KEGG   Streptomyces lydicus 103: SL103_11945
Entry
SL103_11945       CDS       T04699                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
slc  Streptomyces lydicus 103
Pathway
slc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SL103_11945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slc03400]
    SL103_11945
Enzymes [BR:slc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SL103_11945
DNA repair and recombination proteins [BR:slc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SL103_11945
    RecFOR pathway proteins
     SL103_11945
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase nSTAND3 DUF815 Sigma54_activat AAA_3 AAA_14 RNA_helicase Sigma54_activ_2 TsaE AAA_28 Zeta_toxin AAA_19 AAA_18
Other DBs
NCBI-ProteinID: AOP46863
UniProt: A0A1D7VJD1
LinkDB
Position
2757929..2759014
AA seq 361 aa
MNWDDTAPSTEDAPAGADRLVGPDADGEDTAVEAALRPKDLAEFVGQERVREQLDLVLRA
ARARGATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEG
EVLFLDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLL
PPPLRDRFGFTAHMEFYAPAELERVIHRSAGLLDVEIDADGAAEIAGRSRGTPRIANRLL
RRVRDYAQVKADGLITREIASQALGVYEVDARGLDRLDRAVLTALLKLFGGGPVGLSTLA
VAVGEERETVEEVAEPFLVREGLLARTPRGRIATPAAWAHLGLVPPQHQPGGSGQQGLFG
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
gtgaactgggacgacaccgcaccgtccaccgaggacgccccggccggcgccgaccggctg
gtcgggcccgacgcggacggcgaggacaccgccgtcgaggccgcgctgcggcccaaggac
ctcgccgagttcgtgggccaggagcgggtgcgcgaacagctcgacctggtgctgcgcgcc
gcccgcgcccgcggcgccaccgccgaccacgtcctgctgtccggcgcgcccggcctcggc
aagaccaccctctccatgatcatcgccgccgagatgggcgccccgatccggatcacctcc
ggcccggccatccagcacgccggcgacctcgcggcgatcctctcctccctccaggagggc
gaggtcctcttcctcgacgagatccaccggatgtcccggcccgccgaggagatgctctac
atggcgatggaggacttccgcgtcgacgtcatcgtcggcaagggccccggcgccaccgcc
atccccctcgaactcccgccgttcaccctggtcggcgccacgacccgggccggtctgctg
ccccctccgctgcgtgaccgcttcggcttcaccgcccacatggagttctacgcccccgcc
gagctggagcgggtcatccaccgctcggccgggctgctggacgtcgagatagacgcggac
ggcgccgccgagatcgccggccgctcccgcggcacgccccgtatcgccaaccgcctgctg
cgccgggtccgcgactacgcccaggtcaaggcggacggcttgatcacccgggagatcgcc
tcgcaggccctcggggtctacgaggtcgacgcccgcggtctggaccggctcgaccgcgcg
gtgctcacggcgctgctcaagctcttcggcggcggcccggtgggcctgtccaccctcgcg
gtcgcggtgggggaggagcgcgagacggtcgaggaggtcgccgagccgttcctcgtacgg
gaagggctgctcgccaggaccccccggggcaggatcgcgacccccgcggcctgggctcat
ctggggctcgttcccccgcagcaccaaccgggaggaagcggacagcagggcttgttcggc
ccgtga

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