Sugiyamaella lignohabitans: AWJ20_998
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Entry
AWJ20_998 CDS
T05270
Symbol
MOT2
Name
(RefSeq) CCR4-NOT core ubiquitin-protein ligase subunit MOT2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWJ20_998 (MOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slb03000
]
AWJ20_998 (MOT2)
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_998 (MOT2)
04121 Ubiquitin system [BR:
slb04121
]
AWJ20_998 (MOT2)
Enzymes [BR:
slb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AWJ20_998 (MOT2)
Transcription factors [BR:
slb03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
AWJ20_998 (MOT2)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AWJ20_998 (MOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AWJ20_998 (MOT2)
Ubiquitin system [BR:
slb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AWJ20_998 (MOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Rtf2
zf-RING_2
zf-C3HC4_3
CAF1A
zf-TFIIIC
zf-C3HC4
SET_assoc
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
30038091
NCBI-ProteinID:
XP_018735207
UniProt:
A0A167DBS7
LinkDB
All DBs
Position
A:complement(3158164..3159909)
Genome browser
AA seq
581 aa
AA seq
DB search
MPSLDSFISDDEEELCPLCVEEMDLSDKNFKPCPCGYQVCQFCYNNIRQNPQLNGRCPAC
RRPYDDETVEYKMISQEEWKQDHLRQARKERERKQREREKKETEQQQSSKKHLSGMRVIQ
KNLVYVIGLNPNIPTEELHNTLRGDQFFGQYGKIQKIVINRRNNANGNPGLGVYVTFARK
EDAAKCIAAVDGSINDGKYLRAAYGTTKYCSSYLRGQPCPNPNCMFLHEPGEEADSYTRQ
DLSTIQHAARGGSGSTGTANSGPGSSGSGPGSASSGPTSGPASAVAAAAVASSGVAASPA
PAQRVMSRSSTRLVDSNHGEDDKEAPALPASVSWAHKASPPSVASKLHIGKSGGDVSAPG
TAPASPSTSATVTAASGTANASSSGAGSADSVPSHLLPQPEPQQIDPAIKIINENLECLS
NKSSFSFVFSSNILSEDDLNNSLPPFFSFSKTAVSKEPAAIDTGKFASLFASFNKTGGLG
ANKGYNLLSLAETDEQLLQSQPRQPPTQPQSQSQQPPTQQPGQGQLGPQYSNEVPVAAAT
PPPGLFSGQQPIQNHMQPTQNNQNSQELLAHLMNGGSKGEN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtctagattcatttatttccgatgatgaggaagagctgtgtcctctctgtgta
gaggagatggacttgtcggacaagaacttcaaaccatgtccgtgtggttatcaggtttgt
cagttctgttataacaacatccgtcagaatccacagctgaatggacggtgtccagcgtgt
cgtcgtccttatgacgatgagactgtcgagtataagatgatctcgcaagaggaatggaag
caggatcatcttcgacaggctcgtaaagagcgggaacgaaaacagcgggaacgggaaaag
aaggagacggaacagcagcagagctcgaaaaagcatctctctggcatgagagtcattcaa
aagaaccttgtgtatgttattggactgaatcctaatatccctactgaggagttgcataat
actctacggggagaccagttttttggtcagtacggaaaaatccagaagattgtcatcaat
cgtcgtaataacgccaatggtaacccaggtctgggtgtatatgtgactttcgctcgtaaa
gaagatgctgccaagtgtattgctgctgttgatggatcaattaatgacggcaagtatctg
cgtgctgcttatggtaccaccaagtattgttcttcttacttgcgtggccagccatgtccc
aatcctaattgcatgtttttgcacgaacctggtgaggaagctgattcgtataccagacag
gatctgtcgacgattcaacatgctgctagaggtggaagtggtagtactggaactgcaaac
tcgggtcctggatcaagtggttcgggccctggatctgctagttcgggtccaacttctggt
cctgcttctgccgtggcagcagctgctgtagcttctagtggagtagctgcctcgccagct
cctgctcaaagagtcatgtctcgatcatcgaccaggttggtagattcaaatcatggtgag
gatgacaaggaagcacctgctcttcctgcctctgtatcatgggctcataaggcatctcct
ccatctgttgcatcgaaattacatattggcaaatccggcggcgatgtctcggctccagga
actgctcctgccagtccatctacgtctgccactgtcactgctgcttctggtactgctaat
gcaagcagttctggggccggttctgcagattcagttccatctcatctgttaccacaacct
gagccacagcaaattgatcctgctatcaagattattaacgagaatttggaatgtctttcc
aacaaatcttcattcagttttgtgttttcgtccaatattctttctgaggatgatttgaat
aatagtctaccaccattcttttcattttccaagactgctgttagcaaggagcctgctgct
attgatactggcaagtttgcttctttattcgcttctttcaacaagactggtggtctgggg
gctaataaaggatataatcttttatctttggccgagactgacgaacagttacttcaatca
caacctcgtcaaccacctacccaacctcagtcacaatcacaacagcctccaacacagcaa
cctggacaaggtcagctgggtcctcaatatagcaatgaggtgcctgtagcagctgccacg
cctccaccaggtctcttttcaggccaacaacccatccaaaaccacatgcaaccaacacaa
aacaatcaaaacagccaggagttattagcccatttaatgaatggcggttctaaaggtgag
aactaa
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