Spirosoma linguale: Slin_4206
Help
Entry
Slin_4206 CDS
T01156
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4206
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_4206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
MetallophosN
Motif
Other DBs
NCBI-GeneID:
8727965
NCBI-ProteinID:
ADB40191
UniProt:
D2QKM5
LinkDB
All DBs
Position
5065280..5068351
Genome browser
AA seq
1023 aa
AA seq
DB search
MRKLLQIGFLILITVWATYAQGQAVSGRVTSSDDGNPLPGVSVSVKGTTQGTLTDASGNY
RINAGNNAVVVFSFIGFTTQEEKVANRSEINVQLKTDVRNLSEVVVTGYGQQIKRDLTGN
IAKVKAADIQDQPVTTFDQALQGKAAGVQINSGSGKLGQGIQVRVRGQSSVSASNQPLYI
IDGIPVTTDNLSITSSATNPLADINPQDIESVDILKDASAGAIYGARAANGVVLITTKRG
KAGRTNVNFGAQYGSSKPTRKLEFLNTEQYVKFYNQAAANSDRIEGLDPSDPDSYTTYMK
DFYQTQGLGTYGTSNQASTNWGDLAYQDAPYQQYDLNLNGGNEKTTFYLSGQLLDQKGIL
VGNALQRYAGRLNIEHQVSSRFKAGFNMGLTRTLNQRISGDNQFDNPMQMVALPPMTPAT
DATTGLPVGSPPGDISIPVYYNPLINIGNAYFNTTVYRNISNVFGQLQIMKGLTFRTEFG
LDVLNQQEELYYNSKTQRNFGSPLGLGRNRFARVENYTTNNFFNYSTAFGRSNLDATVGM
SYQQSQQKTNFTEGRDFPSDAYRMIASAARKTDGSSSQTDYRFLSYFARANYKFADRYLL
GVSARVDGSSRFGNNSRYGFFPSVSAGWVLSEEGFMKNTTAISFLKLRASYGQTGNAEIP
NFPQLGLFTGDAGYGTLPGQRPSQLANPDLKWETTNQFDIGIDFGILNNRINGEIDYYNK
QTSGLLLNVNVPGTTGFATQFRNVGSLENKGVEIVINTENLTGAFRWTTSFNAATNQNKI
NNLQGQIIEGGINAMSRAVEGQPLGVYFTQEYAGVDPANGDALWFKNTTNTDGTIDRSTT
KTYNQAQRVVAGSPLPKWTGGITNTFSYKGFSLSVLFNGVFGNKINFYGVGRYSSANGRF
EDNQTVNQLAAWTKENPNTNVPEARLFYNNGAQSSSRFILDGSFVRLRTATLSYSLPKTL
VNRVKMNSVRLFVTGQNLLTFTNYAGWDPEVNADYIVSNIAQGYDFYTAPQARTITGGIN
IGF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattactacaaattggtttcctgattttgataaccgtatgggcaacctacgca
cagggtcaggccgtttcaggcagagttacatcatcagacgacggtaatcccctacccggc
gtatctgtcagtgtcaaaggaacgacacagggaacgttaaccgatgcctccggtaactac
cgcattaacgcaggtaacaacgcggtagtcgttttcagctttattggcttcacgactcag
gaagaaaaggtggcgaatcggtcagaaatcaatgtccagttaaaaaccgatgtacgtaac
ctgagtgaggttgttgtaacaggttacgggcagcagatcaaacgggacctaaccggcaac
atcgcgaaagttaaagccgccgatattcaggatcagcccgtaacgaccttcgatcaggca
ttacagggcaaagcggccggcgttcaaatcaattccggctccggcaaactgggtcaggga
atacaggttcgggtacggggccagtcgtcggtatcggcatcgaaccaaccgctttacatc
atcgacggtattcccgtcacgacagacaacctaagtatcaccagttcagccaccaatcct
ttggccgatattaaccctcaggatattgagtcggtcgatattctgaaagatgcgtcggcc
ggagctatttacggtgcccgggcggccaatggtgtcgtgctgattaccaccaaacgcggc
aaagccggacgtaccaacgttaatttcggtgctcagtacgggtcaagcaagccaacccgc
aagctggagtttctgaatacggaacagtacgttaagttttacaatcaggcagcggccaat
tccgaccgaattgaggggctagatccgagcgaccctgactcgtataccacgtatatgaag
gatttctaccagacgcagggattaggtacctacggcacgtctaaccaggcaagtaccaac
tggggtgatctggcctatcaggatgccccctatcagcagtatgatctgaacctgaacggt
ggtaacgaaaaaacgacgttttacctctcgggccaactgctggatcagaaaggtattctg
gttggtaatgccctgcagcgctatgccggccgtctgaatatcgaacaccaggtatccagc
cggttcaaagcaggctttaacatgggactgactcgtactctgaaccaacgcatctcgggc
gataaccagttcgataaccccatgcagatggtggccctgccgccaatgacacccgcaacg
gatgccacaacggggctccctgtgggctcccctcccggcgacatcagcattccggtttac
tacaacccactcattaacatcggcaatgcgtatttcaacaccaccgtttaccggaatatc
agcaatgtatttgggcaattgcagattatgaaaggcctaacgttccgaacagagtttggc
ctcgatgtactgaatcagcaggaagagttgtactacaacagcaaaacgcagcggaacttt
ggctcaccgctgggcctgggccggaaccgtttcgcccgggtagaaaactatacgacgaac
aacttcttcaattattccaccgcttttggccggagtaacctcgacgctacggtggggatg
tcgtatcagcaatcgcagcagaaaacgaacttcaccgaaggccgggatttcccgtctgat
gcttaccggatgattgccagtgcggcccgcaaaaccgacggtagctcgtcgcaaacggat
taccgcttcctgtcttactttgcccgcgccaattacaaatttgccgaccgctacctactt
ggtgtgagtgcgcgggtagacggttcatcccgctttggtaacaacagccggtatggcttc
ttcccatctgtttcggcaggctgggtgcttagtgaggaggggttcatgaaaaacacaacg
gctatcagcttcctgaaacttcgggccagctacggccagacgggtaatgccgaaattccg
aatttcccgcagttgggtctcttcaccggcgatgccggctatggtacgctgcctggtcag
cgcccatcgcagttggccaaccccgacctgaaatgggaaacaaccaatcagttcgacatt
ggtatcgactttggtattcttaacaaccgcatcaatggcgaaatcgactattacaacaaa
caaacgtcgggtctgctgctcaatgtaaacgtgccgggaacgacaggctttgccacgcag
ttccgcaacgtaggcagcctcgaaaacaagggggtcgaaattgttattaataccgaaaac
ctgacgggtgctttccgctggacaacgagcttcaacgcagctacgaaccagaacaagatc
aacaacttacagggccagattatcgaaggcggtatcaatgcgatgagtcgtgcggtagaa
ggccagccactgggcgtttatttcacgcaggaatatgccggtgttgatccggccaatggc
gatgctctttggttcaaaaacaccaccaataccgacggtactattgaccggagcaccact
aaaacctacaaccaggctcagcgggttgttgctggtagcccgttacccaagtggacgggt
ggtattaccaacacgttcagctacaaaggtttctcactgagtgtactgttcaacggtgtt
tttggcaacaagatcaacttctacggtgtaggtcgctactcatcggccaacggtcgtttc
gaggataaccagacggtcaaccagttggcagcctggacgaaagagaaccccaacaccaac
gttccggaagcccgtctgttctacaacaacggtgcccagtcgtccagccgtttcattctt
gatggttcattcgttcggttacgtacggctaccttatcttactcgctgcccaaaacgctc
gttaaccgggttaagatgaatagcgtccgtctgttcgttacaggacaaaacctgctaacg
tttaccaactatgccggatgggaccctgaagtcaacgccgactacattgtgtcgaacatt
gcgcaggggtacgatttctacacggctccccaggcacgcaccattacgggcggtattaac
attggtttctaa
DBGET
integrated database retrieval system
