Spirosoma linguale: Slin_2107
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Entry
Slin_2107 CDS
T01156
Name
(GenBank) AraC family transcriptional regulator
Organism
sli
Spirosoma linguale
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Reg_prop
HATPase_c
Response_reg
HTH_18
HisKA
HTH_AraC
Y_Y_Y
DUF5074
HTH_Crp_2
Motif
Other DBs
NCBI-GeneID:
8725845
NCBI-ProteinID:
ADB38142
UniProt:
D2QDL2
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Position
2545026..2549075
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AA seq
1349 aa
AA seq
DB search
MLFKRLLVLLWLWWPCIVSGQSGKLFTVETGLSGSLVTDIHQDQSGFVWIATEDGLNRFD
GIKFTVYQHSKKDTTSLLNNQIHALFADKSGRMYVGSTEGLQYYDPATDAFHTIPLKLPN
GQSINASVSTLCQRKNGDVLVGTSGHGTFKLIRKGPLLFGRKVLANAPSEIIIRILEDTE
QNLWVSTEDKGLYRFSGQSVNAYFVSKKSQNNIISSICQDRYGRLFVGNMSSGLYRYDPA
SNTFLSIPYNGRTDLPVADLLVNRNNQIVVATSGKGMKYFDPVSDKILDLESSVTSFDFS
RTKVNTMLEDQAGNIWLGIYQKGLLLLAGNTNRFGYIGYKSVSRKSIGSSAVMALTQDTQ
GTVWVGTDSDGLFALPATSNASVHYLTDKEGGTAPSNILTIHEDSQKNLWLGSYLTGLSR
FDRNTGKSTYIDKLVDKRGDNVQRVFSIKEDARQRLWIGTMGSGVFQLDLRSGAVKNFEA
LPGKLYRPELNYIPNSWINCLLVTKDNKLFIGTFDGLGCLDLDTENFVSTLGTNRLMAGT
VVYSLYEDNKGNLWIGTSQGLKKMNRSTKEITSFDADQGLPGNFIWAIQGDKMGDLWLST
NRGLSKMDVDSSTFTNFYSSDGLQGNEFSRGASLNTSSGELFFGGVNGISYFKPDEVRVA
NKRLTVRIVDLFIRDKPVKKGMLSGSFQVVDTTVTNATEFNLAHHDNSFTLEFSTMDFID
AERVAYQYSINNNDWEELRPGSNRLTFDNLSPGRYEFQLRAKFNSAVSEIRQVTVIVHPV
WYLSTWAKLVYALLFLLLGILIARIIKNRRQAKAEFLAHQRQEEINEAKLQFFINIAHEI
RTPLTLVVSPLQKLITTDQNEERGHLYDIMGRNTKRILDLVNQLMDIRKIEKGQMTLQLA
QIEMTRFTKEVCQLFEEQILSKQIQFILDVPPERIFARIDPQNFDKVLINVLSNAFKFTP
SGGTIRVALTVGHSETADSQPDLAIAIEDSGHCISEPETERIFECFYQSEEHRGYNQQGT
GIGLHLVKQLVELHGGSIKAENMDPVGCRFLITLPLESAVDETAAPVAGLPVGHHQLPEL
AENGQTEVKSRKKARRIVIADDDTEICHYLTDELSGEYTIFAYANGEDAYKGIVREKPDL
VVSDVMMPVMDGMALCRKLRANPLVNHIPVILLTAKTEESSNALGFELGADAYITKPFNI
DILSKTIKSLIRNRQIILNNESEQQYQEEFISKVSIKSADTKLLEKVHALINKNLSNPDL
SVEMIAGEIGISRVHLHRKLKELTNSTTRDLIRHIRLKQAADLLTTKGLTVSEVAFATGF
ANVNNFSVSFKELYGVSPAHYAEQQLVKH
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgctctttaaacgtttactagttctcctttggctgtggtggccatgcatcgtttcaggc
cagtcgggtaagctgttcacggtcgaaacgggcctgtcgggcagtctggtcacggacatc
catcaagaccagagtggctttgtctggatagccaccgaagacggattgaaccgattcgac
gggataaaattcacggtctaccagcacagcaaaaaagatacgaccagcctgctgaacaac
cagattcatgcgctctttgccgacaaaagcgggcgcatgtatgttggctccaccgaaggg
ctccaatattacgacccggccaccgatgccttccacaccataccgctaaaactgcccaac
gggcaatcgatcaacgccagtgtgtcgaccctgtgccagcgaaaaaatggcgatgtgctg
gtgggcacctccggtcacggcaccttcaaactaatccgaaagggccccctcttgtttggc
cggaaagtactggcaaatgcgcccagcgaaataattatcaggattctggaggataccgag
caaaatctctgggtatcgacggaagataagggcctctatcgattcagcggccagtcggtg
aacgcgtatttcgtatccaagaaatcgcagaacaacatcatcagcagcatctgccaggat
cgttatggacggctgtttgtgggcaacatgagcagtggtttgtaccgctacgacccggcc
agtaacaccttcctgtcgattccttacaacgggcgcaccgacctgccggtggccgatctg
ctcgtcaatcgaaacaatcagatcgttgtggccaccagcgggaaaggcatgaagtatttc
gatccggtgtccgacaaaattctggacctggaatccagcgtgaccagcttcgatttttcg
cgaaccaaagtgaacaccatgctggaagatcaggccggtaacatctggcttggtatttat
cagaaaggcctgctgctgctggcgggtaacaccaaccgcttcgggtatattggctacaaa
tcggtgagtcgcaagtcgattggatcgagtgccgttatggctctgacgcaggatacgcag
ggaaccgtttgggtaggcaccgacagcgatggcctgtttgccttaccggccaccagcaac
gccagtgttcattacctgacggataaggaaggcggtacggccccatcgaacattctgacg
attcacgaggactcccaaaaaaatctgtggctcggctcgtacctgacgggcttgtcccgc
ttcgatcgcaacaccgggaaaagcacctacatcgacaagctggtcgataaacggggcgac
aacgtacagcgtgtgttcagtattaaggaagatgcccgccaacggctttggatcggcacg
atgggttccggtgttttccagctggacctacggtcgggggcggtcaaaaactttgaagcc
ttacccggcaagctctaccggcccgaactcaactacattccgaacagctggatcaactgc
ctgctcgttacgaaagacaataaactattcatcggcaccttcgacgggctgggctgtctg
gacctcgacaccgaaaatttcgtatctacgctgggtacgaatcggttgatggccggtacc
gtcgtgtactcactctacgaagacaataagggcaatttgtggataggcacgtcgcaggga
ctgaaaaaaatgaaccgttcgacgaaggaaatcacctcgttcgacgcggaccagggctta
cccggcaacttcatctgggccatacaaggtgataagatgggcgatctctggctcagcacc
aaccggggactttcgaagatggatgtcgactccagcacgttcactaatttctattcctcg
gatgggctgcaggggaatgaatttagtcggggagcctcgctcaacaccagcagcggggag
ttgtttttcggtggcgtgaacggcatttcctatttcaagcccgacgaagtccgcgttgcc
aacaagcggctgacggtgcgaatcgttgacctgtttatccgagacaaacccgttaagaag
ggaatgctgtcgggcagtttccaagtggtcgataccaccgttacgaacgctaccgaattt
aatctggctcaccatgataactcgtttacgctggaattctcgaccatggatttcatcgat
gctgagcgggtagcctaccaatattcaataaacaacaacgattgggaggaattaagaccc
ggttctaaccggctaaccttcgataatctgtcgccgggccggtacgaatttcagctacgg
gcaaaattcaacagcgccgtttcagagattcggcaggtaacggtcatcgtccatccggtc
tggtatttatcgacctgggctaaacttgtttacgcgctactcttcctgttgctgggtata
ctgattgcccgaattatcaaaaaccggcgacaggcaaaagcggaatttctggcgcaccag
cgtcaggaagaaatcaacgaagccaagcttcagtttttcataaacatcgcccatgagata
cggactcccctaacgctggtggtcagtccgctgcaaaaactcattactaccgatcagaac
gaggaacgcggccatctgtacgacattatggggcgtaacacaaaacgaatactggatctg
gtgaaccagctcatggacatccggaaaattgagaaggggcagatgacgctgcaactcgcc
cagattgagatgacccggtttacgaaagaagtttgtcagctttttgaggaacagattctt
tcgaaacaaattcagtttatcctggacgttccgccagagcggatttttgcccgcatcgac
ccgcagaatttcgacaaagtactgatcaatgtattgtccaatgcgttcaaatttacccct
tctggcggcacgatccgggtggcgctgaccgtgggccattctgaaacggcggatagtcaa
cccgatttagcgattgccatcgaagattcgggacattgcatcagtgagccggagaccgaa
cgaatattcgaatgtttttatcaatccgaagaacaccgggggtataatcagcagggtacg
ggcattggtctccatctggtaaagcaactggttgagttgcacgggggcagcatcaaagcc
gaaaatatggacccggtcggttgtcgttttctgatcaccttaccgctcgaatcggctgtt
gacgagacagcggcaccggtggcaggattgcctgtcggccatcaccaattgccggagttg
gcagagaatggccagaccgaagtgaaatcccggaagaaagcccgtcgtatcgttattgcc
gacgacgacacggagatctgccattacctcacggatgaattatcgggcgagtacacgatt
tttgcctatgccaatggcgaggatgcgtataaaggaatcgtgagagaaaaacccgatctg
gtggtcagtgacgtcatgatgccggtaatggacggaatggccctctgccgaaagttgcgg
gcaaatccactggttaaccacatacccgttattctgctgacggccaaaacggaggagtcg
agtaatgcactgggatttgaattaggagccgacgcttacatcaccaaaccgttcaacatc
gacatactgtcgaaaacaattaaaagcctgatccgaaatcggcagatcatcctgaacaat
gaaagcgagcagcagtatcaggaggagttcatttcgaaggtcagtatcaaatccgccgat
acaaagctcctggaaaaagtacacgccctgatcaataaaaacctgtctaaccccgactta
agtgtcgagatgattgccggtgaaattggtataagccgggtacaccttcatcggaaatta
aaagagttgacaaactcgacaacgcgggatttaatcaggcatatccgactaaaacaggcg
gctgatctgctgactacgaagggattgacggtttcggaagtcgcctttgccacgggcttt
gcgaatgtgaataacttttcggtgtccttcaaagaattgtacggtgtatcgcccgctcac
tatgccgaacaacagttggtaaaacattga
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