Sugiyamaella lignohabitans: AWJ20_3650
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Entry
AWJ20_3650 CDS
T05270
Symbol
VPS41
Name
(RefSeq) Vps41p
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04138
Autophagy - yeast
slb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
AWJ20_3650 (VPS41)
04148 Efferocytosis
AWJ20_3650 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_3650 (VPS41)
Membrane trafficking [BR:
slb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
AWJ20_3650 (VPS41)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
RNase_PH_C
Vps39_1
WD40_like
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
30035696
NCBI-ProteinID:
XP_018738477
UniProt:
A0A161HI92
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Position
B:4787680..4790634
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AA seq
984 aa
AA seq
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MTMSEGIEDFAHNGDDLAQQGNREIPDLIAPEGGFSEETTHGDAPQTGHKEDLNEEGGAN
GNEQNNHDEEDNADDDDESSGNGESEDEDENESSASEGDSESDEDEEEPKLKYSRLSDLK
PPVFSNNTVSTFLASETVIVFATHSGIIHMFNPDMSSIRSFRAHRASILSLSTDGTYLAS
GSLDGTVVIVSIMNQKDTSYADFKRPIHAVALDPNYKSTRAYVSAGTAGSVIHSEKNWFG
SRSDTVLYTSEDPIISLNWVNNLIIWMNEDGIILYSTHRKSILRRIDRPANAPRADLYKP
RICFPDSNRIFIAWVDHIWNIKITTGSEAKPKPTIGAPSFLSSSASVLSPHADEIIEVEN
VHKLPWLLSGILPFKDAVMILVYAKADGQEASVSSRKRPTPDPPELKLIDWLTGEETYAD
VLSMRGYERLGLDDYHLGHFHGNRSMPDKYFIVSGTDAIVAEERTMLDRLNWLDEKHMYK
KSWEMSASLVDPISRIAIGIKHVESLIDKEKWGEAAAFLKIILSQPSIDKSVLREEWDRW
GWIFVNSNHISELAQVLPIDDELEIKEDLYDSIINYCLDNDRKTLVSLIYNWPPSLYDYN
LLKNQLEDLINESETSSSINQMRMALADLYTRTNDPLSALQHLLALHHATVIDHISKYHL
LPQIHAMIPQVFIYNLTDEELENAPLEVIRDKTKHTINLFVEGRHQLEPKVIIRALSGNN
KLDVMLFLYLEELTIKDSFISREFANLQIKLYAEFDRRKLMGFLNRNSHYNLTEALKVCD
QNNYTPELVYLLGKVGQHQRALRLIIEKIGDPEQALEFAKSQNDQDLWNDLIHHSLKHPL
FIKVLLEKGNGSIDPVQLIRDIPPGTSIPGLKEALLNLFRDKEMLQSLNMGALDIIKDEG
KSYSQHLRSIRLKGDSVDFNTEHPDLDLSVPYVLTPSGEIKSEEELIGRKIPYIGDSDQE
SDRPRWSVAYKVRRLKHILDYLHF
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgagcgaaggaattgaggattttgctcataatggagacgatttggctcaacag
ggaaatagagaaatccccgacttaatcgctccggaaggaggattctcggaagaaacgacg
catggtgacgcgccccaaactgggcacaaggaagatctaaatgaagagggtggagccaat
ggtaatgaacagaataatcatgatgaagaagataacgcagacgatgacgatgaatctagt
ggaaatggagaatccgaagatgaggatgagaatgaaagctcagcatcggaaggagactct
gaatcagatgaagatgaggaagaacccaagctaaagtactcacggctatcggatttgaag
ccacctgtgttctcaaataatacggtatctacatttttggcgagcgaaacggttatagtc
tttgccacacattcagggataattcacatgtttaatcctgatatgagctctatcagatcg
tttcgtgcacaccgagcgtctatattgtctttatctactgatggcacatatctagcatcc
gggtctcttgatggtacagttgttatagtatctattatgaatcaaaaagatacatcctat
gctgacttcaaacgtccaattcacgcggtcgctttggatccaaattataagtccactcga
gcatatgtttcggcaggaacggcaggaagtgttattcatagcgaaaagaactggtttgga
agcagatcagatactgttctatatacctcggaagatccaataatatccttgaactgggtg
aataatctaattatatggatgaatgaggatggaattatattatattctacacacagaaag
tctatcttaaggcgtatagaccgccctgccaatgccccccgtgctgacctatacaaacca
cgaatctgctttccagactcgaatagaatcttcatagcatgggtggatcatatatggaat
atcaaaataaccacgggtagcgaagcaaagccaaagcccactataggagcaccatcgttt
ctttcatctagtgcgtcggttttgtcaccccatgctgacgaaattatagaggttgaaaat
gtacacaaactaccttggctcctaagcggtatattaccatttaaagacgcagtaatgata
ttggtgtacgctaaagcagatggtcaagaggcgtccgtttcctctcggaagcgaccaact
cccgatccacctgagttaaaactcatagactggttgacaggagaagaaacttatgcagat
gttctatctatgcgagggtatgagcgactaggcttagatgattatcacctgggtcatttt
catggaaatagatccatgcctgataaatattttattgtcagtggtacagacgcaatagtt
gctgaagagcggacgatgctggatagattgaactggcttgacgaaaagcatatgtacaag
aaaagttgggagatgagcgccagcttagtggatccgataagtcgaattgctataggaatc
aaacatgttgaatcattaatcgacaaagaaaaatggggcgaagcagctgcatttcttaaa
ataattctgtcacagccgtcaattgacaagtcagtactgagggaagagtgggatagatgg
ggatggatatttgtgaactccaatcatattagcgaattagctcaggttttgcctattgac
gatgaactagagatcaaagaggacttgtacgatagcatcattaactattgtctggacaat
gacagaaaaactcttgtcagtttgatttataactggcccccttcactttacgattacaat
ttgctaaagaatcaactagaggatcttattaacgaatctgagacctcaagctcgataaac
caaatgcgaatggccttagccgacctttacacaaggacaaatgacccattgtcagccctt
cagcacttgctagctctacatcatgccacggtgatagaccatatctcaaaatatcatttg
ctaccacagatccacgcaatgattccccaagtcttcatatataacctcacggatgaggag
ttagagaatgctccgttagaagtaatccgcgacaagacgaaacatacgattaatctgttt
gtggaaggaagacatcagcttgaacccaaggttattattcgtgcgttgtcgggtaataat
aagctggatgtcatgctatttttatatttggaagaactcactataaaggactcgtttatt
tctagagaatttgccaacctgcaaattaaactgtatgctgagtttgatcgcaggaagctg
atggggtttcttaatcgcaacagtcactataacctgacagaggcgctcaaagtttgcgat
caaaacaattatacaccagaactggtttatctgctgggaaaagtgggtcaacatcaaaga
gcattaagactgattatagaaaaaataggagatccagagcaggcactcgaatttgccaaa
tcacagaatgaccaggatctttggaatgatctgatccaccacagtttgaagcatccttta
ttcattaaagttctgcttgagaagggaaatggatctatagatcctgttcagcttattcgt
gacataccaccagggactagcatacctggtttgaaggaggctctacttaacctttttagg
gataaagagatgttacaatccttaaatatgggggctctggatatcatcaaggatgaagga
aagagctactcgcagcatctgaggtcgatacgattaaaaggggactctgttgactttaac
acagaacatccagaccttgatttatctgtaccatatgtgctaacgccaagtggagaaatc
aaaagtgaggaggaattgataggtcgtaagatcccatacataggcgatagtgatcaagaa
agtgaccgtcccaggtggtctgttgcatacaaagtgcgtcggttaaagcatatattggac
tatctgcacttttag
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