Sugiyamaella lignohabitans: AWJ20_4725
Help
Entry
AWJ20_4725 CDS
T05270
Symbol
NCL1
Name
(RefSeq) Ncl1p
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_4725 (NCL1)
Enzymes [BR:
slb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
AWJ20_4725 (NCL1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
AWJ20_4725 (NCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
FtsJ
Nop14
Motif
Other DBs
NCBI-GeneID:
30036888
NCBI-ProteinID:
XP_018736255
UniProt:
A0A167E8P3
LinkDB
All DBs
Position
D:complement(364114..365994)
Genome browser
AA seq
626 aa
AA seq
DB search
MGRKAKNKQPAPPSLDEFHEGKKRKGHKSAGSSSSSSKKHKPNGTNGTTEHKSKRSSKSK
TSAPIDKEEIEKTKKSLFENSDEEEDDDVVGSELDDDEFYDSDEDRQAKPMFSDDDEDDE
ILEQMNKKAAATFGLEDSEDEEDDDEDEEENDEFDVDEEDEDDDEDDEDGEDDSGKYATE
EAPKAHVLPSEQEKEIETQHPTDLHALRTRILEVVKVLEDFKTLAEEGRSRSEYTDQLLD
DIAAYYGYSRYLAEKLFNLFSPAEAIEFFEANEVARPVTIRTNTLKTRRRDLAQALINRG
VNLQPIGKWTKVGLQVFESQVPIGATPEYLAGHYILQAASSFLPVMALDPQENERVLDMA
SAPGGKTTFISAMMKNTGCVFANDSNKSRTKSLIANIHRLGCSNTIVCNYDAREFPKVIG
GFDRVLLDAPCSGTGVIAKDPAVKTSRTEKDFIQLPHLQKQLLLSAIDSVDASSKTGGVI
VYSTCSVMVEENEAVVDYVLRKRPNVKLVETHLEIGKEGFTNFRGKKFDPSVKLTRRYYP
HTYNVDGFYVAKFQKTSGSFHDNSKAGAREKERAIREDEDAEPLIHGDFAEFNDPEDSAL
IEQTRRRSMKKKGLNPNAHKPKPAKN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaagccaagaataagcaacccgctcctccctcattagatgagtttcatgag
ggtaagaagcgtaagggacacaaatcagccggttcgagctcgtcttcctcgaagaaacat
aagcctaatggtactaatggcaccactgaacacaaaagtaaaagaagctcaaaatcgaaa
acttctgctcctattgataaagaggaaattgaaaagaccaagaagagtctgtttgagaac
tctgatgaggaggaagatgacgatgtggtaggaagtgagctagatgatgatgaattctat
gattcagacgaagaccgtcaagctaaaccaatgttcagtgatgacgatgaagatgacgag
attcttgaacaaatgaataagaaagccgctgctactttcggtttagaagatagtgaagac
gaagaggacgatgacgaggatgaagaggagaatgacgagtttgatgtcgatgaggaagac
gaggacgatgacgaagatgacgaagatggagaagatgatagtggcaaatatgccactgaa
gaagctcctaaagcacatgttctgccttctgaacaagaaaaagagatagaaacacaacat
ccaacagacttgcacgcattacgaacccgtattctcgaagttgtcaaggttcttgaagat
ttcaagaccctggctgaagaaggccgtagcagatctgaatataccgaccagctgttagac
gatattgccgcttactacggatattcacgttatttggctgaaaagctgtttaatctgttt
tcaccagctgaagctattgagttcttcgaggccaacgaagtagccagaccagttactatt
cgtaccaacaccttgaaaacaagaagaagagaccttgctcaggctcttattaacagagga
gtcaaccttcaacccattggtaaatggactaaggtcggtttacaagtgttcgagtctcaa
gtgcctattggagccaccccagaataccttgctggacactatattcttcaagccgcatct
tctttcttaccagtcatggccttggatccacaggagaatgagcgggtgctagatatggcc
tcggctcccggtggtaaaacgacattcatttctgccatgatgaaaaacaccggttgtgtg
tttgccaacgactctaacaaatcgagaaccaagtctctgattgccaacatccaccgtctt
ggctgttccaacaccattgtatgtaactacgatgctcgtgagttccctaaagtcattggt
ggattcgacagagtgctgttggatgctccatgttcaggtactggtgttattgccaaggac
ccagctgtcaagaccagtagaaccgagaaagatttcattcaactgccacatctccagaaa
caactgcttctgtcggccatagactctgtggatgccagttcaaagaccggaggtgtgatt
gtatactcgacctgttcggtcatggttgaagagaacgaggctgttgttgactatgttctc
cgtaaacgacccaacgtcaagcttgttgagactcatctggagatcggaaaagaagggttc
acgaatttccgaggcaagaagtttgatccttcagtcaaactgacccgaagatactaccct
cacacatacaatgtcgacggattctacgtggccaaattccagaagacctcaggttcgttc
cacgacaacagcaaggctggtgccagagaaaaggaacgagccatccgcgaagatgaggat
gctgagccactcatccacggcgactttgccgagttcaacgaccccgaagactctgccctc
atcgagcaaactagacgtcgctccatgaaaaagaagggtctcaaccccaatgcacacaaa
cccaagcctgccaagaactaa
DBGET
integrated database retrieval system
