Seriola lalandi dorsalis (Yellowtail amberjack): 111653432
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Entry
111653432 CDS
T06058
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111653432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111653432
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111653432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
111653432
NCBI-ProteinID:
XP_023259811
LinkDB
All DBs
Position
Unknown
AA seq
2372 aa
AA seq
DB search
MAAVLLQVLERAELNKLPKGAQNKLEKFVTELQGANEALRTQHERFKADSEQQYFDIEKR
LVESQEQILSATRDLQTLKAENKKLNEELNTLKGIEGETFEDKTPQQQTKAKYEIEAEKR
ELARLLEKRTQEVENLTVDVNRLKEKLTETNKLKMELQLKLDDIQSSEASVQHREKRMEQ
EKELLEKKIEWLTAELKTKTDELLNNNRDKGKEILELQGSLKSSKEQATRLESQLTSLKQ
TSESQSKRAEDLNNKLKQAKDERSAMEEKYRNELNAHVKLSSLYKGAATDMETKNQELSR
AVEELSKLVKDSGEANNVLEKKVSEGEQLKMRLEAELSEKIKKMEKELENATTKAAGKHC
CGPSLTEEQLDFMCPSAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETKRVSRVLDE
IVQEVESKAPVLKRQREEYEGMQRSMASLCNKLEQARMEIYSLQKEKEEAKQRCDAVERE
KLRAERQLEDTSTQVCSLLVELEEARGNQVTKDDDGSADISSTSEVISQRQLSFRSVEEL
QRQNQSLLGRLRELEQEKDRQQSRVTSERISELEASVDKLQKEVEQLREQRNQQKQLADS
SARQRDMYKALLTHSTGFILPPPGLEASSQPAHVRPSVPATRSTPQRAAAAESAQTAQAK
AALKQLNDAFTLYKKEKAENDRMLNETNDRLQRQLTEHHSSHAKLTSQLEFSNKRYEILQ
ETVSAYRREISALQDRNQKMAATSQRHEHIIHTMSQDLRQANEKLALEEVRVENLTKERD
MLRQAESRLTREKEAILAEQRNQNLLLTNLKTIQLTMERTETDTRQRLNNKIEHLEAELA
SMKTRMDQEVAQRHALGRTMDAQLLEAKKQLETQNVLQQKTRDLLRSSEQQVTALKAQLA
SASSSEAVSSSSNATTAAARAASLRAPLRGRPQGPAASPQPSPSQQELAEVKGLLHTAEE
QNGELAEQLKNANATVEQYRAVVLTLEDSLKKEKESRSPLEIRLKESEEVQKQLEKRIIE
VEKMKQLEQEERRKAVDAVEKQVCELQRSLKASQAEQQEALERAAASGTLEQKAIQESLL
QTKLAGEAQAKYERELMLHAADVEALQELKKRLQQEAVQRRELEEQLNKTSSILQEKTAA
LSTLEKQLKEDLSNQSRRCEELSKQNALLHQQMDDMAARSRQQQQQHQQQQLDLSFSEEG
KTTEQILEILRFVQREKQIAVARCDVSEGEALRYKQRVEHQDRELKEQQEALNAEREKMQ
VTAKTLAQQEEQLKKMDSITALQETNRTLRMDRDKLQQEMQQAQAKVTKLQSDISPLHHS
LSQLSEKNGSLQADKRILEDDLKRWKAKAQQLLNQQKDGDVEERQKLTNEREAQQRRIAQ
LAEEAAKLKTELARSSASSNSAQSQLQALRDSVAQLTSERDAQKKQLETKTNDILEKNKT
INQVKKIGRRYKTQYEELKAQHDKLVAETAAKAGSEAAPSQEVQQELTKAQEELNKAREE
LKTLKDEAQKKQEEVQNQLKSAQSQAQARQNQIQQIQRELQQAKEALQQNLTSQKELQQT
SQHSHNQEVGNLKASLSQAEDKVTELQGQLDNLQKTVGEREADVKHLQEQLTEANQANEA
SRATQAVSSQSIQASDANAASEANQAQQEELAKLRQELLESKNREEQLKQQMADKEEKTK
KAFMGAKTKINQLNSQFHLHFTHSSLSEPPTANIRPTPSTPSPSNKPSPSHGSKATPRAS
IRPMVTPATVPIPTPTATVMPTTQTDSQEVLMSAGASVHSTSSGLVSAPASITQPTSTQA
TAFVQPTQQQAANQDAGSSMDAERPSTSSSLIGAGTKRGREEEEEEEEEESRPESSHTPP
TTKKLRLKPSIQLQMEGDEEMEGELGNEGEQQDSPDDSQELPEEGFPVLAEDEEDIEEEG
VSQSVPSYQMSSQGSSIVRDVIVIDTDSESRESKEGEEKQEDEGEEEEEEEEEEEEEEEE
EDDDEDEDDAGDGEMRGGEDSNERSGEAEEEGEEEDPSEASNTEETMCGASSDSQRPSEP
PHSSEGSSSATSESDLTREPVHLPPTSSSSVPSSSSSLTPRLTHPRRPTHSLPPRLYIQP
PAPELGPPHTQRPSSQLRRPSVGRGLQLTPGIGSTQHFFDDDDRMVPSTPTLVVPHRTDG
FAEAIHSPQVAGLSTRFRFGPPEDLLPPSSASHSDLGQLASQGGLGMYESPLFLAAHDED
GGGRSVPTTPLQVAAPVTVFTESLPSDGGDNMASQSVPMVTASTGMPAAADDGDEVFVEQ
EGDGPGIESSLESQTDMESTGQSDDASLPSTSQDPDTSSVTQRRTANSQTLISNLSGRGS
RGGRVEARMLFSRRGTFTRGGRGGGLGRGGIA
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggagcgggcggaactgaacaaactcccgaaaggt
gcccagaacaagctcgagaagttcgtgacggagctgcagggtgctaacgaggcgctcagg
acacagcatgagcggttcaaagcagacagtgagcagcagtactttgacattgagaagaga
ctggtggagagtcaggaacagatcctgtctgccaccagagacctgcagaccttgaaggcg
gaaaataaaaagctcaatgaagagctgaatactctgaaaggaatagagggagaaaccttc
gaagataaaacacctcaacagcaaacaaaggccaagtatgagattgaggcggagaagaga
gagctggcaaggctgctggagaagaggacgcaggaggtggagaaccttactgtggacgtg
aaccgtctaaaagagaagcttacggagacgaacaaactcaagatggagctgcagttaaaa
ctggatgatatccagtcatctgaagcgtctgttcagcaccgggagaagcgtatggagcag
gagaaagagttacttgagaagaagatcgagtggctaactgcagaactgaagaccaaaact
gatgaactgctgaacaacaacagagacaagggcaaagagatactggagctgcagggaagt
ctgaagagcagcaaggagcaggcgaccaggctggaaagtcagctcacttctctgaagcaa
accagcgagagccagagtaaaagagctgaagacctcaacaacaagctgaaacaggctaaa
gacgagcggagcgccatggaggagaaataccgcaatgagctcaacgctcacgtcaagttg
tcttcgctctacaagggggcagcaaccgacatggagaccaagaaccaggagctgagcaga
gcagtggaagagctcagtaagctggtgaaagacagcggggaagccaacaatgttctggag
aagaaagtgtctgagggagagcagctgaagatgcggctggaggcagagctcagtgagaaa
atcaagaaaatggagaaagagctggaaaacgctacaacgaaggccgctggtaaacactgc
tgtgggccgtctctgaccgaggagcagctggacttcatgtgtccgtcggcagctgccatc
gctgcgattgtgaagcccggcatgaagttcttcgatctgtacaatgcgtatgccgagtgt
cagactcagcttcagcttgagaagcaggagaccaagagagtgagcagagtgctggatgag
atcgtgcaggaagtcgagtccaaagcgcccgtcctgaagcgtcagagagaggagtacgag
ggcatgcagagatccatggcctcgctctgcaacaagctggaacaggctcgaatggagatc
tacagtttgcagaaagagaaagaagaggccaagcagcgctgtgatgctgtggagagagag
aagctgagggcggagagacagctagaggacacatctacacaggtgtgctctcttctggtg
gagctggaggaagccagaggtaatcaggtgaccaaggatgacgacggctccgccgacatt
tccagcacctctgaggtcatcagccagcgtcagctgtcgttccgcagcgtggaggagctg
caaaggcagaaccaaagcctgctgggaaggctgagggagctggagcaggagaaggacaga
cagcagagccgtgtcacatccgagcgtatatcggagctggaggccagtgtggataaactt
cagaaggaggtggagcagctgagagagcagaggaaccagcagaaacagctggctgactcc
agcgccaggcagagagacatgtacaaggccctgctgacacacagcactggcttcattctg
cctcctccaggtctggaggcttcatctcaacccgcacatgttcgtccttcagtcccagcg
actcgctcgactccacaaagagctgctgctgccgagtctgcacagaccgctcaggctaaa
gctgctttaaaacagctcaacgacgccttcactctgtataaaaaggagaaagcagagaac
gacaggatgttgaatgaaactaacgaccggctgcagagacagctgacggagcaccactcc
agccacgccaagctgacctctcagctggagttcagcaacaagaggtatgagatcctccag
gagactgtatcggcctatcgcagagagatctctgccctccaggacaggaaccagaaaatg
gctgcaacgagccaacgacatgagcacatcatccacacgatgagccaggacctgcgacag
gccaacgaaaaactagctctggaggaggtgcgtgtggagaacttgaccaaagagagagac
atgttgagacaagcagagagtcgcctgactcgggagaaggaagccatattggctgaacaa
cgtaaccagaacctgctgctcaccaacctcaagactatacagttgaccatggagcgcaca
gagacggacacgcgccagcgactgaacaacaagatagagcatctggaggcggagcttgct
tccatgaagaccaggatggaccaggaagtagcacagagacatgctctcggacgcactatg
gacgctcagttgttggaagcaaagaagcagctggagacgcagaacgtcttgcagcagaag
accagggacttgttgcgtagctctgaacagcaggtgacggcgctgaaagcccagctggcg
tctgcttcgtcctctgaggccgtgtccagctccagcaacgccaccaccgcagccgccaga
gccgcaagcctcagagccccactgagaggacgccctcaaggaccggcagccagtccgcag
cccagcccgtcgcagcaggagctggcagaggtgaaaggtctcctgcacaccgccgaggaa
cagaacggtgaactggcagagcagctgaagaatgctaacgctactgtggagcagtacaga
gctgtggtcctgactctggaggacagtctgaagaaagaaaaggagtctcgctcccccctg
gagatccgactgaaggagtcggaggaggtgcagaagcagctggagaagaggattatagag
gtggagaaaatgaagcagctggagcaagaagagaggaggaaggctgtggacgcagtggag
aaacaagtgtgtgagctgcagcgcagtctgaaggccagtcaggccgagcagcaggaggca
ctggagagagctgctgcttctggtacactggagcagaaggccatacaggaaagcctgctg
cagactaagcttgccggagaggcgcaggcgaagtatgagcgggaactgatgctccatgct
gctgacgtggaggctctgcaggagctcaagaaacgactccaacaggaagcggtgcagagg
agggagctggaggagcagctaaacaagacctcctcgatcctgcaggagaaaactgcagcc
ttgagcacactggagaaacagctgaaggaggacctgtctaatcagagccgtcgctgtgag
gagctgagcaagcagaacgctctgctgcaccaacagatggatgacatggccgccaggagt
cgtcagcagcagcagcagcaccagcaacaacagctggacctgtcattcagtgaggagggc
aagaccactgagcagatactagaaatactcaggtttgtgcagcgggagaagcagatcgcc
gtggctcgatgtgatgtgtccgagggagaagctcttcgctacaaacagcgagtcgagcac
caggacagagaactgaaggagcagcaggaagctctgaacgctgagagggagaaaatgcag
gttacagcgaagactctggcccagcaggaggagcagctgaagaagatggacagtatcact
gctctccaagaaaccaacaggacgctgagaatggacagagacaaactgcagcaggagatg
cagcaagcgcaggctaaagtgacgaagctgcagtcggacatcagcccgctgcatcactct
ctgtctcagctgtcggagaagaacggctccctgcaggcggacaagaggattctggaagat
gacctcaaacgctggaaggccaaagcacagcaactgctcaaccagcagaaagatggagat
gtggaggagagacagaaactgaccaacgagagagaagctcagcagagacgcatcgcacag
ctcgctgaagaggcggccaagctgaagactgaactggccagatccagtgccagcagtaac
tcggctcagtctcagctgcaggccctcagagactctgtggcccagctgacgtcggaaaga
gacgcgcagaagaaacaattggaaacaaaaaccaacgacattctggagaaaaacaaaacc
atcaaccaggtcaaaaagatcggacgacgctacaagacccagtatgaggagctcaaagcc
cagcatgacaagctggttgcggaaacggcagctaaagcgggaagtgaggcagctccgagc
caggaggtgcagcaagagctgactaaagcccaggaggagctgaacaaagccagagaggag
ctgaaaacactgaaggacgaggcgcagaaaaaacaggaggaggtgcagaaccagttgaag
tcggctcagtctcaagctcaggcccgtcagaaccagatccagcagatccagagggagctc
cagcaggcgaaagaagcgctccagcagaacctcaccagtcagaaagagctgcaacagacc
agccaacacagccacaaccaggaggtcggcaatctcaaggcttccctgagccaagcggag
gacaaggtgactgagctccagggacagctggacaacctgcagaagacggtcggcgagcgt
gaagcagacgtcaagcacctgcaggagcagctaactgaagctaaccaggctaatgaagct
agccgtgccacacaggccgtgagttctcagtccatccaggccagtgatgctaacgctgct
agtgaagctaaccaggcacaacaagaggagctggctaaactcagacaagagctgttggag
agcaagaaccgagaggagcagctgaaacagcagatggctgacaaagaggaaaagaccaag
aaggccttcatgggagcgaagaccaaaatcaaccaactgaacagtcagtttcacctgcac
tttacacactccagcttgtctgagcctcccaccgctaacatccgacccaccccgagtact
ccgtctcctagcaacaagccaagcccctcccatggtagcaaggccacgccccgtgccagc
atccgacctatggttaccccggcaactgtccccatcccgacacccaccgccaccgtcatg
ccgaccacacagactgacagtcaagaggtgctgatgagcgcaggagcctctgtacactcc
accagctccggcctcgtgagcgcacccgcctccataactcagccaaccagcacacaggcc
acagcttttgtccagcccactcagcagcaggcagccaatcaggatgcggggtctagcatg
gatgcagagcgaccatccacgtcctcctctctgattggagcaggtacaaagcgaggcaga
gaagaggaggaggaggaagaggaagaggagagcagaccggagagttcccacacaccaccg
accactaaaaaactacgactgaaaccatcaatacagctgcagatggaaggtgatgaggag
atggaaggagagctggggaatgagggcgaacaacaggattcacccgacgacagtcaggag
cttccagaggagggtttccccgttttagctgaagacgaagaggacatcgaggaagagggc
gtgtcccagtctgtcccctcctatcagatgtcctctcagggctcttccatagtccgggac
gtcattgtgatcgacacggacagcgagagccgggagagcaaagagggggaggagaagcag
gaggatgaaggagaggaggaagaggaagaggaggaggaagaagaggaagaggaggaggaa
gaagatgacgacgaagacgaggacgacgctggcgacggcgagatgagaggaggagaggac
agcaacgagaggagcggagaggccgaggaggaaggagaggaggaggatccgtcagaagcc
agcaacactgaggagaccatgtgcggggcgtcctccgactcccagcgtccctctgagccg
ccgcacagcagtgaaggcagcagcagcgccacgtcagagtctgacctcaccagagagcct
gtacacctccccccaacctcttcctcctctgttccctcctcctcctcctccctcacaccc
cgcctgacccacccccgtagacccacacactctctcccacctaggctctatatccaacct
ccagccccagagctgggacccccacacacacagagaccgtcctctcagctgcgccggccg
tcagtaggacgagggcttcagctgacccccgggataggcagcacgcaacatttctttgac
gatgacgacaggatggttcccagtactcccactttggtggtcccacaccgcactgatggt
ttcgctgaggctatacattctcctcaggtcgcaggtctgtccaccaggtttagatttgga
cctccagaagacctgctgcctccgagttcagcctcacactctgacctgggacagctggcc
tctcaaggaggtttggggatgtacgagtctcctctgttcctggctgctcatgatgaagat
ggaggagggaggagtgtccccaccacacctttacaggtggctgcaccagtgaccgtcttc
actgagtctctgccctcagacggcggtgacaacatggcatcccagtccgttcccatggta
actgcttccaccgggatgccggctgctgcagacgatggagatgaggtgtttgtggagcag
gaaggagacgggcctggtatcgagtcttctttggagagccagacggacatggagtcaacc
ggacagagtgacgatgcatcgctgccgtctaccagccaagaccctgacaccagcagtgtc
actcagcggcgcacagccaacagccaaaccctgatcagcaacctgtcgggcagagggtcc
agaggagggagggtggaggccaggatgttgttcagccgcagaggaaccttcactcgagga
ggaagaggggggggcctgggcagagggggcatcgcctaa
DBGET
integrated database retrieval system
