Sugiyamaella lignohabitans: AWJ20_4827
Help
Entry
AWJ20_4827 CDS
T05270
Symbol
VPS53
Name
(RefSeq) Vps53p
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_4827 (VPS53)
Membrane trafficking [BR:
slb04131
]
Protein recycling
Others
EARP complex
AWJ20_4827 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
AWJ20_4827 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
EXOC6_Sec15_N
Syndetin_C
COG3_N
Sec8_N
OSCP
RPW8
APG6_N
COG4_N
Spectrin
Motif
Other DBs
NCBI-GeneID:
30037001
NCBI-ProteinID:
XP_018736353
UniProt:
A0A167EBN4
LinkDB
All DBs
Position
D:663078..665963
Genome browser
AA seq
961 aa
AA seq
DB search
MASFGVANGHSGGSGLGGEDDDPLSLPNYSPVDHLNVLFPTSANVQRVGDIRDLAQLYGQ
SLESKLINGRRTSGSTGSSSIEAVSKTLEEVRSLTDQIDSLRTQAASTDQAITAMTLDIK
KLDNTKANLIQSITVLKRLQMLTTAYNQLSSLVARRQYKEMSQTLPAVMELMAHFRQFRS
ISQIATLSKQVSDIQVRISDQIFDDFATVIEHKPGSRTVAGSAGVSGTGTPVLNGSSTGF
SGSGAGSGTGSATQTGAPASIVDISATLADACVVLDSLPGSTARDRLISWFCNVQLKEYR
TIFRSSDEAGSLENISRRYSYLKRLLKTHSDEYARYFVPSWNVTEELCKRFCATTREDIQ
GLLSQVSSTQTNPKESDVQLLLNSLNETLEFEQYLEKKFKYMNPRPASSSSTSSSEPFKF
ANSVSIAFQPHLNIWIQFQDRALAQKFQEFRAVSRHSQSQGTRSQTGSDDNDQENKDDDD
PTVLPSSADLFIFYRSVLTQTAKLSNREPLLQLSNLFGKWLTVYCSQILRSYIPDRLVTT
DDIKTICLVITTADYCFNTTNQLEQKLVDQLDPEFKVGVDLEREKGMFLEVINLCIRNLV
RKVEAGCEFAWREMANTNWSKVETVGDQSSYVADLTSNIERDTLAILECMKKETHARMLC
DKIVEAVTGDFLQSVVRCRPISEVSAEQMLLDLYVLKGCFLKLPTLAQKQHDHGSMDING
TDKSSTGIHNNDSGTTNGLTTGSETSTVSSAYTRHVTKSLSRVETILKVILTQVNPAEGL
VQNYFYLVGDKSQQNFAKILELKGITRGGQTRFLEMFNAHLKAHDNLVDESPILSSLQLN
PLVGKGTVVGGSRVSSASHINIGIGGLGGAAGIMGSGSGINLVGSNNSSNNNSGSSSGNP
FQNGSHLFDTKGPSILSKEGFERFTHGAEAPVNKLNENFRNFGRLFRRDGSGSPLGNRNN
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtttggtgtggcaaatggccacagcggtggcagtggactcggtggcgaggac
gatgacccactgtcgttgccgaattactcgcccgtggaccatttgaacgtgctatttccc
acgtcggccaatgttcagagggtcggcgatatccgggatctggcccagttgtatggccaa
tcactcgagtctaagctgataaatggacgaaggacatctggttcgactggcagtagcagt
atcgaggctgtatcgaagacgctggaagaggtccggtcgttgacagaccagatcgactca
cttcggacccaagctgctagcactgatcaggctataacagctatgaccttggatatcaaa
aaactcgataatacaaaagctaatctgattcaaagtataactgtattgaaacgacttcag
atgctgaccacagcgtataatcagctgtcatcactggtagcacgtcgtcaatacaaagag
atgtcacaaacacttccggcagttatggagctaatggctcatttccgacagtttcgaagc
atctcacagattgccactctcagtaaacaggtatcggacatccaagtacgcatttccgac
cagattttcgacgatttcgctactgtcattgaacacaaacccggttcccgaacagtggct
ggttcagcaggtgtatctggtactggcactcctgtactgaatggctcttctacaggattc
tctggttcaggagcaggctctggaaccgggtccgccactcaaaccggtgcaccggcgtcg
atagtggatatcagtgctactcttgctgacgcgtgtgttgtgcttgatagcctgccaggg
tctacggcaagagacagactgatatcatggttttgcaatgttcagctaaaagaataccgg
accatttttcgcagtagtgacgaggcagggtctctggagaacatttctcgtcgttattcg
tacttgaaacgactcctcaagactcatagtgacgagtatgctagatactttgttccaagc
tggaatgttactgaagaactgtgtaaacgattctgtgctactacaagagaagacattcaa
ggactgctttcacaagtaagcagtactcagactaatccaaaagaatcagacgttcagtta
ctgctcaattcactaaatgaaacacttgaattcgagcaatatcttgagaaaaagtttaaa
tatatgaaccctcgaccagcttcatcatcatcaacatcgtcatcagaaccatttaaattt
gccaactctgtttcaatagcattccaaccacatctgaacatctggattcagttccaagac
agagccctggcccagaagttccaggagttcagagctgtttctcgacattcacagagccag
ggcacgcgcagccagactggatcagatgataacgatcaggaaaataaagacgacgatgat
cccactgtgctcccgtcctcagcagacttgtttatattctatcggtcagtacttacacag
actgccaagctgtcgaaccgagaaccactactacaactgtcaaatctgtttggtaaatgg
ctgacggtatactgtagccagattcttcgatcatacataccggacagactagtcaccact
gatgatatcaagaccatctgtctagtaattaccacagcagactactgtttcaacaccaca
aatcagctggagcagaagcttgtagaccaattggatccggagtttaaagttggagtcgat
ttggaacgcgagaagggcatgtttttggaagtcatcaatttgtgtatccggaatctggta
aggaaagtcgaggcaggatgcgagtttgcatggcgcgaaatggctaatacaaactggtcc
aaggttgaaactgttggcgaccagtcatcttatgttgccgacctgacgtctaatattgaa
cgtgacactctggctatactcgaatgtatgaagaaagaaactcacgctaggatgctgtgc
gataagattgtcgaggcagtcactggagacttccttcaaagcgttgtccgttgccgacct
atttctgaggtgtctgctgagcaaatgctactggacttgtatgtattgaagggctgtttc
ctgaaacttcccacattagcccagaaacaacacgaccacgggtctatggatatcaatggc
actgacaaatcatcgactggaattcacaataatgacagtggaactaccaacggtttgact
acaggcagtgagacgagtacagtgtctagtgcttataccagacatgtaaccaagtcgctg
tcacgggttgagacgatactgaaggtgattctgacccaagtgaaccctgccgagggactc
gtacaaaactatttctatcttgtcggagacaagtcgcagcagaactttgccaagatcctt
gaactcaagggtattacccgtggaggacagacgaggttcctggaaatgtttaatgcccac
ttaaaagcacacgataaccttgtcgacgagtcgccgatcctgtcgagtctacaattgaat
cctctggttggcaagggcactgtagtgggaggctcgcgagtgagcagcgcatcacacatc
aacataggcattggcggtctgggtggagctgcaggaataatggggtctggcagcggaatc
aacctcgttggcagcaacaacagcagcaacaacaacagcggcagtagcagcggcaacccg
ttccagaacggtagtcatctgttcgacaccaaaggaccctcgatcctgtcaaaagaaggc
tttgaacgcttcacccacggtgccgaggcaccggtaaacaaactcaacgagaacttccgt
aacttcggccgtctgttccgtcgtgacgggtccgggagcccgctcggcaaccgcaacaat
cactag
DBGET
integrated database retrieval system
