Sugiyamaella lignohabitans: AWJ20_2547
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Entry
AWJ20_2547 CDS
T05270
Symbol
NUP57
Name
(RefSeq) FG-nucleoporin NUP57
KO
K14308
nuclear pore complex protein Nup54
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AWJ20_2547 (NUP57)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_2547 (NUP57)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AWJ20_2547 (NUP57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
DUF6872
Motif
Other DBs
NCBI-GeneID:
30034470
NCBI-ProteinID:
XP_018737407
UniProt:
A0A161HGM1
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All DBs
Position
B:1710523..1711719
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AA seq
398 aa
AA seq
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MSTPMFSWSKPSDQLNQSTLGSGVSGAQAGGSLFGTAGGNAAGQPANQGFGSATGSGFGA
GFGAGGTNSFSQQPQQQTQQLLLQPQQQQQQQQQQQQLQNGLGSSMNISFNSQAPAQPRP
QTAANLSPSVVDQLQKIKDSCDPSSANCAFQAYFYNKVPVEQALLYTKPPGQDQAKWDQA
IKNRPDSSSVPVLAVGFSDLQKRVLLQQQQVNAYRLRMHEINNKLNELSTRHDLYTTVKI
SEMKARHSKLVHRTLALAVKIQVLKSRGYVLRPDEEVLKQKFEALNKEIDNPAVFGRINE
VWARMKVLRERARALDQQISVYGNTASSGINSTSASNGTSAVGTSNILDWERDEEQLDKL
SKILKAQQMGISYLAKVLTDDTEQVDSMLSKLEEGVVR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccaatgttttcgtggtcgaaacccagtgaccagttgaaccagtcgacgcta
ggttcgggtgtgtcaggtgcacaggccggtggttcgttatttggtaccgcaggtggaaat
gctgctggccagcctgctaaccagggctttggttcagcaacgggttcgggattcggtgct
ggattcggtgctggtggcacgaattctttctcacaacagcctcaacagcagactcaacag
ttgctgctacagcctcaacaacaacagcagcagcagcagcaacagcaacagctgcagaat
ggactgggttcgtccatgaatatcagcttcaactcacaggctcctgcccaacctcgtcct
cagacggcggcgaatctgtcaccgtcggtggtggaccagctgcaaaagattaaagactcg
tgcgacccatcgagcgcgaattgcgcttttcaggcgtatttttataacaaagtgcctgtt
gaacaggctcttttatacaccaaacccccgggtcaagatcaggccaaatgggaccaagct
atcaagaaccggcccgattcgtcgtctgtaccggtattggcagtaggtttttcggattta
cagaaacgggtactgctacaacaacagcaagtcaatgcttatcgactgagaatgcacgaa
attaataacaagctcaatgaactatccactcgtcacgatctgtatacgacagtgaaaatc
agtgaaatgaaggctcgtcatagcaaacttgtacatcgaactctagcattagcagtgaaa
atccaggttttgaaaagtcgagggtatgttttaaggcctgatgaagaggtgctgaaacag
aagttcgaggctttaaataaagaaatcgataacccagcggtatttggacgcatcaacgaa
gtctgggcacgaatgaaggttctgagagaacgcgctcgcgccctggaccagcagatatcc
gtgtatggcaacaccgcctcgtctggtatcaattccacttctgcatccaatggcacatct
gctgttggcacctctaacatcctcgactgggaacgcgacgaagagcagctcgacaaactg
tccaagatcctcaaagcccagcaaatgggcatctcgtatctggccaaggttctcactgac
gacaccgagcaggtcgactctatgctgtcgaaactcgaagagggtgtcgtcaggtaa
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