Sugiyamaella lignohabitans: AWJ20_1653
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Entry
AWJ20_1653 CDS
T05270
Symbol
SMC3
Name
(RefSeq) cohesin subunit SMC3
Organism
slb
Sugiyamaella lignohabitans
Brite
Proteoglycans [BR:
slb00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
AWJ20_1653 (SMC3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
zf-C4H2
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
30033479
NCBI-ProteinID:
XP_018735843
UniProt:
A0A167DW74
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Position
A:5053503..5056841
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AA seq
1112 aa
AA seq
DB search
MSAFVEIILDNTDRRFTSIDNAEVKIRRTVGLKKDEYSINSRSITRQEILNLLESAGFSQ
SNPYYIVPQGRITALTNASKTERLKVLKDVAGTEVYDRKKEESTKILEDTERNREKISET
LVQINQRLEELKEEKEELSAYQKFETEKRSLDHVVYNRELEVINSSIERLMESGMDGREA
VATETEKFGLLEDNLKNAEEGITRADEQIQILEREKAELEEDLDEIITSHAKAELKLSEI
QENKAQIKQRRLEREQESAELSEEIKIKESELLEIIPRFDKLKQEEQQLRELVESLEARR
DRLELKRGQNSKFSSKGERDRWLQAQIADVEATIAARNTAISELQLEVVELEKQLHQASE
GVLSQRQGLDSASEMHGSARRLETEAALDKERLLDERKGLWREESRLEIALDNAQQKLDK
AQQRLSGTMSRDNYLGLKAVEEIARELNVKGYYGKLSDVISVSDDFKLAVERTAGSSLFH
VIVDTDETATFLVSELSRRKAGRVTFMPLNRLTPSNHVYPDSNETTPLISRIQYDPKFEP
AIQQTFGNMLVCSTLEVCNQFMHSHRLNTITIDGDRVDSKGVMTGGYHNPKNSRLDALRL
VSAAQEEVNRLNNELIVIKNNITMKDQQITHAMGEATRVANERAQIQSKARAFEETIRTA
VAEELRLKALIAAKKEDLVDRNGNLKSLIEQRTSYVEDLKTPFNNNLSSEEIQELNTIGD
RIRFSRRQYQQASSERSRLGEQRALLESDLQDNLYVRNDQIKTNNIEFLENNGDDAEAVL
IEIQTQVKKLTKEKATMEKKLSQVDHNLEALFKEKNAHAASLAQIEEDQTKLAQHIEQLQ
KNADKDVAKRARLQSRKDILHSKIRALGTLPESVNEFVNMDANQIVERQREVTEQLKKYV
HVNKRAAEQYRDSLEKQTHLIVRERELSEALTSIRELIQTLDRRKDEAINRTFKQVDIAF
SEIFQQLVPDGIGRLVIQRKPATTGNRIDYTGVDIDVSFNSRNNEQQAVSQLSGGQKSLC
ALTLIFAIQRCDPAPFYLFDEIDANLDTQYRTAVAHMLKEQAKDAQYICTTFRPEMLTVA
DKFYGVVYKDKMSTIAPISASDAMSFIESAAQ
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttttgtggaaattatccttgacaataccgataggagatttacatcaatagac
aatgcagaggtcaaaattcgaagaacggttggtctgaagaaagatgaatattccatcaat
agtagaagtatcactcggcaagagattcttaacctgcttgaaagtgctggattctctcaa
tcaaacccttattatattgttcctcaaggtagaattactgcattaacaaatgcgtcgaaa
acagaacgattgaaagttctcaaagatgtagctggtacagaagtatacgatagaaagaag
gaagagtctaccaagattttggaagatacagaaagaaaccgagaaaaaatcagtgagact
ttggttcaaattaaccaacgattagaggagttaaaggaggaaaaggaagagttatctgct
tatcagaagtttgaaactgaaaaacgtagcttggatcatgttgtgtacaaccgagagttg
gaagtaataaacagcagtattgagcgattaatggagagcggtatggatggccgtgaagct
gttgccactgagactgagaaatttggactgctggaagataacctcaaaaacgctgaggaa
ggtatcacccgagcagatgagcagattcagattttagaacgagaaaaagctgagttagaa
gaagatctagatgaaattattacctcgcatgcaaaggctgaactcaaattatctgaaatt
caagaaaacaaagcccaaatcaagcaacgtcgactagagcgcgagcaagagagtgcagaa
ctgtctgaagagatcaaaattaaagagtcagaattgttagagataattccaagatttgac
aaattaaagcaggaagaacaacagcttcgtgagttggtagaatccctggaagctcgccga
gacagactcgagttgaagaggggccaaaactcgaaattttcttcaaagggcgaacgtgat
agatggttacaggctcagatcgctgatgtggaagcaactattgctgctaggaatactgct
attagcgagcttcaattagaggttgttgagcttgaaaagcaactgcatcaggcatcagag
ggtgttctttctcaaaggcagggtttagattcagctagcgagatgcatggctctgcccgg
cgactggagacagaagcagcacttgataaagaacgtttgctagatgaacgtaagggctta
tggcgtgaggagagccgcttagaaattgctttggacaatgctcagcagaagcttgacaaa
gctcaacaacgtctatcaggaactatgagtagggacaactacttaggactcaaggcagtt
gaagaaatcgcccgcgaattgaatgtcaaaggatattacggaaaattgtctgatgttata
tcagtctccgacgactttaagctcgctgttgagcgcacagctggatcaagtctttttcac
gttattgtagatacagatgaaaccgctacttttttggtaagcgagttatctcgccgaaaa
gcaggcagagttacattcatgcctcttaataggttaacaccttccaatcatgtatatccg
gactcgaatgaaacgacaccactcatttctcgtattcagtatgatccaaagtttgagcct
gctattcagcagacatttggtaacatgcttgtgtgctctacactagaggtatgtaaccaa
ttcatgcactcgcacagattgaacacaattactattgatggtgatcgagttgattcgaag
ggtgtaatgacaggaggttaccataaccccaagaactcccggctagatgctttacggctt
gtgtctgctgctcaagaggaagtcaataggcttaacaacgagttgattgtcatcaagaat
aacatcacgatgaaggatcaacaaatcactcatgcaatgggcgaagcaactcgggttgct
aatgaacgcgcccagattcaaagtaaagccagggcttttgaagaaaccattagaacggca
gtggcagaggaattaagactcaaggctttaattgctgctaagaaagaagatttggtggat
agaaatggtaacttgaaatcactgattgagcagcgcacctcttacgttgaagatttgaag
acgcctttcaataataatctttcttcagaggagattcaagaattgaatacgattggtgac
aggatccgcttttcaaggcgtcaataccaacaggcaagctcagaacggtccaggcttggc
gagcagcgtgcactactagaatctgatcttcaagataacttatatgtgcggaatgatcag
atcaagaccaataatattgagttcttagagaacaatggggacgacgcagaagctgtttta
attgagattcaaactcaagtcaaaaagcttacaaaggagaaggccacgatggagaagaaa
ttgtcccaggtggatcataatctagaggccttatttaaggagaagaatgctcatgcagcc
tcattggctcagatagaagaggatcaaacgaaactagcacagcacattgaacagctacag
aaaaatgccgacaaagatgttgccaagagagcacgtctacaatcccgtaaggatattctc
catagcaagatccgagctttaggaaccttaccagaatcggttaatgagtttgtgaatatg
gatgccaatcagatcgtggaacgacagcgcgaagtcacagaacaactcaaaaagtacgtc
cacgtcaacaagcgggcagccgagcaataccgagattcgttagagaaacagacgcatctg
attgttcgagaaagggagttatcagaagctttgacgtcgattagggaactcatccagaca
cttgaccgtcgtaaagacgaagcaatcaaccgaacttttaagcaagttgatattgcattt
tctgaaatatttcaacagcttgtccctgatggaatcgggagattggtcattcaaagaaaa
cctgctacaactggaaatagaatcgattatacaggtgtggacatcgatgtgtctttcaac
agtcgtaacaacgagcagcaagctgttagtcaattatctggtgggcagaagtcgctttgt
gcgctgactttgattttcgctattcagcgttgtgacccagcacctttctatttattcgat
gagattgatgctaatctagacactcaataccgaacggcagttgctcatatgttaaaagaa
caggccaaagatgcacaatatatttgtacaacgttccggcctgagatgcttacagtagct
gacaaattttacggagttgtttacaaagataagatgtctacaattgcacctattagcgcg
agtgatgccatgtcatttattgagagtgccgctcaataa
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