Sugiyamaella lignohabitans: AWJ20_4642
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Entry
AWJ20_4642 CDS
T05270
Symbol
SWI1
Name
(RefSeq) Swi1p
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_4642 (SWI1)
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_4642 (SWI1)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
AWJ20_4642 (SWI1)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
AWJ20_4642 (SWI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Peptidase_S26
Motif
Other DBs
NCBI-GeneID:
30036797
NCBI-ProteinID:
XP_018736176
UniProt:
A0A167E6C6
LinkDB
All DBs
Position
D:126168..130211
Genome browser
AA seq
1347 aa
AA seq
DB search
MDPSSPATDVLQSQQGTIQPSALYSPSLFSNMSPQMENASPALSNSGANSGGNPTNANNS
NISMNSPFMGGISQGRSHSDAASVSPHQRPTPLPAQLLQEVHSGSNSPMIGQQQGFQGQS
QQQQQQANQMQNAGGRLSTGTQPDNGLGSDISQQFNGGNDLGLMYQQQMLGQQQQQTNQN
QNQNRMFPNQNQASNQNQNQGLNQNQNSNQNLPLNFNPNQGQNQNQHGPGSGPNQMPGQV
PGQIPPGQVPGQGGLGNQGFLSTLTPAQLQPIRNQLRLLSPQNQEEFIRRLGMLPPQNLI
QAIQQLASQQQKMAAAQNSRNQAQARNQMNQRQPNQQLNQLNNQQNQPNVPPGQQNQFQF
VMQQNRQKSPQVNVNQPSQIPPNQKYPAGGPSGPMGPNNSGTSGPGGLNMSSAAASTMSK
ADQFVKSLFEFMQRRGTPINSFPTVGESRVHPFALYATVMKFGGSAKVTRAQQWPNVTQA
LGYMPSMSEEVSRIYNNILRPFEEFLLTSQLRNKGLKANLPGQAGQVPMGQVPSPSPAQG
PIKGPGMVPGQVAGPGSNQDSNQGPNVPQTPFGQQAQPSPQVPQSQMPMSMIPMQMGQTP
QTQIQQQQPPSGLRQSATPQPQTKARQTSQSRGKQTASPIPVHMPGPMQSPAVGGSPEVQ
AKLTPRRTPSSRKSSTASSPALVPVPALPAASPTPIIKPKHFVPHENRKYAPKKRLVEKH
GGYDIRVLAGIGREIENIRSDFPFTHELGTFDVHAITMAVNSTIAGEVRQALDKLMVITA
DPRCYFSLVESPGLLTGLAECGLVITKGLASSKPDGKALATTKHYDVNDSLFGEGVKSNI
DAVFESYKSKLGKEDVDLVIDVDTLTGVEVGRVEDDKPTEKIQEDDISVHKKAEGQESKD
TINEKASEQDGLKPFGFTNYLTLLKKTSSENEELEFDYKTPEIDQFWVTASVDRLLSITT
ILRNLSFVDQNRSILINEPTSREFLFGLLYSLAENANLLPNSKQTLDLMKDLVTIFSNLA
PVLILDSAKDALVLLLFILAFTPTPIPLTTSKDGIVFGRYTPVVHRYLPYAVDILAKVLP
RDPPNRDLFESIFLGTCTNFEYLQLLQRYFNGRPADPYELMTCAFGLVISTVPHDDLSVI
PRGLELARPLLHQSLLVAEMLAEMIKFEKPTRSNTNGTVDADEDNDIEMSESDKSFGKEK
EQNNLSDFLKEFKEKKANYNLAYEWLSASDGFGHALLRAACALGAVVGNGRARDEERNPF
ARITQRSITVLRILGKKAMEYDSQDGALTGSEKAIVQLPSGVLPTIEALLGAMLASEMDK
YVVGQICRFCDEGNEHLIKASSSLERP
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctagtccagctacggacgtacttcagtctcaacagggaactatccagcca
tcagctttgtattcgccaagcttatttagcaatatgagtccacagatggaaaatgcttct
cctgctttgtccaactctggtgccaattctggtggaaatccaacaaatgctaacaattct
aacattagtatgaatagcccgtttatgggtggtatttctcaaggaagatctcatagcgat
gcagcaagtgtgtcacctcatcagagaccgactccattaccagctcaactgctacaggaa
gtacatagtggctcgaactctccaatgattggccaacaacagggtttccaaggacagtcg
caacagcagcaacagcaggctaatcagatgcaaaatgctggtggaagattatcaactgga
acccagcctgataacgggttggggtctgatatatctcagcaatttaatggtggaaatgat
ctgggccttatgtatcaacagcaaatgttgggacaacaacagcagcagacaaatcagaat
cagaatcaaaatcgaatgttcccaaaccaaaaccaggcctcgaatcagaaccagaaccag
ggtctcaatcaaaatcaaaattcaaatcaaaacttgcctctcaatttcaaccccaaccag
ggccagaaccaaaatcaacatggccctggaagtggtcctaatcagatgcctggtcaagtt
ccggggcaaattcctcctggacaagtgcctggtcaaggaggacttggcaaccaaggtttc
ttgagtacattgacacctgctcaattacagccgatacgtaatcagttacggttattaagt
cctcagaatcaagaagagttcattcgacgtttaggcatgttaccacctcagaacttgata
caagcaattcagcaattggcttctcagcaacagaagatggctgctgctcaaaacagccga
aatcaggctcaagctcgtaatcaaatgaaccagcgacaaccaaatcaacaactgaaccaa
ctcaataaccagcaaaatcaaccgaatgtacctcccggtcaacagaaccaattccaattt
gtcatgcaacagaaccgccagaaatctccacaggtaaatgtaaaccaaccatcgcaaatc
ccaccaaatcaaaagtatccagccggaggtccaagcggtcctatggggcccaataatagt
ggcacctcgggtcctggcggtttgaacatgtcgtcagcagcagcaagcaccatgtccaag
gcagaccagtttgtcaaatctttgtttgagtttatgcaacgaagaggcactccaatcaac
tcatttccaacagttggtgaaagcagagtacatccttttgccctgtatgctacagtaatg
aaatttggaggatctgccaaagtcactcgtgctcagcaatggccaaatgttacacaggct
ctcggctatatgccgtcaatgagtgaagaggtgtctagaatttataataatattcttcga
ccatttgaggaatttttattaacctctcagttaagaaacaaaggactgaaagccaatctc
ccaggacaagcaggtcaagtacctatgggtcaggttccgagtcccagccctgctcagggt
cctattaagggtccgggtatggttccaggtcaagtggcgggccctggttcaaatcaagac
tctaaccagggtcccaacgtcccacaaacaccctttggacagcaagcgcaaccttcgcca
caggtaccacaatctcaaatgcccatgtccatgatccctatgcagatggggcaaactccc
cagacgcaaatccagcaacaacaaccgcccagtggactgcgtcaatcagctactccacaa
ccccaaacaaaggctagacaaacttcgcagtcaagaggcaaacaaacggcatctccaatt
ccagttcatatgcccggtccaatgcaatctccagcggtgggtggatctcctgaagtacag
gcaaaactaacaccaaggagaactcccagttctcgaaagtcatctactgcatcgtcacct
gcgttagtccctgttcctgctcttcctgctgcatcacccactccaatcattaagccaaag
cattttgtcccccatgagaataggaagtatgccccaaagaagagacttgttgagaaacat
ggcgggtatgatatccgagtattggctggtattggtcgggaaatcgagaatattaggagt
gactttccgttcactcatgaattaggaacttttgatgttcatgctatcactatggccgtg
aattcgacgatagccggtgaggttagacaggctctagataaactgatggtaatcactgca
gatccacgatgttattttagcttggtcgagtcccctggtctactcacaggcctggccgaa
tgtggtttagtcattaccaagggccttgcttctagtaaacccgatggaaaagcattggcg
actacgaaacactatgacgttaacgatagcttatttggagaaggggtgaaaagcaacatt
gatgcagtgtttgaaagctacaagagcaaactaggaaaggaagatgttgatttggttata
gacgtggatactttaactggtgttgaggtgggacgagtcgaagacgataagccgactgag
aaaattcaagaagatgatatttcggttcataagaaggccgaaggccaagaaagtaaagac
acaattaatgaaaaagcttctgaacaggatggccttaaacctttcggattcaccaactat
ttgacgctactcaagaagaccagctctgaaaacgaagagcttgagttcgactacaagact
ccagaaatcgatcagttttgggtaacagccagcgttgaccgacttttaagcatcaccact
attcttcgaaacctgtcatttgttgatcagaaccgatctattttgataaacgaaccaact
agtagggaatttctatttggtttgttgtattcattggcagaaaatgctaatttgctacca
aattccaagcagactttggaccttatgaaagatttggtcacaatattctcaaatttggca
cccgtgcttattcttgactctgcaaaggatgcattggttttgttgttatttattcttgct
tttacacctacccctattccactaacgacatcaaaggatggtattgtattcggcaggtat
acccctgtcgtccaccgttatctcccatacgcagtagacattctcgccaaggtgcttccc
agagatccgcctaatagagacttgttcgaatcaatatttttaggcacttgcacgaatttt
gaatacttgcaactgttacaacggtactttaatggccgtcctgctgacccatatgaatta
atgacttgtgcttttggtctagttatcagtacagtgcctcacgatgatcttagtgttatt
ccccgaggattagagctggccaggccattactccaccagagtctgttagtggcagaaatg
ctagctgaaatgatcaagtttgaaaagccaactcgttctaatacaaatggaactgttgat
gctgatgaggacaatgatattgaaatgtcagaatctgataaatcctttggaaaggagaaa
gagcaaaataatttaagcgatttcttgaaagagttcaaagagaaaaaggccaactacaat
ctagcttacgagtggctaagcgctagtgacggttttggacatgctcttctccgtgctgcc
tgtgcgcttggtgctgttgttggcaacggtcgtgccagggatgaagaaagaaatccgttt
gcgagaattactcaacgtagtatcactgtactacgaattcttggcaaaaaagcaatggag
tatgactctcaggacggtgcgcttactggttcagaaaaggcgatagttcaactaccttca
ggcgtattacctactattgaagctctacttggtgccatgctggccagtgaaatggacaaa
tatgtagttggccaaatttgtagattttgtgacgaaggaaacgaacatttaatcaaggcg
agcagttcattggaacgaccatga
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integrated database retrieval system
