Spirosoma linguale: Slin_1025
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Entry
Slin_1025 CDS
T01156
Name
(GenBank) choline dehydrogenase
Organism
sli
Spirosoma linguale
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
FAD_binding_2
NAD_binding_8
FAD_binding_3
Pyr_redox_2
Pyr_redox_3
HI0933_like
Motif
Other DBs
NCBI-GeneID:
8724755
NCBI-ProteinID:
ADB37076
UniProt:
D2QJ62
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Position
complement(1244291..1246012)
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AA seq
573 aa
AA seq
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MVNLAVDSQKARTYDAIVIGSGMSGGWAAKELTEHGLHTLLLERGRDVKHVTDYPTAMLN
PWDMEHRGQVPLASRQEYSIASRNYAFREDTRHFFAKDSDQPYIQEKPFDWIHGYQVGGR
SLLWGRQTQRWSDFDFTGPARDGFAVDWPIRYADLAPWYSHVEKFAGISGNKDGLATLPD
GEFLAPHEMSCVETHFKKQVAAHYPDRHVIIGRAAHLTTPRNIHFRQGRAQCQHRTLCER
GCPYGGYYSSNASTIPWALRTGKLTLQPNSVVHSIIYDDNKPGGGKATGVRVIDTNTLQM
TEYHARIIFVNASALHTNLILLNSTSNRFPNGLGNDSGLLGTHMAFHSYRGRMSGTYEGL
NAFTTDGRRPNSSYIPRFRNVYKQETDFLRGYAATFYASREPIQNQDGLGASLKQRLLDP
TPGDWQVGSAMMAETIPKAESTVRLDPTLKDNFGIPQLRVSVGYDANDEKILKDYFEQLT
EMFTLAGFKNIRTQDTGRLPGSENHEMGGVRMGHDPKTSLLNRWNQLHHCKNVFVTDGAC
MTSTSTQNPSLTYMALSARAANYAVKQMKAGTL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatttagcagtagatagccagaaagcccgcacctacgatgccattgtgattggc
tctggtatgagtggcggctgggcagcaaaggaacttaccgaacacggtctgcatacgctt
ttactggagcgaggcagagacgttaaacacgttaccgactaccctactgccatgctgaat
ccctgggacatggagcaccgggggcaggttccgctcgccagtcggcaggagtactccatc
gccagccgtaattatgcctttcgggaagatacccgccactttttcgctaaagacagcgac
cagccctacattcaggaaaagcctttcgactggattcacgggtatcaggtgggtggccgt
tcgctgctttggggacggcaaacccagcgctggagtgatttcgattttaccgggccagcc
cgcgatggctttgcagtagactggcccattcgctacgctgatttggccccatggtatagc
cacgtcgaaaaatttgcgggcatttcgggtaataaagacggactggcgaccctaccggat
ggtgaatttctggctccgcacgagatgtcgtgcgtggagactcatttcaaaaaacaagtg
gcggctcactatccggatcgacacgtgatcatcggccgggcggctcacctgacaacgccc
cggaacattcattttcggcaggggcgcgcgcagtgtcagcaccggacgttatgcgaacgc
ggctgtccttacggtggctattacagcagcaatgcctccaccattccgtgggcgctgcga
acgggaaagctaaccttacagcccaactcggtggtgcactccattatttatgatgataat
aaaccagggggaggcaaggcaacgggcgtgcgggtcatcgacaccaacaccctgcaaatg
acggagtaccacgcccgtatcattttcgtgaatgcatcagcacttcatacgaatcttatc
ttactcaactcaacctccaaccggttcccaaatgggctgggtaatgatagtggcctattg
ggtacgcacatggcgtttcacagttaccggggtcgtatgtcgggcacctacgaagggtta
aacgcattcacgaccgacggacgccgacccaacagcagttacattccgcgattcagaaat
gtttacaaacaggaaacggattttctgcgtggatatgccgccaccttctatgcgtcgaga
gaaccgatccaaaaccaggatggcctcggtgcgtcactgaaacagcgtttactcgatcca
acgccgggcgactggcaggtgggttctgccatgatggccgaaaccatccctaaagccgaa
agcaccgtgcggctggaccctaccctgaaagacaacttcggaattccgcaactccgggta
tcggtaggctacgatgccaacgacgaaaaaattctgaaggactacttcgaacaactgacc
gaaatgttcaccctggccggatttaaaaacatccgcacccaggacaccggtcgactaccc
ggcagcgaaaaccacgagatggggggcgttcgtatgggacatgaccccaaaacatcgttg
ttgaaccgctggaaccagcttcaccactgcaaaaacgttttcgttactgatggagcctgc
atgacctccaccagcacccaaaacccgtctcttacctacatggccctcagtgcaagggct
gccaactacgccgtgaaacaaatgaaagcggggacgctgtaa
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