Sugiyamaella lignohabitans: AWJ20_1764
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Entry
AWJ20_1764 CDS
T05270
Symbol
RTF1
Name
(RefSeq) Rtf1p
KO
K15178
RNA polymerase-associated protein RTF1
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_1764 (RTF1)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
AWJ20_1764 (RTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF1153
CorA
DUF4819
Motif
Other DBs
NCBI-GeneID:
30033602
NCBI-ProteinID:
XP_018735948
UniProt:
A0A167DZE0
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Position
A:5363716..5365371
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AA seq
551 aa
AA seq
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MSDLDDDLLALAGAGSDDGGIVSDNEELERRTSGKKRSRNANYDDESDFDEEEEEEDDDE
GEDVTDDDEEATEEEDLHSVKNPYPLEGKYKDEQDKAYLEGLAEVERETILFDRSQEMQK
FQEMEYLAQRARERKQTEKALKKRSKKQSEEGLLATKRSTRDKTGGIPSTKKSKLSELKQ
KRQEKHHRKAGGLEVPYRRGERDSSEDEEDEGYFEDEDEGYGRDGKKREDEVEWAETKPS
KEVTYEDLNKIKFGKTLFSRFCHNPGFEDVVIGTFVRINIGFNREKQANVYRVCQVKEVV
KASKPYTFLGRTVDENIRVAYADSERTFEMGICSDQSITEEEFRSWKSAMDKSGLSVISK
RRVDRKLEELTAFQSRVLTAEEVNQMIQRRQKLSGKNLGANIVLEKSVLQQRRVIALEQN
NFEELEQIDQQIESIDRMLNKSKRRSEIDKLAKVNERNRRANLDEIRKAEVLANETRRKL
TKDANISNPFNRLRTSARIFYRTGSQSESPAPAAATEQNNEESITAVLGNAKHIDLDELI
ASLDIPLEITI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttggacgacgatttgttggctcttgctggagctggatccgatgatggtgga
atagtgtcagataatgaagagcttgaaaggaggactagcggaaagaagcgaagtagaaat
gcgaattacgatgacgaaagcgacttcgatgaagaagaggaagaagaagatgatgacgag
ggagaggatgtcacagatgatgacgaagaggctacagaggaagaagacttacactcggtc
aaaaatccgtatcctcttgagggaaagtacaaagatgaacaggataaagcctacctcgaa
ggattagcagaagttgaaagagaaaccattctgttcgatcgttcacaagaaatgcaaaag
ttccaggagatggagtatttggcccaaagggctcgagagagaaagcagactgaaaaggcg
ttaaagaagcgatctaaaaaacaatctgaagaaggtttactggctacaaagcgatctact
agagataaaacaggtggcatcccgtcgaccaaaaaatcaaaactatcagaattaaagcaa
aaaaggcaagagaagcaccatcgaaaagcaggtggtctagaagttccatatcgccgtggt
gagagggattcgtccgaagacgaagaggatgagggttacttcgaggatgaagacgaagga
tacggccgcgatggaaagaagcgggaggatgaagttgaatgggccgagacaaagccttct
aaggaggtgacatatgaagatctgaacaaaataaagtttggaaagacactattttcaaga
ttctgtcacaatcctggttttgaagatgtagtcattggcacatttgtgaggataaatatt
ggctttaatagggaaaaacaagccaatgtttatcgtgtatgtcaagtcaaggaggttgtc
aaggcgagtaagccatatacgttcctaggaagaactgtcgatgaaaatattcgggttgct
tatgctgacagcgagcgaacgttcgaaatgggtatatgtagcgaccagtccattactgaa
gaagagttccggtcgtggaagtcagctatggacaaatcaggattaagtgttatatccaag
cgaagggtagatcgtaaattggaagagctcactgccttccaatcacgggttttgacggcc
gaggaagtcaaccaaatgattcaaagacgtcaaaagctttctggaaaaaatcttggtgcc
aatattgttcttgaaaagtctgttcttcagcaaaggagggtgattgcactggagcaaaac
aatttcgaagaattggagcaaattgatcagcaaatagagagtattgaccgtatgctcaac
aagtcaaaacgacgctctgagatcgacaagctcgcaaaagtgaatgagagaaatagaaga
gccaatcttgatgaaattcgtaaagcagaagttctcgccaacgagacgcgaaggaaactt
actaaggacgccaatatttcgaaccccttcaatcggttgagaacgtctgcccgtattttc
tatcgaacagggtcccaatctgaatctccagcaccagctgcggccactgaacagaacaac
gaagaatctatcacagctgttttgggaaacgccaaacacattgatctcgatgaacttatt
gcctcacttgatattcctttggaaattacaatttag
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