcattgctgtgtcaaaccactatggaggaatgggagggggtcac
tacacagcttatggcaagaataaagtggatggaaagtggtattacttcgatgacagtagt
gtctcttcggcctcagaggaccagattgtgactaaagcagcctacgtgctgttctatcag
cgcagagatgaggaagccccctccaaacctcagccttcggcctcgctgggtggagcccct
gaagcggctgacgaccacatggacacaaactga
DBGET
integrated database retrieval system
