KEGG   Sugiyamaella lignohabitans: AWJ20_4794
Entry
AWJ20_4794        CDS       T05270                                 
Symbol
TFB3
Name
(RefSeq) TFIIH/NER complex subunit TFB3
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03022  Basal transcription factors
slb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AWJ20_4794 (TFB3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AWJ20_4794 (TFB3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slb03021]
    AWJ20_4794 (TFB3)
   03400 DNA repair and recombination proteins [BR:slb03400]
    AWJ20_4794 (TFB3)
Transcription machinery [BR:slb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AWJ20_4794 (TFB3)
DNA repair and recombination proteins [BR:slb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AWJ20_4794 (TFB3)
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-RING_UBOX zf-RING_16 TRAF3_RING zf-C3HC4_3
Other DBs
NCBI-GeneID: 30036964
NCBI-ProteinID: XP_018736323
UniProt: A0A167EAS1
LinkDB
Position
D:569415..570353
AA seq 312 aa
MCPICKSSRYLNPDMRFLVNPECYHKICESCVDRIFSVGPAQCPYAGCEKILRKNKFKTQ
VFEDLGVEREVDIRARVSRTFNKRQQDFDSLDDYNDYLEEVENIIFNLVNGVDVEATESK
LQAYEQANRNIILANSLRQKQEDEQMEELQSLETQRRRKAQLLALQAEEDERRIKEQTEK
ELVRQLATGEGDAAAIMKNVSNMALKRSSARRRQLEEELRQPLSIPLRLRGARSATPGNA
TPFTPFNGDRQQEYLFTVNDEYFDPLMNDVANNPQYRASGFSVKGSFRQALVSAFFGIGC
DVQHEKAAPLAV
NT seq 939 nt   +upstreamnt  +downstreamnt
atgtgtccgatatgcaaatcgtcgagatacttgaatccagatatgaggttcctagtgaat
cccgagtgctatcacaaaatctgtgagagttgtgtagaccggatattctcggtgggtcca
gcccagtgtccgtatgctggatgtgagaagattcttcgaaagaacaagttcaagacacag
gtgttcgaggatttgggtgtagaacgagaagtcgacatccgggcacgagtcagcagaact
tttaataagagacaacaggattttgactcactggacgattacaatgactatctagaagaa
gtggaaaacatcatattcaacctcgtcaacggagtggatgttgaagccacagagtctaaa
ctacaagcatatgaacaagccaacagaaacattatccttgccaattcgctacggcagaaa
caggaagacgaacagatggaagaattacagagtttagagacccagagacgtcgtaaagcg
caattgttagcattacaagcagaggaggatgagagaagaatcaaagaacagactgagaag
gagcttgtacggcaactggcgactggtgaaggagatgcagctgcgatcatgaaaaacgtg
tccaacatggcattgaaacggtctagtgcgagaagacgtcaactcgaggaggaactcaga
cagccattgtccattccattgagactgcgaggagctcgtagcgcgactcctggcaatgct
actccattcaccccattcaacggcgatagacagcaggaataccttttcacagtcaacgac
gagtacttcgatcctctcatgaacgacgtcgccaacaacccacagtaccgtgcgtcaggc
ttctccgtcaaaggctcgttccgccaggctcttgtcagcgcttttttcggcatcggctgc
gatgttcagcatgagaaggccgctccgctggcagtgtag

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