Streptomyces liangshanensis: HA039_17600
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Entry
HA039_17600 CDS
T07519
Name
(GenBank) PAS domain-containing protein
Organism
slia
Streptomyces liangshanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
Apolipoprotein
PAS_7
BLOC1_2
HisKA
PAS_10
CCDC90-like
Nup54
Motif
Other DBs
NCBI-ProteinID:
QIQ03899
UniProt:
A0A6G9H0T6
LinkDB
All DBs
Position
complement(4086051..4091060)
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AA seq
1669 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDGLVLVNANGTVVNANTIALEMFETPGTALVGRGLLDLLP
EFDSKLIPGSMRRPDSADSRGRTKPTRMVARRTDGGEFPAEVTSASLEDGRDAYTDSHSY
TGDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRVVLVNPAAAQI
LGFRATDLGGRELHTLILHSRADGEPFPYADSPLADTLRSGRKHRVRGQVLWAKNGKQVP
VDLTTAPVRDGDQLVGAVMTFTDRRAHEELVDQHDAELAEAKKKHEAELAEATERLTAEL
AKVKKRLTGELAETTERLTTELNEATERHTAELADRSDRYAAEIEELTERYGEVAARHAQ
LTAVLGEALRGPLEELRGELATLAADPAGQLWPEANQILHHLAAGYARMTTLVDNVLGYQ
RLDDGTEGLAKANVLLDGVVAAGVEGAVELIGPGRAQFAVHAPPIEAEVDPGRLAQALAH
LIADVAGVDSTGRARLVAGGGGYVDSTIVVAAAQRGDVVRIEVRGPFAGGDPVHEPLVRG
IVRAHGGVLQTHEMPGMGGSAYVLELPLGEGAGTIPTVPAPAAVPAMSAELSVHGAPGST
DPVGPGGSADQAGSAGSVGLPPGQAAVPAQQGSGTAGGGRRRARRASTDAFLEAAVPEVP
DAGEPTGRRRARNDAQQERIPAQAQDSAAHGGHGVHGGHAGDGAPGAEDGTGGGNGPVGG
SGNGGTGRRRGRPSPGEDAGVVGGPGVVTGGTAGPAGPAGVPGGPAGASPPASAGSEVAP
GAAIALSGGSGGQGGPAGTPSGVPSEGAVVTSAEGSHPTGRAALGQAVPPQGVPVDAASA
AGTGRRARHGGQNAMPALPAGPTPTGPTPNGPAPSGPSAPLAPPAPSAPSAAGPTGPVPH
AAVPGGMPAPLPVPHQAPPAAPAAAAPNAGRRARRALAPAQERHTPVPPEPEGGRSQFAL
PPADADRAPAPAGPPAPARGLPAAAAPDDSLPGRHPGAVQQDAVQQDAVQQTAGPSGRRR
ARREVGSGADDSMEMPVQLDTGAMSFDPNGNQWGAPPEADHSPGTGTAAGAGAGQGGLGQ
GLGNGPVPHGQDSPATPSGFGPMVGPPGWPDDPRPVQDTAGGQGLMAAHGTDPNGTDADT
GGVPAGPPATDPAADHPTATESAAAPPARRGAHQPLPPAQPLPEESPSPDSTQGRAFSVR
TLGQGVPFSPQQQQQPQPPGPATQGRGQSLVPGPVGRQGQVARPPAPSAAQAQAHAQAQA
HAQHQSQGQGQALQSQSQGQGQGLAQAHRQQQGQTPGPQQGQGQGQAPGLAQPQAQPQPQ
AHTQGQGQGQHQGQAPGDTQGGQGGQTGGTLGSGRRRKLGTPPDSDHSEANQRSHPQGSS
RLATAHPEGRSYAIGAPDEGAEGPQPLDGPGGAVEVANRPQPRPVDDELPPEPLDNPRRL
LVWPAPDVSTSQALSDRGYRPVVVHSREEVDAQIAAFPAALFVDPLTGPITRTALQSLRQ
AAVAAEVPVLVTAGLGQATREAAYGADPAVLLKALAPRDSEQHPPRVLLVEEHDEIALAL
TDTLERRGMQVARAATDDQAVALAGQMRPNLVVMDLMRVRRQRAGIIDWLRANGQLNRTP
LVVYTSTGIDPAELPRLSSGETVLFLAERSTSDEVQARIVELLAKIGTN
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagcaggccatcccggggcgctgctcgtctcgcggcgatactcgacgcactcccc
gacggcttggtgctcgtcaacgccaacggcaccgtggtcaacgccaacaccatcgccctg
gagatgttcgagacccccggcaccgccctcgtcgggcgcggcctcctcgacctcctcccc
gagttcgactccaagctcatccccggctccatgcgccggcccgactccgccgactcccgg
ggccgtaccaaaccgaccaggatggttgcgcggcgcaccgacggcggcgagttccccgcc
gaggtgaccagcgcgagcctggaggacggccgggacgcgtacaccgactcccacagctac
accggcgacgagctgctcatgctggtcgtacgcgacctgtccggcacggtcgacaccgag
gccgaactggcccgttcccagcgccagaccgagatgatcctgcgggccgcgtcggaaggc
gtggtcggtacggacacggacggccgggtcgtcctcgtcaaccccgccgccgcccagatc
ctcggcttccgcgccaccgacctcggcgggcgcgagctgcacaccctgatcctgcactca
cgggcggacggcgagccgttcccgtacgcggactccccgctcgccgacaccctcaggtcc
ggccgcaagcaccgggtgcgcgggcaggtgctgtgggcgaagaacggcaagcaggtgccg
gtcgacctgacgaccgcgccggtacgggacggcgaccagctcgtcggcgccgtgatgacc
ttcaccgaccgccgcgcgcacgaggagctcgtcgaccagcacgacgccgagctggccgag
gcgaagaagaagcacgaggccgagctcgcggaggccacggagcggctcaccgccgagctg
gcgaaggtgaagaagcggctcacgggcgaactggccgagacgaccgagcgcctcaccacc
gagctgaacgaggcgaccgagcgccacacggccgagctggcggaccgcagcgaccgctac
gcggccgagatcgaggagctgacggagcggtacggcgaggtcgcggcccggcacgcccag
ctcaccgccgtcctcggcgaggccctgcgcggcccgctggaggagctgcgcggcgaactc
gccacgctcgcggccgacccggcgggacagctctggcccgaggccaaccagatcctgcac
cacctggccgccgggtacgcgcggatgacgacgctggtcgacaacgtgctcggctaccag
cggctggacgacggtacggaagggctcgccaaggcgaacgtcctgctcgacggggtcgtg
gcggccggcgtcgagggcgcggtcgagctgatcggccccggccgggcgcagttcgccgtg
cacgccccgccgatcgaggccgaggtggacccgggccggctggcgcaggccctcgcgcac
ctgatcgccgacgtcgccggggtcgactccacggggcgggcccggctggtggccgggggc
ggcgggtacgtcgactcgacgatcgtggtggccgccgcgcagcgcggtgacgtcgtacgg
atcgaggtgcgcggcccgttcgccgggggcgatccggtgcacgagccgctcgtgcgcggg
atcgtgcgggcgcacggcggggtgctccagacgcacgagatgccgggcatgggcggcagc
gcgtacgtgctggaactgccgctgggcgagggcgccgggaccatcccgaccgtgcccgcg
ccggccgcggtgccggcgatgtcggcggagctgtccgtgcacggggctccggggtcgacg
gacccggtgggaccgggcgggtcggcggatcaggcgggttcggcgggttcggtcgggctg
cctccggggcaggccgcggtgccggctcagcaggggtccgggaccgcgggcggcggcagg
cggcgggcacggcgggcgtccacggacgcgttcctggaggccgcggtgccggaggtgccg
gatgccggggagccgacagggcggcgccgggcgcgtaacgacgcacagcaggagcgcatc
ccggcgcaggcgcaggattccgccgcgcacggggggcatggagttcatggggggcatgcg
ggagacggtgcgccgggcgccgaggacgggaccgggggcgggaacgggccggtaggcgga
agcgggaacggcggtacggggcgtcggcgcgggcggccgagtcccggcgaggacgccggg
gtcgtgggcggaccgggagtggttacggggggtacggctgggcccgctggtccggctggt
gttcccgggggtcccgctggggcctctccgccggcctccgccggatccgaggtggctcct
ggggcggcgatcgccctctcgggcggttcgggcggccagggcggcccggcgggtacgcct
tccggtgtgccctccgagggagccgtcgtcacgtccgccgaggggtcgcacccgaccggg
cgggcggcgctcggccaggccgtaccgccgcagggtgtgcccgtggacgccgcctcggcg
gcgggaacgggtcgccgggcgcggcacggcgggcagaacgcgatgccggcgctccccgcc
ggtccgacgccgaccggccccacgccgaacggacccgcaccgagtgggccttcggcaccg
ctggcgcctcccgcgccctccgcgccttccgctgccgggccgaccggtcccgtacctcac
gcggcggttcccggcgggatgccggcgcccctgcccgtaccgcaccaggcaccgcccgcc
gcgccggcggccgccgcgccgaacgccgggcgccgtgcgcgccgggcgctcgccccggcg
caggagcggcacacgcccgtaccgccggagccggagggcgggcgcagccagttcgcgctg
ccgccggccgacgccgaccgcgccccggccccggccgggcccccggctcccgcgcgcggc
ctgccggccgcggccgcgccggacgactcgctgcccggccgccaccccggcgccgtacag
caggacgccgtacagcaggacgccgtacagcagaccgccggaccgtccgggcggcggcgg
gcgcgcagggaggtcgggagcggcgcggacgactcgatggagatgcccgtccagctggac
accggcgcgatgtccttcgacccgaacggcaaccagtggggggcgccgccggaagccgac
cacagcccgggcaccggaacggcagcgggagcgggagcgggacaaggcggcctgggccag
gggctcgggaacgggccggtcccccacgggcaggacagccccgcgacgccttccggcttc
ggcccgatggtcggcccgcccggctggccggacgacccgcgacccgttcaggacacggcg
gggggccaaggcctcatggccgcgcacggtacggacccgaacggtacggacgccgacacc
ggcggcgtaccggccgggccgcccgccaccgatcccgcggccgaccaccccaccgccacc
gagtcggccgccgcgccgcccgcgcggcgcggcgcgcatcagccgctcccgcccgcccag
ccgctgcccgaagagtcgccgtcgccggactccacccaggggcgggcgttcagcgtgcgg
acgctcggccagggcgtgccgttctcgccgcagcagcaacaacaaccgcagccgcccggc
ccggccacgcagggccgcgggcagagtctcgtaccgggcccggtcggccggcaggggcag
gtggcccggccgccggctccctccgcagcccaggcccaggcgcacgctcaggcccaggcg
cacgcccagcaccagagccaggggcagggccaggccctccagagccagagccagggacag
ggtcaaggcctcgcccaggcacaccgacagcagcaagggcagaccccgggaccgcagcag
gggcaggggcaggggcaggccccgggcctcgctcagccgcaggcacaaccgcagccccag
gcccacacgcagggccagggccagggccaacaccagggccaagcccccggagacacccaa
ggcggccagggaggccagaccggcggcaccctcggttccggccgccgccgcaagctcggc
accccgcccgacagcgaccactccgaggcgaaccagcggtcccacccgcagggttcgtcc
cgcctcgccaccgcgcaccccgagggacgttcgtacgcgataggcgcacccgacgagggc
gccgagggaccccagccgctggacggtcccggcggcgcggtcgaggtggccaaccgcccc
cagccgcggcccgtcgacgacgaactccccccggagcccctcgacaacccgcgccggctg
ctcgtctggcccgccccggacgtctccacctcgcaggcgctgagcgaccgcggctaccgc
ccggtggtcgtgcactcgcgcgaggaggtcgacgcgcagatcgccgcgttccccgccgcg
ctcttcgtggacccgctgaccggccccatcacccgtaccgcgctccagtccctccgccag
gccgccgtcgccgccgaggtccccgtgctggtcacggccggtctgggacaggcgacgcgg
gaggcggcgtacggcgcggaccccgccgtactcctcaaggccctggccccgcgcgacagc
gaacagcacccgccgcgcgtcctgttggtcgaggagcacgacgagatcgccctcgcgctg
acggacacgctggagcggcgcggcatgcaggtcgcgcgggccgccaccgatgaccaggcg
gtggccctggccgggcagatgcggccgaacctggtggtcatggacctgatgcgggtacgg
cgccagcgcgccgggatcatcgactggctgcgggcgaacgggcagttgaaccgtacgccg
ctggtcgtctacacctccaccggcatcgacccggcggagctgccgcggctgtcgtcgggc
gagaccgtgctgttcctggcggaacggtccacgagcgacgaggtgcaggcccggatcgtg
gaactgctcgcgaagatcgggacgaactga
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