Sugiyamaella lignohabitans: AWJ20_1518
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Entry
AWJ20_1518 CDS
T05270
Symbol
STH1
Name
(RefSeq) RSC chromatin remodeling complex ATPase subunit STH1
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_1518 (STH1)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_1518 (STH1)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
AWJ20_1518 (STH1)
RSC complex
AWJ20_1518 (STH1)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
AWJ20_1518 (STH1)
SWI/SNF complex
AWJ20_1518 (STH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
ResIII
SnAC
DEAD
QLQ
Motif
Other DBs
NCBI-GeneID:
30033329
NCBI-ProteinID:
XP_018735713
UniProt:
A0A167DSF8
LinkDB
All DBs
Position
A:join(4728767..4728886,4729011..4732964)
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AA seq
1357 aa
AA seq
DB search
MAVATGTPSTVTPVVVPSPTPNTGSIPVPINKEQVRLLLLRWNALKRKGAREDSNPELAE
ITRVLKDISNAQKLYKVREDKIQSLRKDSRIEELKPSTSTSTGDVTGDNASQSSNKLDVL
RAQIKAFQILSRNLDVPAALQSVLVNSVTDDLNDRVQQQVKEEEEQQKAEKQEQDPRSSH
SRFQKSYDRLFKQYEKRLRSVGGKAEVVIRNRLSCRVAELEHLPGNLGTIDTKSIDYTPD
DEISASEDILKLKAVIELKGLRLLTKQKSLRQHIVYSIGAKTDPLAESMMSRSLNRRIKV
HTAQEMRLTEQLELQQRMERERKQRETQLLYVSGVCSHSNEVANSQQQRQFRNFTLSKSI
SQMHSLIEREESKRSERTAKQRLQALRSNDEDAYLKLLDQTKDTRITHLLKQTNSFLDSL
AQAVKVQQQQAGVPMASQADDDSEGNDKIDYYEVAHRIKEQVSKQPSILVGGTLKEYQIK
GLQWMVSLYNNNLNGILADEMGLGKTIQSISLITYLIEVKKQPGPYLVIVPLSTLTNWTL
EFEKWAPAVKKVVYKGPPNARKAQQGIIRMGDFQVLLTTYEYIIKDRPILSKIKWTHMII
DEGHRMKNTNSKLSSTLTQYYSSRHRLILTGTPLQNNLPELWALLNFVLPKIFNSVKTFD
EWFNTPFANTGGQDKMELTEEETLLIIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVIKC
KMSAIQAKLYEQMLKHNILFIGDGGKSKMSVKGLNNRVMQLRKICNHPYVFEEVENIINP
TRGNNDNLWRVAGKFELLDRIFPKFVKTDHRVLMFFQMTQIMDIMEDYLRLRGIQYLRLD
GSTKADERSELLKLFNAPDSPYFCFLLSTRAGGLGLNLQTADTVIIYDTDWNPHQDLQAQ
DRAHRIGQTKEVRILRLITEDSVEEAILGRAHSKLEIDGKVIQAGKFDNKSTSEEQEAFL
RSLLEAEEQRREQKDEDDEMDDDELNEILARSEEERELFNKMDAERNATSEYGKDKERDR
LYGYDELPEEYQQDVTQYLEPAKEKNLGRGARERKTVYYDDGLTEEQWLDAVDTDAAALE
EAIAKKRARMERRQERKSRLAAGLPLEDETSAADDDDDDKVKSNGASRKRKRSRSVKDNS
SEPEDADEEQVNNDFDNDDDDEAEQSRQTKKSNTRNGDSRRVSTKLNGAGADPLAPKQRA
ALTKASLELVEVITSSVEDESGRDRSAIFAELPPKSIYPDYYVLIQEPIALNIIRKNIRN
KVYKTLEEVKSSFDLMFANARTYNEPGSFVYEDADVLDNLISEKYAELKPSLDKVLDSDS
SSSAVNGGVKEEEHENGSVKTSMPTLKIKLSKGREDE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgcgactggcacgccttcaacggtaactcctgtcgtagtgcctagtcctaca
cctaatactggaagtattccagttcctataaataaggaacaggtcaggctgctacttctg
agatggaatgccttgaagagaaagggagcacgcgaggactctaaccctgaattagcagag
atcactcgtgttctcaaagatatttcaaatgctcagaagctatataaagttcgagaagac
aagattcagagcttacgaaaagattctcggatcgaggaactcaaaccttcaacttcgact
tcaactggtgatgttactggtgacaacgcgagtcaatcatctaacaaattagatgttctt
cgtgctcagatcaaagcgttccagattttatcccgtaacttggacgtgccagctgcattg
caaagtgtcttggtaaactcggtgactgatgacttgaatgatagagtacaacaacaagtc
aaggaagaagaagagcaacaaaaggcagagaaacaagaacaagatcctcgttcgtctcat
tctagattccaaaagtcatatgatcgattatttaaacagtatgaaaaacgacttcgttct
gtgggcggcaaggcagaagtggttattcgtaaccgactttcatgtcgagtagccgaactc
gagcatttaccaggtaacttaggtactatcgacaccaaatctattgactacacaccagac
gatgagattagtgctagcgaagacatactcaaactcaaagcggttatcgaactcaagggt
ttacggctattgaccaaacaaaagagtctgcgtcagcatatagtgtatagtattggtgcc
aaaacagatccactagcggagagtatgatgagtaggtctcttaatagacgaatcaaggtg
catactgctcaggagatgagactcacagaacagctggaattacaacagagaatggaacgg
gagcgtaaacaacgagaaacacaactgttatatgtttctggtgtatgtagccattccaat
gaggtggctaactcacagcaacaacgacaattccgcaactttactctgtctaaatcgata
agtcaaatgcatagtctgattgagagagaggaatccaagagatcagaaagaactgcgaaa
caacgtttgcaagcacttagatccaatgatgaagatgcatatcttaaattgctggatcag
accaaggacactcgtattacgcatttgttgaagcagaccaattcgttcttagactcatta
gcacaagctgttaaagttcagcaacagcaggctggcgtgccaatggcatctcaagcagat
gatgactctgaagggaatgataaaatcgactattacgaggttgctcatcgtatcaaggag
caagtttccaagcagccaagtattttggttggtggtacgctgaaagagtatcagatcaag
ggcttacaatggatggtttctctttataacaacaacttgaatggtatcttagccgatgaa
atgggtcttggtaagactatccaatctatctcactgattacgtacttgattgaagtcaag
aaacagcctggtccgtatctcgttattgtgcctctttcaaccttgaccaactggaccttg
gagtttgagaagtgggctcctgctgttaaaaaggtagtgtacaagggaccacccaatgct
aggaaggcccagcaaggaattattagaatgggtgatttccaggtcttgttgacgacatat
gagtacattattaaggaccgtccaattctttcgaagatcaagtggacccatatgattatc
gatgaaggtcatcgtatgaaaaacaccaactctaagcttagttcaactcttacccagtac
tacagttctagacaccgtcttattcttaccggtacacctcttcagaacaatcttcctgag
ttgtgggctctgttgaactttgtcttgccaaagattttcaactctgtgaaaacattcgac
gaatggttcaatacaccatttgctaataccggtggtcaagataagatggagctgactgaa
gaagagactctacttattatcagacgtttgcacaaggtgttaagaccgttcttactgaga
agattaaagaaagatgtcgaaaaggatctaccagacaaggttgaaaaggtcatcaaatgt
aaaatgtcagctatccaagccaaactgtatgaacaaatgctcaagcacaacattttgttc
atcggtgacggtggcaagtcaaagatgtcagtcaagggtcttaataacagagtcatgcag
cttcgtaagatttgtaaccatccttatgtgttcgaagaagttgagaatatcattaatcct
actcgtggcaacaatgataacttgtggagagtagcaggtaaatttgaactgttggacaga
attttcccgaaatttgttaagaccgatcacagagtattgatgttctttcaaatgacgcag
attatggatatcatggaagattacttgagacttcgaggcattcaatatcttcgtttggat
ggtagtaccaaggcagatgagcgttccgaactgctcaagttgtttaatgcacccgattcc
ccatacttttgtttcttgttgagtaccagagcaggtggtctgggtcttaatttgcagact
gctgatacggttatcatctatgatacagattggaatcctcaccaggatttacaagctcag
gatcgtgcacaccgtattggacagaccaaggaagtgcgtattttacgattgatcaccgaa
gactctgttgaagaagcgattcttggaagagcacattcgaagcttgaaattgacggaaag
gtcattcaggctggtaaattcgataacaagtcgacatcagaagagcaagaggcgttctta
cgatcattgctagaagcagaagaacagcgtcgtgagcagaaagatgaagacgacgaaatg
gatgatgacgagcttaacgagatcttggctcgaagtgaggaagaacgtgagttgttcaac
aaaatggatgccgaacgaaatgctactagcgagtatggcaaggacaaagagcgtgatcga
ttgtatggatatgatgaacttcccgaggagtatcaacaagatgtcactcaatatttggaa
cctgcaaaggagaagaatttgggcagaggagctcgtgaaagaaagactgtttactatgac
gacggtcttaccgaggagcaatggcttgatgctgttgataccgatgctgctgctcttgaa
gaggctattgccaagaaaagagctcgtatggagcgtaggcaagaacgcaagagtagattg
gcagctggacttcctcttgaggatgagacttcagctgctgatgacgacgatgacgacaag
gtgaaatctaatggagccagtcgtaaaagaaagcgtagtcgtagtgttaaggataattct
agcgagcctgaagacgccgatgaggagcaggtaaacaatgattttgataatgatgacgat
gatgaagctgaacaaagtcgacagactaagaagtccaatactcgtaacggcgatagtcga
agagtatcaacaaaactcaatggagcaggtgctgacccactagcacctaaacaacgagct
gcacttaccaaagccagtttagagcttgttgaagttatcacgtcatcagtcgaagacgaa
tcaggacgagacaggtcggccatttttgcagaattaccacctaagtccatttatcctgac
tactatgtccttatccaagagcccattgcattgaacatcatccgcaagaacattcggaac
aaagtgtataaaacacttgaagaggtcaaatccagtttcgatctcatgtttgcaaacgct
cgtacttacaacgaaccaggatcgttcgtgtatgaagatgccgatgtcctggataatctt
atttcagaaaagtacgccgaactcaagccgagtctcgacaaagtgcttgacagcgacagc
tctagttcagccgttaatggtggtgtcaaagaagaagagcatgaaaacggctcggtcaaa
acatccatgcctaccctgaaaatcaaactttcaaaaggtcgtgaagacgagtag
DBGET
integrated database retrieval system
