Sugiyamaella lignohabitans: AWJ20_3469
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Entry
AWJ20_3469 CDS
T05270
Symbol
RQC1
Name
(RefSeq) Rqc1p
KO
K24970
transcription factor 25
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_3469 (RQC1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AWJ20_3469 (RQC1)
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GFIT
Motif
Pfam:
Tcf25
Na_trans_cytopl
YcaO_C
EndoU_bacteria
Motif
Other DBs
NCBI-GeneID:
30035494
NCBI-ProteinID:
XP_018738302
UniProt:
A0A167FXD2
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Position
B:4298807..4300642
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AA seq
611 aa
AA seq
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MSSRALKKIYRDELTPSPNPDSGMDRDGKGEEEEEEVEDEEEEEMEEKTAKPGQTNPYAL
LNADNEDDNEDDNEADDSTSEVEDNEQQKSPMMFPDDTNKEGIRSSAAAGAKKKTKKKKS
KNKNNLAKKAELGKEVDIDGLISDIEQRTDKMETLPTYIKFFRLDPRELDYEQEFRKLFG
KQALKESQSQASGSNPMRDMTRSSASTAKLLKSWGGRDGRTFPGSTRKLVLGKIKEHHVP
TLKRDILMEELKKSETSDLVSLFKFTHSRDYQEAQMIFEYTRSLGDIQTTVQQVLSKVSY
HVPTLLVLADNRTQTGNLSEAADFLEQALLTFDRGVKSNFSFSSGQCRLPFKYFENRTFY
LVVFEYIKTLMKRGTWATAFAYTKLLWGLDPEEDPYGAGLMIDFFAMSAGNYSYLIELAD
EPFFNRPGTIYSSRPNILFSKAIAHYCQTKGRHTETSSKYLHEAVSKYPWVAADILGYHT
PEEEAYNYDGLFENSVISNATSENVDRLAPGPEQAIYSSLYATQMKGFWDSPETRRWLQE
VCKSVTALQPIKQPYGISLSIVRYVMLSQQTQTFKYIPPEILEGEMWADDPFPPADNLSP
YPERSNQHFNV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagggccttgaaaaaaatatacagggatgaattaacgcccagtcctaatcca
gactccggtatggaccgtgatgggaaaggtgaagaagaggaagaggaagttgaggatgaa
gaagaagaagaaatggaagaaaaaacggccaagcctggtcagaccaatccctatgcgtta
ttgaatgccgacaatgaagacgacaatgaagacgacaacgaggccgacgacagtactagt
gaagtggaagacaacgagcagcagaaaagtcctatgatgtttccggacgatacaaataaa
gaaggaattagatcttctgccgctgctggagctaagaagaagacgaaaaagaagaagagt
aaaaacaaaaacaaccttgccaaaaaagcagagcttgggaaagaagtagacattgatggg
ttaatttcggatattgagcaacgaactgataagatggagactcttccgacgtatataaaa
tttttccgtctggatccccgagaattggactacgagcaagagtttagaaagctattcggc
aaacaagctctcaaggaatcgcagtcacaagccagtggaagcaatcctatgagagatatg
actaggagttcggctagtactgccaagttactcaagtcttggggtggccgcgatggtcgc
acatttccaggtagtactagaaaacttgtacttggaaagatcaaagagcatcatgttcct
actctaaagagggatattcttatggaagagttgaaaaaatccgaaacttctgatttggta
tctctattcaagttcacgcacagtagggattatcaggaagcacagatgattttcgagtac
acacgatcattaggcgatatccaaacaacagtgcagcaggtattatcaaaggtatcttat
catgtgcctacacttttggtgctagcagacaaccggactcaaacaggaaatctgagtgaa
gcagcagacttcttagagcaagcacttttaactttcgaccgcggggtgaagtcaaatttc
agcttcagttcgggacaatgtaggctcccgttcaaatatttcgaaaatcgaacattctat
ttggttgtctttgagtacataaaaacgttgatgaagaggggtacatgggctacagcgttt
gcctacacgaaactgctctggggtttggaccccgaagaggacccatatggcgccgggttg
atgattgacttcttcgctatgagtgctggaaactattcgtatttgattgaacttgcggat
gagccgttctttaacagacctggaacaatctattccagtcgaccgaatatactgttttct
aaagcaattgcacactattgtcagacaaaaggaaggcatactgagacaagttcgaaatat
ctacatgaggcagtttcaaaatatccatgggttgctgcagatattttgggctaccatact
ccagaagaggaagcatacaactacgatggcctttttgagaactcggtaatctcaaatgcc
acctcagagaacgtagaccggcttgcgccaggccccgaacaggcaatctacagtagttta
tatgctactcaaatgaaaggtttttgggattctcctgaaacacgcaggtggctccaggaa
gtctgcaagtcagtgacagctcttcaacccattaagcagccatatggaatctccctttct
attgtgcgttacgtcatgctttcccagcaaactcagacttttaaatacattcccccggag
atacttgagggcgaaatgtgggccgacgatccattccctccggctgataatctatctcca
tatcctgaacggtctaaccagcatttcaacgtatga
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