Sugiyamaella lignohabitans: AWJ20_2220
Help
Entry
AWJ20_2220 CDS
T05270
Name
(RefSeq) RNAPII degradation factor (predicted)
Organism
slb
Sugiyamaella lignohabitans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
Motif
Other DBs
NCBI-GeneID:
30034108
NCBI-ProteinID:
XP_018737092
UniProt:
A0A167EYP5
LinkDB
All DBs
Position
B:717982..720456
Genome browser
AA seq
824 aa
AA seq
DB search
MSSKKYTSALTTLRELFPDWKDDDLLAVLEETSGDIEQSVSLIAEGHVSQWGQVKKKTRE
STRGKSKGPANADGKESNTTSAHRHNGSAASHGHGSSTHGSNNTGTGAPRGQRSERGRSR
APKRVNGSTHTHTNANSTTSSAAATANNNNTSDATSTPAAWETDAAGVPAGSAVAAASIA
ASNASSTSTTDSTAATTNSSTSESAPSAPKTRSWADALSKKSTTAPVAAKRQSQPQQHQQ
QERAAQKPQPSASADIDNTTTTTTTTSSSLPESNTAATSTPAAAATAASTETTAPVSNSA
PTAVPALPVAPQKLSWAAIAKPKEEKKPAPAAPVASTATTNASPASAAASETPVAAATST
ETTTQPEQTEAFTQEPAAETVSEPIPVSIPPGLESKPEPAVPAATSNTASTGAAAAAAPR
RVTQEVPVILPGSVSRTVDRVGVQFGSLDLNEQTPATESASQTAQPAQQQAQAQQQQQQQ
QIASETANSSATSTAPAGIPEQGQTAGAAAAAQPAYYGYGQTQAQTAGSVQQKPYENAYS
QNHYVYPGTHPGSHPGFATGYSVPTDYQSPYGAGVSDQRNSYNNYYYQQQAAAAGQQQPG
LTGNQQQTQSQHNGSLDSSRYGTSAGATGAEAGANSAVAGGAGVAQSSNANSPASVAAGV
YQQPSMNPYYMSPAYAAYYYQTYGYNQQAALAAQYGSPAGPQKGFFNQQQSYYDYRQPGV
GGQVQGQQGQSQQQAQGQQQGQSQGQQQQQSQAQGQTSQAGGLTGISDFLQREDTSKQTP
GSPQQHQAGLPQQPQYPVQQNLYSYAGYGQYSGQQGQRQGWGYN
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaagaaatacacatcggcgttaaccaccttaagggagctatttcctgattgg
aaggacgatgatttactagcagttctcgaagaaacttcaggagacattgaacaaagtgtt
agtctaattgcagagggtcatgtttcacaatggggtcaagtaaagaagaagaccagagag
agtactagaggtaaatcaaagggtcctgctaatgcagacggtaaagagtccaataccacc
agtgcacatcgtcataatggttctgctgccagtcatggtcatggcagcagcactcatggt
tccaataatactggtactggtgctcctagaggtcaaagaagtgaaagaggtcgtagtaga
gctccaaagagagtcaatggaagtactcatactcatactaatgccaattctaccacttct
tctgccgctgctactgctaataataataatacttcagatgctaccagtactcctgctgct
tgggaaactgatgctgctggcgttcctgctggttctgccgttgctgctgcctcgattgct
gctagtaatgcttcatccacttctactactgattctactgctgctaccacaaattccagc
accagcgagtctgctcctagcgctcctaaaacaagatcatgggctgatgctctttctaaa
aaatccactactgctcctgtagcagccaagagacaatcacaaccacaacaacatcaacaa
caagagcgggctgctcaaaagcctcagccatctgcatcggctgatattgacaacaccacc
accactactactactacttcttcttctctaccagaatctaatactgctgctactagtact
cctgctgctgctgccactgctgccagcactgaaactactgctcctgtatccaactcagca
cctactgctgttcctgcattaccagttgcccctcaaaagctttcatgggctgctattgcc
aaaccaaaagaagaaaagaagcctgctcctgctgctcctgtagcctctactgctactacc
aatgcttcacctgcctctgctgctgccagcgaaactcctgttgctgctgccacttccact
gagaccactactcaaccagaacaaactgaagctttcactcaagagcctgctgccgagact
gtatctgagccaatcccagtctccattcctccaggactcgagtccaagcctgaacctgct
gttcctgctgctacttctaacactgcttctactggagctgctgctgccgctgctcctaga
agagtcactcaagaagttccagttatccttcctggttccgtcagtagaactgttgaccgt
gtgggtgttcaatttggaagtcttgatttgaacgagcaaacccctgctactgagtctgct
tctcaaactgctcaacctgctcaacaacaagctcaagctcaacaacaacagcaacaacag
caaattgcttctgagaccgctaactcgtctgctactagcactgctcctgctggcattcct
gaacaaggtcaaactgccggtgccgctgctgctgcccaacctgcatactacggatacgga
caaactcaagctcaaactgctggttcagttcaacaaaaaccttacgaaaacgcttattcg
caaaaccactacgtttatcctggtacccacccaggctctcaccctggttttgctactggc
tactctgtccccactgattatcaatctccttatggagctggtgttagtgaccagagaaac
agttataacaactactactatcagcaacaagcggctgctgctggtcaacaacaacctggt
ttgaccggtaaccaacagcaaactcaatcgcaacacaatggatctcttgattcgtctcgt
tacggaaccagtgctggagctactggtgctgaggccggtgctaactctgcagttgctgga
ggtgctggtgttgcccaatcgtcgaacgctaactctccagcctctgttgccgctggtgtt
taccaacaaccttcgatgaatccatactacatgtcgccagcttacgctgcttactattac
cagacctacggatacaaccaacaggcggctcttgctgcccaatacggctcgcccgctggt
ccccaaaagggattctttaaccagcaacagagctactatgactaccgtcaacctggtgtc
ggcggacaggtgcaaggacaacaaggacaaagccaacagcaagctcaaggtcaacagcaa
ggtcaatcccagggtcaacaacagcagcaatcccaggcccagggtcaaaccagccaagcc
ggcggtttaactggaatctcggacttcttgcaaagagaggacacatccaagcagacccct
ggctcaccccagcaacaccaagccggcctgccccaacaaccccagtaccctgtccaacag
aacctgtacagctacgctggatacggccaatactcgggccaacagggccaacgccaggga
tggggctacaactaa
DBGET
integrated database retrieval system
