Seriola lalandi dorsalis (Yellowtail amberjack): 111663297
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Entry
111663297 CDS
T06058
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
111663297
NCBI-ProteinID:
XP_023273227
LinkDB
All DBs
Position
Unknown
AA seq
2135 aa
AA seq
DB search
MFQPCDHTPFFLQALDDGIFVFFAGEMVVKMVALGVIGQSGYLGDTWNRLDFFIVIVGML
EYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLALCFFVFFIF
GIVGVQLWAGLLRNRCFMGEDVKMRYNISFLSGYYRPDGTDDHPFICSTERENGMLRCSD
VPRRRVGGTFCLLGAEEARPEMGLRVEEEVSCVNWYQYYNECRAGEINPHKGAINFDNIG
YAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFIFLIIVGSFFMINLCLVVIATQFSET
KQREHALMKSEQRARQLHQSASTLASDSQPGSCYEEIIRYLAHLGRKAWRRLSRYYAQTR
PHLHCVCVCQRDRGGGSARGSGVGEMNGLAHRHSGHAPNDLSHLQQLYHHHQNHHQHHQP
QPEPAVSNGGNVYNYPFISPLFSHLDAKGRDQKRLAAKETVNRLPQLVLEHGGCSGHPAL
LLPGEVPGESSVCPYCIYYNQLRDNENVNELPEDQQLGYSNSCHGNSPCHSNSPCHCSSP
CRGDAQVSEPKKRLFQRCWAGLRTKLELIVGSRYFNRGIMIAILINTLSMGIEYHEQPQE
LTDILEISNMVFTSLFSLEMLLKLLALGLFGYIKNPYNGFDSVIVIISVWEIVGEAEGGL
SVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCK
FGLRQDSGDTLPDRKNFDSLLWATVTVFQILTQEDWNAVLYNGMASTTPLAALYFVALMT
FGNYVLFNLLVAILVEGFQAEGDANRSESDDERQSLSYEDEEKLRDLYAAELKIQAMMLS
PNGLLNPKASMPLPPPPPLPVITHTAATPTINSSQSRRASGASMDVNSLEQRSPVSTQSM
WDSGPESRRSSWTSIGRAPSLHRKSQSGEMESLLSDTHTSSNLSSREQSLDQPEYLQVPM
LHPPDCNGTTFHLPDNCYDEAPLATHYLSDQEEEEIEESLCKKLKKMLEPYEPQWCLEHE
EWSLYLFSPQNRLRLWCQRVVSHKMFDHVVLLFIFLNCITIALERPDIQPNSMERVFLSV
SNYIFTVIFVGEMMIKVLAMGLYFGNGVYLQSSWNILDGLLVFVSLVDILVSIASAGGNR
ILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQ
LFKGKFFYCDGLDVTNITNKSQCLEAGYRWDRRKYNFDNLGQALMSLFVLSCKDGWVSIM
YDGLDAVGVDQQPIRNNNPWMLLFFISFLLIVSFFVLNMFVGVVVENFHKCRQQQEEEEA
RLREEKRQRRLEKRRRRAQEKPYYADYSPLRRSIHTVCTSHYLDLFITIIIFTNLLTMSM
EHYNQPKYLEEILKYCNYVFTVVFVIEAILKLIAFGLRRFFKERWNQLDLAIVLLSIMGI
TLEEIDLNASLPINPTIIRIMRVLRITRVLKLLKMATGMRALLDTVMQALPQVGNLGLLF
MLLFFIYAALGVELFGKLECSDENPCEGLSRHATFDNFGMAFLTLFRVSTGDNWNGIMKD
TLRECRPQDRHCLTYLPLISPIYFVTFVLTAQFVLVNVVVAVLMKHLEESNKEAQLEEME
ERKEREEMREREERREREREEANRRLSAASLSGDLGPNVDAPAQVQVEDDECSHGNLLSM
GRMLSLPSDSYVQPVRCSPHPPVGHEAYSSYSYSGSMSSLGSSGGGSLLQVPGALPVISH
ASLGSGRSSRPMICLSTSQSIDRYSPHRLSPADSVEGYRFSPAHRINRHRLNSAHSIDGY
KFSPAHRINRHRLSSAHSIDGYRLNQEHKTERPKLMSSHSIDRHPSLRLSPTHSASRRPS
YWLSPEDSLDRNKLSPSYVPESSVLRRPASLRTASRQLRRQEAVRSDSLDQSGSADDLAE
PHLTASAVSSTPPRQRSSSVHTLKYTHPQRVISCRSHSRSHSETTGQEHVPPERAICGSQ
PETDDEKRPVSPQSLSSLKVPGGESTISAPLCSSRAASPGPTSDPGPQLDDADEEVSRIN
SSVHTHSHTQRPPSSSHKSRHLTPSPGEHRSRLSQSVSPVSGGNRKQRMSPPPGEEPVTM
ATQLMDSSVELRRRTLSFDATTLSPNQPEESSVDD
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
atgttccagccgtgtgaccacacccccttcttcctgcaggctctggatgatgggatcttt
gtgttttttgccggggaaatggtggtgaagatggtggctcttggggtcataggtcagagt
ggttacctaggcgacacgtggaacagactggacttcttcattgttatagtgggaatgctg
gagtactcccttgatggacacaacgtcagcctatcagctatccggactgtgcgggttctc
cgcccactgcgagccatcaacagagttcccagtatgcgtatcctggtgaccctgctcctg
gacacacttcccatgctgggcaacgtgctggcactgtgcttctttgtcttcttcatcttc
ggcatcgttggcgtgcagctgtgggcggggctactgaggaaccgctgtttcatgggagag
gatgtcaagatgagatacaacatttccttcctgagtggctactatcggccagacggcacc
gatgaccaccccttcatctgctcgacagaaagagaaaatgggatgctgcggtgctctgat
gtgcctcgccgccgtgtaggcgggactttctgtctcctgggtgctgaggaggcccgtcca
gagatgggacttagagtagaagaagaggtctcctgtgtgaactggtatcagtattacaac
gagtgtcgagctggagaaataaacccacacaaaggggctattaactttgataacattgga
tacgcatggattgccatttttcaggtaattactctggaaggctgggtagacatcatgtac
tatgtcatggatgcacattccttctacaacttcatatacttcattttcctcattatagtg
ggctccttcttcatgatcaacctgtgcctggtcgtcatagcaacccagttttctgaaact
aagcagagggaacacgccttaatgaaatcggagcagcgcgcccgtcagctccaccaatca
gcttccacgctggccagcgacagccaaccgggaagctgctatgaggagatcatccgctac
ctggcgcacctgggccgcaaggcatggcgacgactgtcccgctactatgctcagacacgc
ccacaccttcactgcgtgtgcgtgtgccagagagacagaggcggtggatctgccagaggg
agcggagtcggggagatgaatggactcgcccaccggcactcaggccacgcccccaacgac
ctgtcacaccttcagcagctctatcatcatcaccagaatcaccatcagcatcatcagcct
cagcctgaacctgctgtcagtaacggagggaacgtttataactatcccttcatatcgccc
ctcttcagccacctggatgctaaaggccgggaccagaagaggctggctgccaaggagacc
gtcaacagactgccgcagctggtgctggagcacggtgggtgcagcgggcatcctgcgtta
ctgttgccgggcgaagtcccaggagagtcctcagtatgcccctactgcatctactacaac
caacttagggacaacgaaaatgttaatgagctgcctgaagaccagcagcttgggtacagc
aactcatgccatggcaacagcccgtgtcatagtaacagcccatgccactgtagcagtccc
tgccgcggtgatgcacaggtgtctgagccaaagaaaaggctgttccagcgctgctgggcg
ggtctccgaactaaactcgagctcattgttggcagcagatacttcaacaggggaatcatg
attgccatccttattaacacactgtcaatgggcatagagtaccacgaacagccgcaggag
ctgacagatattttggagatcagtaacatggtgttcacaagtctcttcagcctcgaaatg
ctgctgaagctcctggctctcgggctctttggctacatcaagaacccttacaacggcttt
gacagcgtcattgtcatcatcagtgtgtgggagattgtgggggaggcagagggaggctta
tcggtgctgcgtaccttccgtctgctgagagtgttgaagctggtccggttcctccctgcc
ctgaggaggcagctggtggtgctgatgaagaccatggacaatgtggccacgttctgcatg
ctgctgatgctctttatattcatattcagtatcttggggatgcatctgtttggctgcaaa
ttcggtttgcgacaagacagcggagacactttacctgacagaaaaaactttgactctctg
ctgtgggcgactgtcaccgtgtttcagatcctcacccaggaggactggaatgcggtgctc
tataacgggatggcctccacgacgccgttggctgccctctatttcgttgccctcatgacc
tttggaaactacgtcctcttcaacttgctagttgccattttggtcgagggctttcaagct
gaaggtgatgccaacagatctgagtcagatgacgagagacaatcactctcttacgaggac
gaggagaagttgagagatttatacgctgcagagctcaagatccaggccatgatgctgagc
cccaatggtctcctgaacccaaaggcctccatgcccctccctcctcctccacctctgccg
gtcatcacacacaccgcagcaacacccaccataaactccagccaatcgcggcgggcgagt
ggtgcttccatggatgtcaacagcctggagcagaggtcaccggtgtctacacagtctatg
tgggacagcgggccagagagccgccgctccagctggaccagcatcggtcgagcccccagc
ctccacaggaagagccagtcgggagagatggagtccctgttgtctgacacacacacgagc
tccaacctcagcagcagggagcagtctctggaccagcctgagtacctacaggtgcccatg
cttcacccgcccgactgcaacggcaccacctttcacctccccgacaactgctacgacgaa
gctcccctggcgacacattacctcagtgatcaggaggaggaagagattgaagagagttta
tgtaagaagctgaagaagatgctggagccatatgagcctcagtggtgcctggagcatgaa
gagtggtccctctatctgttctctccacaaaaccggctcaggttgtggtgtcagagggtc
gtgagtcacaagatgttcgaccatgtcgtcctcctcttcatcttcctcaactgtatcacc
atcgcactggagaggcctgacatacagcccaacagcatggagcgggtgttcctcagtgtg
tccaattacatcttcactgtgatcttcgtgggtgaaatgatgatcaaggtgttagctatg
ggcctgtactttggaaacggtgtgtacctccagagcagctggaacatattagacgggctg
ctggtgtttgtatcgctggtggacatcctggtgtccatcgcgtcagcaggaggtaatcga
atcttaggcatcctccgtgtccttcgtctgctccgcaccctgcgacctctcagggtgata
agtcgagctccaggtctaaaactggtggtggagactctgatcacatccctcagacctatt
gggaatattgtcctcatctgctgtgcttttttcatcgtttttggaatattaggagtccag
ctgtttaaggggaagttcttctactgtgatgggctcgatgtgactaacatcaccaataaa
agccagtgtctggaggcagggtaccgctgggatcgacggaaatacaactttgacaacctg
ggacaggcgctgatgtcactatttgtgctgtcatgtaaagacggctgggtcagcatcatg
tatgatggcctggatgctgtgggagtggatcagcagccgataaggaacaacaacccatgg
atgctgctgttcttcatctctttcctcctcatcgtcagcttctttgtgctcaacatgttt
gtgggtgtggtggtggaaaactttcacaagtgtcgccagcagcaggaggaggaggaggca
cggctgagggaggagaaacgacagcggcggttggagaagaggaggagaagggcccaggag
aaaccatattacgccgactactccccactgcgtcgatccatccacaccgtgtgcaccagc
cactatctggatctctttatcaccattatcatcttcacaaacctcctcaccatgagcatg
gagcactacaaccagcctaagtacctcgaggagatactcaagtactgcaattacgtcttc
acggtggtttttgtcatcgaggccattctcaagctcatcgctttcggcctgcgtcgcttt
ttcaaagagagatggaaccagctggaccttgccattgtgttgttgtccatcatgggaatc
acgttagaggaaatagacctgaatgcatccctgcccatcaaccccaccatcatacgcatc
atgagagtcctgaggataacacgagtgctgaagctgttgaagatggctacaggaatgaga
gctctgttggacacagtgatgcaagctctgcctcaggtggggaatctgggtctgctcttc
atgttgctgttcttcatctatgcagctctgggagttgagctctttggaaaactggagtgt
tcagacgagaacccatgtgagggtcttagtcgccacgctaccttcgacaactttggcatg
gctttcctcacactcttcagggtgtctaccggggacaactggaatgggattatgaaggac
accctgcgtgagtgtcgcccgcaggaccgccactgcctcacctacctgcccttgatctcc
cccatttacttcgtcaccttcgtcctgacggctcagtttgtgctggtcaacgtggtcgta
gccgtcctgatgaagcacctggaggagagcaacaaggaggcgcagctggaggagatggaa
gagaggaaggagagggaggagatgagggagagggaggagaggagggagagggagagggag
gaggccaaccgtcgcctcagtgctgcatctttgagcggagacctggggccaaacgtggac
gcacctgctcaggtgcaggttgaggatgacgagtgttcccatggcaacctgctgagcatg
ggacgcatgctgtctctccccagcgacagctacgttcagccagtcagatgttcccctcat
cctcctgttggccacgaggcttactccagctacagctactcaggctccatgtcatctctg
ggctccagtggaggcggctctctgctgcaggttccaggagctctgcccgtcataagccac
gcttcactgggatctggacgcagctcaaggccgatgatctgcctcagcacctctcagagc
atcgacagatactccccacacagactgagtccggctgacagcgtagagggatacaggttt
agtcctgctcacagaataaacagacacagacttaactcagctcacagcatagatggatac
aagttcagcccggcccatcggataaacagacacagactcagctctgctcacagtatagat
ggatacaggctgaatcaagaacataagacagagaggcctaaactcatgtccagccacagt
atagacagacatccgtcactcagactgagtcccacccacagtgccagcagacgtccttct
tattggctcagccctgaagacagtttagacagaaacaagctgagtccctcctacgtccca
gagagttcggttctgaggagaccagcgtctttacgcactgcgagcagacagttacggaga
caggaggcagtgcgctctgactctctggatcagagcggttcagctgacgatctggcagag
cctcacctcactgcgtctgctgtctcttccacgccaccacgccagcgatcgtccagtgta
cacacactgaaatatacacacccccagagggtcatctcatgcaggagccacagccggagc
cacagtgaaaccaccggacaagaacatgtacctcctgagcgggccatctgcggctcgcag
ccagaaacagatgacgagaagaggcctgtcagcccgcagagcctgtccagtctgaaggtc
cccggcggtgaatccaccatatcagccccgctctgtagctccagagcggccagtcccggc
cccacctctgaccccggcccccagttagacgacgctgacgaggaagtcagccgtattaac
agttctgttcacactcactcgcacacacaacgccctcccagctcctcacacaaaagcaga
caccttaccccgagccccggggagcacaggagccgcctcagccaatcagtgtccccggtg
tcgggcgggaacaggaagcagaggatgagcccgccgccgggggaggagccagttactatg
gcaacccagctgatggacagcagtgttgagctgagaaggcggactctatcatttgacgcc
acaaccctctctcctaatcagccggaggagagctctgtggacgactga
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integrated database retrieval system
