Seriola lalandi dorsalis (Yellowtail amberjack): 111661952
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Entry
111661952 CDS
T06058
Symbol
hspg2
Name
(RefSeq) basement membrane-specific heparan sulfate proteoglycan core protein
KO
K06255
basement membrane-specific heparan sulfate proteoglycan core protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04512
ECM-receptor interaction
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111661952 (hspg2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111661952 (hspg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111661952 (hspg2)
00535 Proteoglycans [BR:
slal00535
]
111661952 (hspg2)
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111661952 (hspg2)
Proteoglycans [BR:
slal00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111661952 (hspg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
Laminin_G_1
Laminin_B
Laminin_G_2
V-set
Laminin_EGF
Ig_6
C2-set_2
Izumo-Ig
Laminin_G_3
Ig_C17orf99
EGF
C2-set
hEGF
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
111661952
NCBI-ProteinID:
XP_023271432
LinkDB
All DBs
Position
Unknown
AA seq
2696 aa
AA seq
DB search
MGVTKQCASSTWNRDQVRGGVNGQLFSLSNSANTKTISEGISQRGSSEVVYRSFSSVPND
IYYWVLPESFRGDKVTAYGGELRYTVQFTPFQRSLVIDGKPDVVLQGNGIFLEHYSQTKP
LPRVRQTVTVTFRESSWRRSDGQPCTREHLLMALADVTVFMIRATYTDNMDESSISDIKM
DIAVPHSTGNERALEVEECSCPQGYRGPSCQECDEGYTRTSSGLYLGTCERCDCNGHASS
CDPETGRCLQCLHNTAGPRCERCQPGFYGNPVTGGAQACQPCPCPGTTSSNQFSPTCYLE
SDGQPTCDSCPPGYSGRRCERCAAGYTGNPQLGQRCTVGNNEVNGNCYNCDQRGREICTG
GVCRCKMNVEGSSCSSCKPGTFHLSQANKDGCLSCFCMGVTQQCSSSTYYRDLVSSVFSP
GNFQGFALVNRQRTNRISTGFTVEVSTEGTQLSYSNFDYLGQEPHYWQLPGVYQGDKKDP
LFTRTRRGKQSDSNLPEERLRKDASIWSLMASERKDAHRSKRASQYALVYKGFSLHQDDL
LYWQLPALFTGDKVGSYGGKLKYTVSYVAGPRGTLLDDADVQIIGNDITLVARQSWQRRQ
QGSRETHRFEIVFREENWRRPDGMPATREHLMMVLADLDDILIRASYSTEMRSSSISDIN
MEVAVPNYSGLAQALEVEQCRCPPGYQGLSCQDCAPGYTRTGGGLYLGHCELCECNGHSD
SCHPETGICTSCLHNTQGELCEQCAPGFFGDPTVGTPEDCQPCACPHTDPDNQFSPTCES
LGNGGYQCTACQPGYTGQYCERCAPGYVGNPQEREKCRPYDAAASLVVKVYPERVLASQG
GPVTLRCQVSGSPPHYFYWSREDGRPISGSADRRRQGAELYFPNVQQSDAGVYVCTCRDQ
RSTNRSRAEIVVTSVQSRPIEVTIEEPKAQTVRVGSTVSFICTAKSKSPAYTLVWTRMGN
GKLPNRAMDFNGILTIQNVQPEDAGVYVCTGSNMFAMDEGSAILYVPEASQTQMFYTAYE
MFEGHRKPGEGAQPVATITPSVLNVQQGQRAEFRCTVTGNPTPAIEWIGGPGNRLSPRAV
IRGGVLTFTAVDPADEGEYTCKALNTHGEHTARVSLFIQKSNPSGLGTQPQVQVSPQNVE
VHEGDTLRLYCRASGSPTPKLTWLKNGGQIPPQAIPSHGFHQFKSNSVDVLQRRIEELQA
RMERTDIGTLLIPNIKMSDSGTYMCVGSNSIGSNSAPIKVTVLKADHISSVVSIQPSIAD
VQEGQNLELNCFAPGNPPPQVTWTRASGRLSSNHQVLGSQLRILSASPEDSGEYICRVQS
NTGNPGSRVHQASVSVSVTSSSSRLQSPIIAIEPHSAAVRVGESASFRCRVYSGAQPVRL
EWKLASNQPLPDNVKVGPDGSVITITSARPINHGAYRCVASNPFGITHTIVSLIVKEIPV
ATVTPVGPVRVRVGEPINLECQASGEPRPSVSWHRLDSNRKTMLSSPVPMESNAVMQILV
ARPEDSGTYVCTARNNEGSTETNIEVVVEGGSQVPSVPRGSVPEPLMIVVEGQTATLRCE
AHGFPSPKITWSKLRSPLPWRHKVVNNSLVLPNVGRQDSGEYICSATNNMGTTDVTIMLD
VETLPYATSVPDDVAVRVGEVIRLQCLAHGTPPLTYTWTKLDGNLSPRAQVSGGDLQINL
AAAEDAGSYKCVASNKVGNSEVVAKVTVRSPLAVRVSPQVEVKAQGSAVEFTCSAAGGIE
TKIEWLKEGGALPPNHHIKDGVLRIENLEQSNEGVYICRASSVYGQAQDTARLTIQALPK
VMINVRTSVQTVMIGNSVEFECQAVGDPEPTVKWSKVGGALPTHIMVKGGMLKIDQVTEA
DAGQYRCTATNDVGSVQSQVVLNVQSLPQIAALPETKEVTVGSDAVLPCVASGYPVPEIK
WSKLEGELPPKCFQEVNVLTVPRITHDDSGTYVCTASNKQGKVEAFTTLMVHERVMPYFA
QEPLSYLTLPTIKNAYKAFSIKINFRPDNVDGMILYNGQRRTTGADFISLGLVGGRLEFR
FDVGSGMASIRDPNPIKLGEFHTVELYRNHTLGYIIVDGGEPINGSSQGKFQGLDLNEEL
HVGGYPNYTLLAKTAGIKTGFVGCIRQLVIQGEEVIFKDLDRSSTGVSNCPTCKDHPCQN
GGRCEDSDASLYKCSCPRGFTGSNCQHHSSLHCHSEACGPDATCINRLNGLGYDCRCHLG
KFGNKCMDGELVTTPLFDGEESYIAYPPLTNIHDDLRVELEFKPVDRDGLMFFCGGKKMK
VEDFVAISMVDGHVEFRYELGTGQAILLSAEPVSLGQWHRVVAERNKRAGHLRVDQGQVE
RKTSPGKAQGLNIHTPMYLGGVPNMDILPKPANISELFQGCIGEVSINNKKVDLSYSFTE
SRSIRKCVDNSPCDRRPCLNGGHCMSSAEYEYQCLCRDGFEGERCEVVKDVCQNNLQCQN
GGSCVDGQCVCAPGYTGLNCEESQVSSFPEALWNLEVSEANDSPYQYAAHFHNDGYIALP
KSIFPRSAHDSPETIELEINTGSSEGLILWQGVELGEHGRGKDFISLGLQNGHLVFSYQL
GSGEAQILSQRSINDGKWHKITAVRTGKDGYIQIDGGAALHGQSKGKSLMVNTKGSVYLG
GAPDMAAMTGGKFLSGMTGCVRNLTLMNARPGQQPAQAIDLQSHAAHGINVQPCSS
NT seq
8091 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcaccaaacagtgcgccagctccacttggaatagggatcaggtgcgaggaggg
gtgaacgggcagctcttctccctctccaacagcgccaacactaaaactatctctgaaggc
atctcccagaggggttcctctgaagttgtctaccgctccttctccagcgtccccaatgac
atctactactgggttctgcctgagagcttcagaggagataaggtgacggcctatggaggg
gagcttcgctatacagtgcaatttacaccctttcagcgctcgctggtgattgacgggaag
ccagatgtggttctccagggcaacggcatcttcctggaacactattctcagaccaagccc
ctcccacgtgtccgacaaaccgtcactgtgacctttagagagtcttcgtggcgtcgcagc
gatgggcagccgtgtacccgtgagcacctgcttatggctctggctgacgttaccgttttc
atgatcagggcaacctacacagacaacatggacgagagcagtatctcagacatcaagatg
gacattgctgttcctcactccactggtaatgaacgtgctctggaggtggaggagtgctcc
tgccctcagggatacagaggaccctcctgccaggagtgtgatgaaggttacacgcgcacc
agctctggcctctacctgggcacttgtgagaggtgcgattgcaatggtcatgccagcagc
tgcgacccagagaccggcaggtgtctgcaatgtctccacaacactgctgggccaaggtgt
gaacgctgtcagcctggtttctatggaaaccctgtaacaggcggtgctcaggcctgccag
ccctgcccatgtcctggaaccacatccagcaaccaattctccccgacttgttatctggag
tctgatggtcagccgacctgtgacagctgtccccccggatacagtggccgtcgctgtgaa
agatgtgctgcaggatacactggcaacccacagctgggacagagatgtactgttggcaac
aatgaagtcaatggtaactgctacaactgtgaccaaagaggacgtgagatctgcactggt
ggtgtgtgccgctgcaagatgaacgttgaaggctcgtcttgctccagctgtaagcctggg
accttccatctaagccaggcaaacaaagatggctgcctgtcctgtttctgcatgggcgtc
actcagcagtgctccagctccacttactacagagacctggtgtcctcagtcttttctcca
ggcaacttccagggatttgctctggtgaaccgtcagcgcaccaaccgcatctctactggt
ttcacggtggaggtttccactgaaggcactcagctgtcctacagcaactttgactacctg
ggacaggagcctcactactggcagctcccaggggtctaccagggagacaagaaagatcct
ttatttactcgcacgagacgaggaaaacagagtgactccaacttgccagaggagcggcta
aggaaggatgcttccatttggagcctgatggcctcagaacgtaaagacgcccacagatca
aaaagagctagccagtacgctctggtctacaaaggtttcagcttgcaccaggatgatctg
ctctactggcagctcccagcgctgttcacgggggataaggtgggttcttacggaggtaaa
ctcaaatacaccgtctcctacgtggctggtccaaggggaacgctgctcgacgatgctgac
gtgcagattattggtaacgacatcactctggtggctcgtcagtcctggcagaggaggcag
cagggcagcagagagactcaccggtttgagattgtctttagagaggaaaactggcgccgt
ccggatggcatgcctgcaacccgtgagcacctgatgatggttttggctgatctggatgat
atcctcatccgagcatcctactctaccgagatgcgatcctccagcatctctgatatcaac
atggaagtcgctgtgcccaactacagcggcttggcgcaggccctcgaggtagagcagtgt
cgctgtccacctggataccagggactctcttgccaggactgcgcccctggatatactcgc
actggaggaggtttatacctgggtcactgtgagctctgtgaatgtaacggccactctgac
tcctgccatccggagactggcatttgcacgagctgcctgcataacactcagggcgagctc
tgtgagcagtgcgcccctggtttcttcggcgaccccactgttggcactccagaggactgc
cagccctgcgcctgcccccacactgaccctgacaaccagttctcccctacgtgtgagagc
cttggaaatggaggctaccagtgcactgcctgtcagcctggctacaccggccagtactgt
gagcgttgtgctcctggatatgttggcaacccacaggagagagagaagtgtcgcccatac
gatgctgcagcctccctggtggtgaaggtttatccagagagggtcttggcatcccagggt
ggccctgtcactctgcggtgccaggtgtctggctctcctccgcactacttctactggtcc
agagaggatgggcggcccatctccggcagtgcggacagacgcagacaaggagcagagctg
tacttccccaatgttcagcagagtgatgccggcgtttacgtttgcacctgccgagaccag
cgcagcaccaacaggagccgtgctgaaatcgttgtcacaagtgtccaatccagacccatt
gaggtgacaattgaggagcccaaagcccagactgtcagggtggggtctactgtcagcttc
atctgtactgcaaagagcaagtcaccagcctacaccctggtttggacccgaatgggtaac
gggaaacttcccaaccgtgccatggacttcaacggcatcctgacgatccagaatgtccag
cccgaggacgctggcgtctacgtttgcacgggctccaacatgtttgccatggacgagggc
agcgccatcctctacgtgccagaggcctcacagactcagatgttttacacagcctatgaa
atgtttgaaggacacagaaagcctggtgaaggggcccaacctgtggccaccattactccc
tcagtactgaatgtccagcaaggccagagggcagagtttcgctgcacagtaactgggaac
ccaacccccgccatcgaatggatcggaggtccagggaacagactgagtcccagagcggta
atacgaggtggcgtactgaccttcacagcagtggacccagctgatgagggagagtacacc
tgcaaagccctgaacactcatggcgagcacacagcgcgggtttccctcttcatacaaaaa
tctaacccaagtggcctaggcacccagcctcaagtccaagtcagtccccaaaatgttgaa
gtccatgagggcgacacattgaggttgtactgccgcgcatctggatcgcccacgccgaag
ctcacctggctgaaaaatggaggacaaatccctccacaggccattccctctcacggtttc
catcagtttaaaagcaacagtgtcgatgtgttacagagacgtattgaggagctgcaggcc
cgcatggagcgcaccgacattggcactctgctcatccccaacatcaagatgtccgactca
ggcacttacatgtgtgttggcagcaacagcattggctcgaatagcgctccaatcaaagtg
acggtgctcaaagcggaccatatctcatcagtggtcagcatccagccatctatagctgat
gtccaggagggccagaacctggagctcaactgtttcgcccctggaaatcctcctccccaa
gtcacctggacgagagccagtggacgcctctcctccaaccaccaagttctgggcagtcag
ctgcggatcctgtcagcctctccagaagactcaggagagtatatctgtcgggtgcagagc
aacactggaaacccaggctctcgtgtccatcaggcctctgtctctgtgtctgtcacttca
tcttcttcacgtcttcagagtccaatcatcgccattgagccccacagtgctgcagtgcgt
gtgggggagtcagctagcttcaggtgcagggtgtacagcggagcccagcctgtcagacta
gagtggaaactggccagcaaccaaccgctgccagacaatgtcaaagtcggccctgatggt
tctgttatcaccatcaccagcgctcgccctatcaaccacggtgcctaccgctgtgtggcg
agcaacccgttcggcatcactcacaccattgtgtctttgattgtcaaagagattcctgtg
gccaccgtcacccccgttggacctgtgcgcgtcagagtgggcgaacccattaacctggaa
tgccaggcgtcaggagagccacgcccctcagtgtcgtggcaccggctggacagcaaccgt
aagaccatgctgagcagccctgtacccatggagtccaatgcagtcatgcagatactcgtg
gcacgtccagaagacagtggcacgtacgtgtgcacagctcgcaacaatgagggctctacg
gagaccaacatagaggtggttgttgagggaggctctcaagttccatcagtgcccagaggc
tccgttcctgagccgctgatgattgtggtggagggacagactgcgacactgcgctgcgag
gcccacggtttcccctcaccaaaaatcacctggtccaagctgcggtctcccctgccttgg
agacacaaggtggtgaacaacagcttggtgctgcccaacgtgggccggcaagactctgga
gaatacatctgcagtgccaccaacaacatgggcaccactgacgtcaccatcatgctagat
gtagaaactcttccttatgccacatctgtgcctgatgatgtggctgtgcgcgtcggcgag
gtgatcaggttgcagtgcctggcccacggcactcctcctttaacctacacttggaccaag
ctggatggaaacctgtccccgagggctcaggttagcggcggggatctccagatcaacctg
gccgctgccgaggatgccgggagctacaagtgtgtggccagcaacaaagtgggcaacagt
gaagtggtcgccaaagtcacagtcagatctcctctggcggtgcgtgtgtcaccccaggtt
gaggtgaaggcccagggcagtgctgtggagtttacctgctcagcggcaggtggaatagaa
accaaaattgagtggctgaaagaaggaggcgccctgccgccaaaccaccacatcaaggat
ggagtgctcaggattgagaaccttgagcagagcaatgaaggtgtttatatctgcagagcg
agcagtgtgtatggtcaggcccaggacactgccagactgaccatccaagccctgccaaag
gtgatgatcaacgtgcgtacctcggtgcagaccgtgatgattgggaactctgtggagttt
gaatgccaggctgtcggtgacccggagcccaccgtcaaatggagtaaagtaggcggggct
ttgccaactcacatcatggtgaaaggcggcatgctgaagatcgatcaagtgacggaggcc
gacgctgggcaataccgctgtaccgccaccaatgacgtaggctcagtacagtcccaagtg
gtccttaacgttcagtcccttcctcaaatcgctgcactgccagaaacaaaagaggtgaca
gtcgggtctgatgcagtcttgccctgtgtggcctcaggatatcctgtgcctgaaatcaaa
tggtccaagctggaaggagagcttcctcccaagtgtttccaggaggtcaacgtgctgacg
gtccctcgcatcacccatgacgattctgggacatatgtctgcaccgcctccaacaaacag
ggcaaagtggaagcctttactacacttatggttcatgagagagtgatgccgtactttgcc
caggaacccttgtcttacctcaccctgcccaccatcaaaaatgcctacaaggctttcagc
attaagatcaactttagaccagacaatgttgatggtatgatcctctacaatggccagagg
aggaccacaggagccgactttatctctctgggacttgtgggcggtcgcttggagttcagg
tttgacgtgggctccggcatggccagtatacgtgaccccaaccctatcaaactgggagag
tttcacaccgtcgagctctatcgcaaccacaccctgggctacattattgtagatggaggg
gagcccatcaacggcagctcacagggcaagttccagggtctggatctgaatgaggagctg
catgtgggtggataccctaactacacactcctcgccaaaaccgctggcattaagaccggg
tttgttggctgtatccgtcagctagtcatccagggtgaggaagtcatcttcaaagatctg
gaccgcagctctactggcgtcagcaactgtcccacctgcaaagatcacccatgccagaat
ggcggcaggtgtgaggactcggatgccagcttgtataagtgcagctgccccagaggattc
accggaagcaactgccagcaccactcatccctgcactgtcactcagaggcctgcggaccg
gacgccacttgcatcaatcgcctgaatggcctgggctacgactgccgctgccatcttggc
aagtttggaaacaaatgcatggatggagaactggtgaccactccactgtttgatggggag
gagtcatacatagcctatccccctttgaccaacatccacgatgacctgcgtgttgagttg
gagttcaagccggtggatagagacggcctgatgttcttctgtggtgggaagaaaatgaag
gtggaggactttgtcgccatctccatggtggacggacatgtggaattcagatatgaactg
ggcacaggccaagcaatccttctcagtgctgagccagtctctctgggccagtggcacaga
gtcgtggccgagcggaacaagagggccggccacctgagggtcgaccaaggccaagtggag
aggaagacatctccaggaaaagcccagggccttaatatccacacccccatgtacctggga
ggagtccccaacatggacatcctgcctaagcctgcaaatatcagcgaattgtttcaggga
tgtataggagaggtttctatcaacaacaagaaggtggatctgtcctacagctttacagaa
agcagatctatccgcaagtgtgtggacaacagcccctgcgaccgccggccctgtctgaac
ggtggtcactgcatgtcgagtgctgagtatgagtaccagtgcctctgtagggatggattt
gaaggtgagcggtgcgaggtggtgaaagatgtgtgccagaacaaccttcagtgccagaat
ggcggcagctgtgtcgacggtcagtgtgtgtgtgcacctggctacacaggcttgaactgt
gaagaaagccaggtctccagcttccccgaggccctgtggaatttggaagttagcgaggca
aatgattcaccctaccaatatgcagctcatttccacaatgatggatacattgcccttcct
aaatccattttcccgagaagtgcccatgactcaccagagaccatcgaactggagatcaac
actggctcctctgagggtctgatcttatggcagggagtggaactcggagaacacggcaga
ggcaaggacttcattagtctcggcttgcagaacggacatcttgtttttagttaccagctg
ggcagcggagaggcacagatcttgtcccagaggtctatcaacgatgggaaatggcacaag
atcacagcagtcagaactggaaaagatggatatatccagattgatggaggagccgcacta
catggacagtctaaaggcaagagcctcatggtcaacactaaaggcagtgtataccttggt
ggagccccagacatggctgctatgacgggaggcaagtttttgtcaggaatgacgggctgc
gtgaggaacctgacgctgatgaacgcccggccgggccagcagccggcccaggccatcgac
ctgcaatcccacgcagcccacggcatcaacgtgcagccgtgctcttcatag
DBGET
integrated database retrieval system
