Sugiyamaella lignohabitans: AWJ20_5136
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Entry
AWJ20_5136 CDS
T05270
Symbol
ECM16
Name
(RefSeq) Ecm16p
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_5136 (ECM16)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AWJ20_5136 (ECM16)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
90S particles
Helicases
AWJ20_5136 (ECM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
nSTAND3
ResIII
AAA_19
ATPase
PhoH
FtsK_SpoIIIE
NACHT
Motif
Other DBs
NCBI-GeneID:
30037345
NCBI-ProteinID:
XP_018736654
UniProt:
A0A161HLG4
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All DBs
Position
D:1627534..1630995
Genome browser
AA seq
1153 aa
AA seq
DB search
MKSLKTLGTRSETKRDKVEEALMLEKLGKGTEETQAILYEEREVKEWTEEDSPFGNMVTN
EFDTDKMDEDEQPKTSSFIDHRPKGPQGMGFGFQTATKITSKKAKPKYNWRARLEQEKAR
KRGIEMYGDGSSDENSSENSDQDSEDDGSSDGTGDDVEEDEEDEEWAGFEDDGAKATSIN
GNGLNRSIDVDDEQDFEEDDDNEDDDDEDDEDEEEDEEDDGKSKGQQFKEWANQMINPES
ERIETPVFKGTYTPLDRSEDKEALPSEYVVPEKAVDRKAYYVNVERSDEIQQARIQLPVV
SEEQRIMEAIHNNDTVVICGETGSGKTTQVPQFLFEAGYGHPESKTPGMIGITQPRRVAA
VSMSNRVSNELGNYGSKVGYQIRFDATVKPDTAMKFMTDGVLLRELTTDFALTKYSCIII
DEAHERNINTDILIGVLSRVVSLRKEMSSNPDSKLSPLKLVIMSATLRVSDFTENSSLFP
NPPPVLKVEARQFPVSVHFNRRTPHDYLDETYKKAVKIHQKLPPGGILIFLTGQNEINQV
CRKLKQAFPFKKGHKLAATETSVKVRVSAQESVTEVEDIDFGLEETLQPERRVTSDDIVD
DYDEDDEEEEEGFEETIEEGQDINAPLHVLPLYSLLPTKEQMKVFQEVPAGSRLCVVATN
VAETSLTIPGIRYVVDCGRSKERHYDEETGVQSFRVSWTSKASADQRAGRAGRTGPGHCY
RIFSSAVFERDFNQFSKPEILRMPIEGLVLQMKSMGIDNILNFPFPTPPPANSLGKGLRL
LQFLGALSQADKPLLTELGKSMSLFPLTPRFAKMLIISNQHGCLPYIIAIVAALTVGEPF
LTQEEVGINIISGQGNESDDDDDDAENDISIELKEANRRLRSEYFGALQRFSALDFKCDA
LKTLAAVCAFDFDKDRESFCKKNFLRFKAMEEISKLRKQLAYLVAVNTRPNAVDSTVQKL
NAKLGPPSAVQIKALKQMIAAGFIDQVAGRADIVGTDEIKSKQRVITFPYIPLFPTSVAN
IDPYQARDPYVYIHPGSILANGGGAPPEYIIYASVHVNEGHRAGQTPKVRMKPLTDITPS
QLSNVARSSALITYSKPLGPPYGPRSITPTKRECWVVPRFGAAIGSGSVGWDLPAKKVIQ
EKDGTNWVVTSDA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttaaaaacgctcggtactagaagtgaaacgaagcgagataaagtggaagag
gcattgatgttagaaaaattaggcaaaggaactgaagaaacgcaggcaattctatatgaa
gaaagagaagtaaaagagtggactgaagaagactcaccttttggtaacatggtaacgaat
gagtttgatacagataagatggatgaagacgaacaacccaaaacatcatcttttattgac
catcgtcccaagggtcctcaaggaatgggctttggattccagactgcaacaaaaataaca
tccaaaaaagccaaaccaaagtacaattggagagctcgattggaacaagaaaaggcccga
aagcgaggaatcgaaatgtatggagatggaagcagcgatgaaaactcaagtgagaattca
gaccaagattcagaagatgatgggtctagcgacggtactggagatgacgttgaagaagac
gaggaagacgaagagtgggctggatttgaggacgatggtgctaaagctacctctatcaat
gggaatggtctaaacagatccattgatgtcgatgatgagcaagactttgaggaagacgac
gacaatgaagacgatgacgatgaagatgacgaagatgaggaagaagatgaagaagatgac
ggtaagtcaaaaggccagcagtttaaggaatgggcgaaccaaatgatcaatcccgagagc
gagcgtatcgaaacacctgtgttcaagggtacctatactccccttgaccgttctgaagat
aaggaagcgctaccttctgagtacgttgttccagagaaagctgttgatagaaaagcatac
tacgtcaacgttgagagatcagatgaaatccaacaagctagaatccagctaccagttgta
agcgaggaacagagaatcatggaggcaattcacaataatgacacggtcgtgatttgtggt
gaaactggtagtggtaaaactacgcaagttccacagtttctatttgaagcaggttatggc
caccctgaaagcaagacaccaggaatgataggaatcacccagccaaggcgtgtcgcagct
gtcagcatgtccaatcgtgtgagcaatgaactaggcaattatggtagcaaagtcggttat
caaattagatttgatgccacggttaagcctgatacagctatgaagttcatgactgatggt
gtgcttttacgagaattgaccacagactttgcccttacaaaatacagttgtattattatt
gacgaagcgcacgagagaaatatcaataccgatatcttaattggtgttttgagcagagtt
gtatcacttcgaaaggaaatgagttctaatcccgatagcaagctcagccctttgaagcta
gttatcatgtcggcaacattacgagtatctgactttacagaaaacagctctttgttccca
aatccaccacccgtgttaaaagttgaggctagacagtttccagtttcagttcatttcaac
agaagaactcctcatgattatctcgacgagacgtataaaaaggcggtcaaaatccatcaa
aaacttcccccaggaggaattctcattttcctgaccggccaaaatgaaatcaatcaagta
tgtcgtaagctaaagcaagcgtttccatttaagaaagggcacaagcttgcggccaccgaa
acatcggtgaaagttcgagtttcggcccaagaatctgtgactgaggttgaagatattgat
tttggtttagaagaaactctccaaccggaaagaagggtaacctctgatgacattgtcgat
gattatgacgaagatgacgaagaggaagaagagggatttgaggagacaattgaagagggt
caagatatcaacgctccattgcatgttctacccctttactcgctgttacctaccaaggag
caaatgaaggtgttccaggaggttcctgccggcagccgtttatgtgttgtggctaccaat
gtagccgaaacaagtttgaccatcccaggtattcgatatgttgttgactgtggtaggtcg
aaagaacgtcattatgatgaagagactggggttcaaagttttagagtgtcgtggacttct
aaagctagtgctgatcaaagagctggtcgtgccggtcgtactggacctggtcattgttac
cgcatattttcttctgctgtatttgagcgcgattttaaccaattcagcaagcctgaaatt
ctacgcatgccaatcgagggtcttgtgcttcagatgaaatctatgggcattgataacatt
ctaaactttcctttccccacccccccgcctgcaaacagtcttggaaagggtctgagattg
cttcagttcttaggagctttatcccaagctgataagcccctgttgacggaacttggaaag
tcgatgagtttgtttccattaactccgagatttgcgaaaatgcttatcatttccaaccag
catggatgtttgccatatattattgcaattgtagcagcattgacagttggagaaccgttt
ctcactcaggaagaagttggaatcaacataatttctggtcagggaaatgaaagtgacgac
gatgatgatgatgctgaaaatgacattagtatagagcttaaggaggcaaacagaaggctc
cgaagtgagtactttggagcacttcaacggttttcagcacttgacttcaagtgtgacgct
ttgaagacactagcagctgtatgcgcatttgactttgataaggatcgtgaaagtttctgc
aagaaaaactttctccgtttcaaggctatggaagaaatttctaaacttcgtaaacagttg
gcttatcttgttgcagtcaacacccgtccaaatgctgttgatagcactgttcagaaactc
aatgctaaacttggccccccttcagcggttcagatcaaagcgctcaagcaaatgattgct
gctggatttatagaccaagttgctggcagagcagatatagttggtactgatgagatcaag
tcaaaacagcgggttatcaccttcccatatatcccacttttcccaacatcagttgccaac
atcgacccttatcaggcacgcgatccgtatgtatatattcacccaggatctattcttgct
aatggcggaggagcccctcctgagtacattatttacgcgtcagtccatgtaaatgaagga
cacagagcaggacagacacctaaagtgagaatgaagcccctaacggacatcacaccttcg
caactttctaacgttgcgcggtcttctgctttaattacatactcgaagcccctcggacca
ccatacggtcccagaagcatcacacctaccaagcgcgagtgttgggtagttcctagattt
ggtgctgctattggcagtggctcagtaggctgggacctaccggcgaaaaaagtcatccag
gaaaaagatggcactaactgggttgtcacgagtgacgcatga
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