Spirosoma linguale: Slin_0616
Help
Entry
Slin_0616 CDS
T01156
Name
(GenBank) TonB-dependent receptor plug
Organism
sli
Spirosoma linguale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
Big_1
CooC_C
Glypican
MetallophosN
Motif
Other DBs
NCBI-GeneID:
8724344
NCBI-ProteinID:
ADB36680
UniProt:
D2QG73
LinkDB
All DBs
Position
complement(764436..767627)
Genome browser
AA seq
1063 aa
AA seq
DB search
MKTQVKASVSFPDRSTGKHLRRVFRLTIFLLGIEGALGLMNLSTANQAFAQQVKQLTGRV
LDSQKNPVPGATIVAKGSNTGVTTDADGKFTLSVSNTISSLVISYIGMTPQEIEVGNRSA
MGDIVLSESSMVLREVVVTALGIERAAKTITYSIQKLGGEQINEVRDANFTNTLSGKIAG
LTITPSANGPGGATRIVLRGNRSIQGSNNALIVVDGVPIDNSTPAGQVRSDAGGQSGSDG
ASSINPDDIESLNVLKGAAGAALYGSRAANGVIIITTKRGKSGKLDVNINSGVTIDRALT
TPNLQNAYAQGSGGTYSTLASGSWGPAISGQSVTNWQGQTVNLQAYPDNIKDFFQTAVST
NNSVGVSGGSEKIQTYLSYSNNYINGIVPNNRLSRNTFNGRMSVDLTSRLSVDAKVTYML
QNIYDKPGVGGDGLVVANIFRIPRSVDPETLKSYKTVNVSGIETPTYWTTTDAVYMNPYW
TINNTHHDENRSRVTGLLVMRYKLTDWLNIQGRVSSDSYNDFITQKYTNNTVNYARQPGG
FYSEGNDFIAERNLDVLLTGTNRLTDDLKVNYNLGGSVLSRRLRHRVNAADGLGFPNKYD
LSYATTLKVEAVTSKRELQSVYGTAQFAYRDYLFLDLTARNDWSSTLPSPYAYFYPSVGI
SAILSEMVRMPAWISLGKVRASVTKVGNDASPYLLGQTYSYIRGGFGGYIASSSTKAISD
LKPELTQSLEIGTEWGFYNNRLGLDLTYYKTNSQNQLLQVASPASSGYSTLNVNAGNIQN
SGVEVVLTAKPIVTKDFTWNIGLNYARNTNKVLELYEGVSLFYLGSSANVRMATPVIKEG
GSYGDLYGYKWKTMNGQYVVNANGVPVKTDAIEKLGNFNPKFTAGFSNNFTYKNWNLNLL
IDGKFGGIVTSGTSAQMAYAGTSASTTTFREANSWLIPGVTPEGQPNTVSVNAEKFWQTV
SQGDYSWGEFFTYDATNVRVRELTLGYNFTRLPGFFKNARLSFVARNLLFLYRGNALLNV
PGIGKRKLDFDPEVSFGNSNFQGVEYYNLPSTRNIGVNLKLSF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaagtaaaagcatccgtcagttttcctgatcgtagtacaggcaagcacctc
cggcgggttttccgtctgaccatttttctcctcggtatcgaaggggcgttgggtctgatg
aacctgtctaccgcaaaccaggccttcgcacagcaggtgaaacagcttacaggtcgcgtg
ctggatagccagaaaaatcccgttccgggtgcaacgattgtggccaaaggcagcaatacg
ggcgttacaaccgatgccgacggaaagtttacgctttccgtttccaatacgatcagttca
ctcgtcatctcttatattggcatgacaccacaggaaattgaagtgggtaatcgctccgca
atgggtgatatcgttctgtcggaaagcagcatggtattacgcgaagtggtcgtaacggca
ctcggtatcgaacgagcggccaaaaccattacctactcgatccagaaacttggtggtgag
caaattaacgaggtgcgggatgctaactttaccaacacactctccggcaaaattgcgggc
ttgaccattacgccatcggcaaacgggcccggcggtgcaacccgcattgtgctccggggc
aaccgctccattcaaggctccaacaatgccctgatcgttgtcgacggtgtgcctatcgac
aactcaacgcctgcgggccaggtgcgaagtgatgccggtggacagagcggcagcgatggc
gcgtcgagcataaaccccgatgatattgagtcacttaacgtactgaaaggagccgccgga
gccgccttgtatggcagccgggccgccaacggggttatcattatcacgacgaaaagagga
aaaagcggcaagcttgacgtcaatatcaactcaggggtgactatcgaccgggctttaacc
acgcctaatttacagaatgcttatgctcagggatcgggaggaacttactcaacactggca
agcggaagctgggggccagccatcagcggacagagtgtaaccaactggcagggccaaacg
gttaatcttcaggcttatcccgacaatatcaaagactttttccagactgcggtatcgact
aataactcagtgggcgtgagtggcggctccgagaaaatacagacctatctgtcgtattca
aataactacatcaacggcatcgtacccaataaccgcctgtcgcgcaataccttcaatggt
cggatgagcgtcgatttaacgagtcggctatccgtcgatgccaaggtcacttacatgctt
cagaacatttacgataagcccggtgtgggtggcgacggcctcgtagttgccaacattttc
aggattccccgaagtgtggaccccgaaaccctgaagtcctataagacggtgaacgtcagt
ggaattgaaacgcccacctactggaccaccacggatgccgtctatatgaacccttactgg
accatcaacaatacccaccacgacgagaaccggagtcgggtaacgggcctgctggtgatg
cgctacaaacttaccgactggctgaacattcaggggcgtgtcagttccgacagttacaac
gacttcataacccagaaatacaccaacaataccgtcaactacgctcgtcagcccggtggt
ttttattcggaaggcaatgatttcattgccgagcgcaatcttgatgtattgctgaccggt
actaaccggctgacggatgatttgaaagtaaactataacctgggtggttctgtgctgagc
cggcgcctgcgccaccgcgttaatgcggccgacggccttggcttccccaacaaatatgac
ctcagctatgctactacgctgaaagtagaagccgttaccagcaaacgtgaacttcagtca
gtttacggaacggcccaatttgcctatcgggattacctgtttctggacctgacagcccgc
aacgactggtcgagcacgttaccctcgccttatgcctacttttacccatctgtaggtata
tcagcaatcctttccgaaatggtcaggatgcccgcctggattagccttggcaaagttcgg
gcctcggtgaccaaggtggggaacgatgccagcccttatctgttaggccagacgtatagc
tatatccgtgggggcttcggaggctatattgccagcagcagcaccaaagctatatcagac
cttaaaccggagctgacccaatcgctggagatcggcacggaatggggcttttacaacaat
cggctgggccttgacctaacctattacaaaaccaactctcagaaccagttgctccaggtc
gcttcaccggcctcgtccggctattcgacgctgaatgtgaatgcgggcaatatccagaac
tcgggtgtagaggtggtgttgaccgctaagccaattgtaacaaaggattttacctggaat
attggcctgaactatgctcgaaacaccaataaagtacttgaattgtatgagggagtgagc
ctattttaccttggctcatcggccaatgtacgtatggccacacccgttatcaaagagggt
ggttcatacggcgatctatatggctacaaatggaaaacgatgaacggtcagtacgtggtc
aacgccaatggtgtaccggtaaaaaccgacgctattgaaaaactgggcaacttcaacccg
aagttcaccgcaggcttcagcaacaatttcacctacaaaaactggaacctgaacctgctc
atcgacggcaagtttggcggaattgtaacttcgggcacatccgctcagatggcctatgcg
ggcacttcggccagtacgacaaccttccgggaagccaactcctggctcattcccggtgtt
acccccgagggtcaacccaatacagtctccgtaaatgcagagaaattttggcaaaccgtt
tcgcagggcgactactcgtggggcgagtttttcacctacgacgccaccaacgttcgggta
cgtgaattaacgctgggctacaattttacccggctgccgggattcttcaaaaacgcccgc
ctatcgttcgtagcccgcaacctgctcttcctctaccggggaaatgccctcctcaacgta
cccggcattggcaaacggaaacttgatttcgaccccgaagtgagctttggcaacagcaac
ttccagggtgtggagtattataacctgccatcgacccgaaacattggtgtgaacctcaaa
ctctctttttaa
DBGET
integrated database retrieval system
