Spirosoma linguale: Slin_2266
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Entry
Slin_2266 CDS
T01156
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
sli
Spirosoma linguale
Pathway
sli00300
Lysine biosynthesis
sli00470
D-Amino acid metabolism
sli00550
Peptidoglycan biosynthesis
sli01100
Metabolic pathways
sli01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Slin_2266
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Slin_2266
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Slin_2266
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Slin_2266
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Slin_2266
Enzymes [BR:
sli01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Slin_2266
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Slin_2266
Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Precursor biosynthesis
Amino acid ligase
Slin_2266
Racemase
Slin_2266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Motif
Other DBs
NCBI-GeneID:
8726007
NCBI-ProteinID:
ADB38287
UniProt:
D2QEN5
LinkDB
All DBs
Position
complement(2745690..2748197)
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AA seq
835 aa
AA seq
DB search
MLTKEFQLTNRHWFTDSRQVTGHAADSLANEAVFFAILGEHHDGHAFIGDLYRKGIRQFV
IERSALTPERREELATYADAQFTKVDSSLQTLQTLAAEHRRQFRIPVIGITGSNGKTIVK
EWLAQLLADEYVIARSPKSYNSQLGVPLSVHQLNESHTMAIFEAGISQTQEMQALEAIIR
PTIGIFTNIGTAHDQGFRTRKQKVAEKLRLFIHAGTLIYCTDYADIDEEVNLLLKAVNPD
MRFITWSLTGQKATYQGRIAGNQVSLTGKNTGFDQPLTLPFTDPASVENLMHCLVTMLSL
RTWSAAELQSRLNRLRPVSMRLEQKEGINNCELIDDSYNNDMVGLQLALRFLNQQGTRSR
RIVILSDVLQTGQPEAEFYEQVGNLMRANEVGQFIGIGPVVSRNKLFFADGSQFFATTEE
FLAQFSFSELRDSTVLVKGARPFSFERIVHRLERKVHGTVLEINLDALTHNLNYYRERIS
RNDGPSETKIMVMVKAFAYGSGSAEVAQLLQFHRVDYLAVAYADEGVSLRQNGVDLPIMV
MNPAPETFSTLLEYKLEPEIYSLRLLREWEEFLRSREHAFANTQSTTYPIHLKIDTGMHR
LGFLERELTVVTDFLKRQPNLHVATVFSHLVGADDAQFNPFSRQQYETFLRCTEFLGAEL
GYMPTRHLLNSAGIVRFPDYKLDMVRLGIGLYGVEATGTEQSALQTVGTLRTIVSQIKTV
GAGESVGYSRRGVLDHDARIATLAIGYADGYDRRLGNGVGNVWVNGSYCPTVGSVCMDMT
MIDVTNASVSEGDEVLIFGPELPITELARRIGTIPYEILTGVSERVKRVFFKEGN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaagaatttcaactgacgaaccgtcactggtttaccgattcaaggcaggta
acggggcatgcagcggattcgctggcaaacgaggctgttttcttcgccattctgggcgag
caccacgacggacacgcgttcatcggcgatctgtaccgcaaaggtattcgccagtttgtt
attgagcgatcagcgctaacccccgagcgacgggaggagctggcaacctatgccgatgct
cagtttaccaaggtcgacagcagtttacaaacgctgcaaacgctggctgctgaacaccgc
cggcagtttcgtattccggttatcggcattaccgggagtaatggaaagacgattgtaaaa
gaatggctggcgcagctcctcgccgatgagtatgtgattgcccggagtccgaaaagctac
aattcgcagttaggcgtaccgctgtctgtgcatcagctgaacgagagccataccatggcg
atttttgaggccggtatttcgcaaacccaggaaatgcaggctctggaagccataatccgg
cctaccattggcatctttacgaacataggcaccgcccacgatcaaggcttccgcacccga
aagcagaaagtggccgagaaactccggctctttattcatgccggtacgcttatttactgc
acggactacgcggacatcgacgaggaagtaaacctactgctgaaggccgttaatcccgac
atgcggttcattacctggtcgttaacgggtcaaaaagcgacttatcaggggcggattgcg
ggcaatcaggtcagtcttacgggcaagaacaccgggtttgatcagccattgaccctgcca
tttacagacccggcttcggtcgaaaacctcatgcactgcctggttacgatgctgtcgcta
cggacctggtcggctgctgaactgcaaagtcgcctgaatcgattgaggccagtgtcgatg
cggctggagcaaaaagaaggtatcaacaattgtgagttgatcgacgattcgtacaataac
gacatggttggcctgcaactcgcccttcggtttctgaatcagcagggcacccgcagccga
cgcatcgtcattttgtcggacgtgttgcaaacgggccagcccgaagctgagttttacgag
caggtggggaacctgatgcgggccaatgaagttgggcagttcattggtattggaccggtc
gtaagccgaaacaagctgtttttcgccgatggcagtcagttcttcgcaacaacggaggag
tttctggcgcagttttcgttcagcgagcttcgcgacagtaccgttctggtgaaaggagca
aggccattctcgttcgagcggattgtacaccggcttgagcgtaaagtacacggaacggtt
ctggaaatcaatctcgacgcgctgacgcataatctgaactactaccgcgagcgcatcagt
cggaatgatggcccgtctgaaacgaagattatggtgatggtcaaggcatttgcctacggc
agcggcagcgccgaagtggcgcaactgctacagtttcaccgggtcgattaccttgctgta
gcctatgccgacgaaggggtatcgctccggcagaatggcgtcgatttgccgataatggtc
atgaatcccgctcccgaaaccttttccaccctgctggaatataagctggaacccgaaatt
tacagcctgcggcttctgcgggaatgggaggagtttttaagaagccgggagcatgcattc
gcgaacacacagtcgacaacgtatcccatccacctcaaaatagataccggaatgcaccgg
cttgggtttctggagcgtgagctgacggtcgtgaccgactttctgaaacgccagccaaac
ctgcacgttgccaccgtattcagtcatctggtgggagccgacgatgcccagtttaatccg
ttttcccgacagcagtacgaaaccttcctgcggtgtaccgaatttttgggggcagagctg
ggctacatgcccacgcgtcatttgctaaactcagcgggtattgttcgtttccccgattat
aaactggacatggtgcggctgggcattggcttgtacggtgtcgaagcaaccggtaccgag
caatctgccctgcaaacagttggcaccctgcgtactattgtcagccaaattaaaactgta
ggggcaggcgagtcggttgggtatagccgccggggagtgctggaccatgacgcccgtatt
gcgacactggcaattggttatgcagatgggtacgaccgtcggctgggtaatggcgttggg
aatgtgtgggtcaatggaagctattgtccaaccgttggaagtgtctgcatggacatgacc
atgatcgatgtgacgaatgcatcggtcagcgaaggggacgaggtacttatttttggccct
gagcttcccattacggaactggcccggcgcattggaaccatcccgtacgaaattctgacc
ggcgtaagtgagcgggtcaagcgggtgttttttaaggaaggcaactaa
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