Sugiyamaella lignohabitans: AWJ20_4794
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Entry
AWJ20_4794 CDS
T05270
Symbol
TFB3
Name
(RefSeq) TFIIH/NER complex subunit TFB3
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03022
Basal transcription factors
slb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AWJ20_4794 (TFB3)
09124 Replication and repair
03420 Nucleotide excision repair
AWJ20_4794 (TFB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_4794 (TFB3)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_4794 (TFB3)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AWJ20_4794 (TFB3)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AWJ20_4794 (TFB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-RING_16
TRAF3_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
30036964
NCBI-ProteinID:
XP_018736323
UniProt:
A0A167EAS1
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All DBs
Position
D:569415..570353
Genome browser
AA seq
312 aa
AA seq
DB search
MCPICKSSRYLNPDMRFLVNPECYHKICESCVDRIFSVGPAQCPYAGCEKILRKNKFKTQ
VFEDLGVEREVDIRARVSRTFNKRQQDFDSLDDYNDYLEEVENIIFNLVNGVDVEATESK
LQAYEQANRNIILANSLRQKQEDEQMEELQSLETQRRRKAQLLALQAEEDERRIKEQTEK
ELVRQLATGEGDAAAIMKNVSNMALKRSSARRRQLEEELRQPLSIPLRLRGARSATPGNA
TPFTPFNGDRQQEYLFTVNDEYFDPLMNDVANNPQYRASGFSVKGSFRQALVSAFFGIGC
DVQHEKAAPLAV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccgatatgcaaatcgtcgagatacttgaatccagatatgaggttcctagtgaat
cccgagtgctatcacaaaatctgtgagagttgtgtagaccggatattctcggtgggtcca
gcccagtgtccgtatgctggatgtgagaagattcttcgaaagaacaagttcaagacacag
gtgttcgaggatttgggtgtagaacgagaagtcgacatccgggcacgagtcagcagaact
tttaataagagacaacaggattttgactcactggacgattacaatgactatctagaagaa
gtggaaaacatcatattcaacctcgtcaacggagtggatgttgaagccacagagtctaaa
ctacaagcatatgaacaagccaacagaaacattatccttgccaattcgctacggcagaaa
caggaagacgaacagatggaagaattacagagtttagagacccagagacgtcgtaaagcg
caattgttagcattacaagcagaggaggatgagagaagaatcaaagaacagactgagaag
gagcttgtacggcaactggcgactggtgaaggagatgcagctgcgatcatgaaaaacgtg
tccaacatggcattgaaacggtctagtgcgagaagacgtcaactcgaggaggaactcaga
cagccattgtccattccattgagactgcgaggagctcgtagcgcgactcctggcaatgct
actccattcaccccattcaacggcgatagacagcaggaataccttttcacagtcaacgac
gagtacttcgatcctctcatgaacgacgtcgccaacaacccacagtaccgtgcgtcaggc
ttctccgtcaaaggctcgttccgccaggctcttgtcagcgcttttttcggcatcggctgc
gatgttcagcatgagaaggccgctccgctggcagtgtag
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