KEGG   Streptomyces leeuwenhoekii: sle_24320Help
Entry
sle_24320         CDS       T04414                                 

Gene name
sle_24320
Definition
(GenBank) Putative DNA ligase-like protein Rv0938/MT0965
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sle  Streptomyces leeuwenhoekii
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sle00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    sle_24320 (sle_24320)
Enzymes [BR:sle01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     sle_24320 (sle_24320)
DNA repair and recombination proteins [BR:sle03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     sle_24320 (sle_24320)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
chromosome:2961986..2962867
Genome map
AA seq 293 aa AA seqDB search
MAPITEVEGRRVALSNLEKVLYPAAGFTKGELLHYYATVAEVLLPHLRDRPVSFLRYPDG
PDGQLFFTKNVPPGTPEWVTTAEVDRSEGPTRMVLVQDLPSLMWAANLVTEFHTHQWVAG
ASGEADRLVFDLDPGPPATVVHCCEVALWLRERLAADGIEAYAKTSGAKGLHLLAAVRGS
SSERVTEYAKALAVEAERTMPRLVVHRMTKSLRPGKVFVDWSQNAARKTTATPYTLRARP
EPTVSAPVTWEEVEGCRAAGQLVFRAGDVGPRVQDYGDLLAPLFERRRAGVLP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atggcgcctatcacggaggtggaggggcggcgggtcgcgctgagcaatctggagaaggtg
ctgtatcccgcggcgggcttcaccaagggggaactgctgcactactacgcgacggtcgcc
gaggtgctgctgccgcacctgcgggaccgcccggtgtccttcctgaggtatccggacggg
ccggacggccagctcttcttcaccaagaacgtgccgccgggtacgcccgagtgggtcacc
acggccgaggtggacaggtcggaggggccgacgcggatggtgctggtgcaggacctgccg
agcctgatgtgggcggcgaacctcgtcaccgagttccacacccaccagtgggtggccggc
gcctccggcgaggccgaccggctggtgttcgacctcgatcccgggccgcccgcgaccgtg
gtccactgctgcgaggtggcgctgtggctgcgcgagcggctggcggccgacgggatcgag
gcgtacgccaagacctccggggccaaggggctgcacctgctggcggccgtgcgcggatcg
tcgtccgagcgggtgacggagtacgccaaggcgctcgcggtggaggcggaacggaccatg
ccgaggctcgtcgtgcaccggatgacgaagagcctgcggcccgggaaggtgttcgtcgac
tggagccagaacgccgcgcggaagaccacggccaccccctacaccctgcgggcgcggccc
gagccgacggtgtcggcgccggtgacgtgggaggaggtcgagggatgccgggcggccggg
caactggtcttccgggcgggggacgtgggaccgcgggtgcaggactacggcgacctgctc
gcacctctgttcgagcgacggcgggcgggcgtgctgccgtga

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